Pre_GI: BLASTP Hits

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Query: NC_010067:3056774:3071809 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 3071809, End: 3072162, Length: 354

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:4677412:468401946840194684312294Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein9e-47185
NC_013716:3512950:352107335210733521366294Citrobacter rodentium ICC168, complete genomehypothetical protein3e-43173
NC_012962:3864000:387315338731533873449297Photorhabdus asymbiotica, complete genomehypothetical protein9e-1062
NC_012731:560199:582356582356582757402Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-0857
NC_004547:639726:654256654256654528273Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein5e-0753.1