Pre_GI: BLASTP Hits

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Query: NC_010067:2881448:2893102 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 2893102, End: 2894100, Length: 999

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:25569:3312133121341251005Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulator2e-172605
NC_011274:25692:3325233252342561005Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator2e-172605
NC_011205:25805:3336533365343691005Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853transcriptional regulator2e-172605
NC_011149:25760:3336633366343701005Salmonella enterica subsp. enterica serovar Agona str. SL483,putative transcriptional regulator3e-172604
NC_011080:25751:3335733357343611005Salmonella enterica subsp. enterica serovar Newport str. SL254,putative transcriptional regulator4e-172604
NC_003198:25807:333683336834363996Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator (lysR family)5e-172603
NC_004631:25807:333683336834363996Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative transcriptional regulator (lysR family)5e-172603
NC_006511:25796:333573335734352996Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator (lysR family)5e-172603
NC_011147:25836:333973339734392996Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator5e-172603
NC_016832:25807:333683336834363996Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,LysR-family transcriptional regulator5e-172603
NC_016831:25760:3336533365343691005Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator (lysR family)4e-172603
NC_011094:25762:3336833368343721005Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator1e-171602
NC_016810:25803:3336433364343681005Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator (lysR family)1e-171602
NC_016856:25803:3336433364343681005Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator1e-171602
NC_016857:25803:3336433364343681005Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator1e-171602
NC_016863:25804:3336533365343691005Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator1e-171602
NC_017046:25758:3336433364343681005Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator (lysR family)1e-171602
NC_016860:25758:3336433364343681005Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator1e-170599
NC_003197:25803:3336433364343681005Salmonella typhimurium LT2, complete genomeputative transcriptional regulator1e-170599
NC_016612:2223357:223449122344912235438948Klebsiella oxytoca KCTC 1686 chromosome, complete genomeregulatory protein4e-52205
NC_007952:3196085:322589732258973226814918Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, LysR family2e-1686.7
NC_010524:4402478:442545844254584426423966Leptothrix cholodnii SP-6, complete genometranscriptional regulator, LysR family2e-1583.6
NC_012724:147454:164392164392165333942Burkholderia glumae BGR1 chromosome 1, complete genomeTranscriptional regulator, LysR family protein4e-1479.3
NC_014641:20103:410434104341975933Achromobacter xylosoxidans A8 plasmid pA81, complete sequenceHTH-type transcriptional activator NahR 31e-1274.3
NC_015381:1705383:170681117068111707734924Burkholderia gladioli BSR3 chromosome 1, complete sequence5e-1272.4
NC_020209:1986503:200880320088032009744942Pseudomonas poae RE*1-1-14, complete genomeLysR family transcription regulator protein7e-1271.6
NC_015138:201323:211862211862212773912Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator2e-1170.5
NC_008752:166877:1820701820701833681299Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, LysR family2e-1170.1
NC_018691:4619245:462260946226094623520912Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator, LysR family3e-1169.3
NC_010581:2999002:299900229990022999895894Beijerinckia indica subsp. indica ATCC 9039, complete genometranscriptional regulator, LysR family3e-1169.3
NC_006569:370846:381777381777382751975Silicibacter pomeroyi DSS-3 megaplasmid, complete sequencetranscriptional regulator, LysR family4e-1168.9
NC_010625:1602191:162819216281921629166975Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetranscriptional regulator, LysR family6e-1168.6
NC_010505:5035668:504944150494415050385945Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, LysR family2e-1067
NC_009512:3068495:307157930715793072511933Pseudomonas putida F1, complete genometranscriptional regulator, LysR family2e-1067
NC_014012:1421979:142218014221801423097918Shewanella violacea DSS12, complete genometranscriptional regulator, LysR family2e-1067
NC_017986:5467279:547918954791895480121933Pseudomonas putida ND6 chromosome, complete genomeLysR family transcriptional regulator2e-1067
NC_011894:585637:603301603301603588288Methylobacterium nodulans ORS 2060, complete genome2e-1066.6
NC_008322:641197:656469656469657314846Shewanella sp. MR-7, complete genometranscriptional regulator, LysR family4e-1065.9
NC_008541:2119883:213613321361332137020888Arthrobacter sp. FB24 chromosome 1, complete sequencetranscriptional regulator, LysR family4e-1065.9
NC_015733:2720183:273520827352082736122915Pseudomonas putida S16 chromosome, complete genomeLysR family transcriptional regulator8e-1064.7
NC_014623:1883259:189844618984461899354909Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeLysR family transcriptional regulator1e-0963.9
NC_015061:4203767:4223495422349542245111017Rahnella sp. Y9602 chromosome, complete genomeLysR family transcriptional regulator2e-0963.5
NC_020126:9938287:994969299496929950684993Myxococcus stipitatus DSM 14675, complete genomeLysR family transcriptional regulator2e-0963.5
NC_018678:87064:107354107354108277924Alteromonas macleodii str. 'English Channel 673' chromosome,LysR family transcriptional regulator2e-0963.5
NC_010172:5036385:504634750463475047306960Methylobacterium extorquens PA1, complete genomeLysR substrate-binding2e-0963.5
NC_017047:4298207:431741043174104318366957Rahnella aquatilis HX2 chromosome, complete genomeLysR family transcriptional regulator2e-0963.5
NC_004463:2158116:218239221823922183336945Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein3e-0962.8
NC_021066:4177217:418936241893624190264903Raoultella ornithinolytica B6, complete genomeputative transcriptional regulator5e-0962.4
NC_012988:5516872:553280755328075533766960Methylobacterium extorquens DM4, complete genomeLysR family transcriptional regulator5e-0962.4
NC_010557:679656:712468712468713370903Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, LysR family4e-0962.4
NC_008392:1029134:104404010440401044942903Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, LysR family4e-0962.4
NC_015138:272500:274941274941275930990Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator1e-0860.8
NC_015376:2241000:225434222543422255334993Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator MexT1e-0860.8
NC_016830:3230939:325379932537993254713915Pseudomonas fluorescens F113 chromosome, complete genomeprotein MexT1e-0860.8
NC_015379:3736500:373842937384293739343915Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family1e-0860.8
NC_020181:1317647:133611213361121337011900Enterobacter aerogenes EA1509E, complete genomeTranscriptional regulator2e-0860.5
NC_009439:1297851:130384013038401304802963Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator2e-0860.5
NC_009439:2427120:243460724346072435509903Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator3e-0859.7
NC_014311:3348102:336671533667153367680966Ralstonia solanacearum PSI07 chromosome, complete genomeHTH-type transcriptional regulator syrM 13e-0859.7
NC_002947:4167500:417027541702754171180906Pseudomonas putida KT2440, complete genometranscriptional regulator, LysR family8e-0858.2
NC_009656:4079319:408279240827924083724933Pseudomonas aeruginosa PA7 chromosome, complete genomeLysR family transcriptional regulator9e-0858.2
NC_021066:1778000:177836617783661779265900Raoultella ornithinolytica B6, complete genomeputative LysR family transcriptional regulator1e-0757.8
NC_008800:1300500:130568013056801306582903Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,LysR family transcriptional regulator2e-0757.4
NC_009439:3535152:354860435486043549542939Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator1e-0757.4
NC_007494:867901:873585873585874466882Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencetranscriptional regulator, LysR family1e-0757.4
NC_008781:2611702:262742326274232628379957Polaromonas naphthalenivorans CJ2, complete genometranscriptional regulator, LysR family1e-0757.4
NC_011958:923789:928653928653929534882Rhodobacter sphaeroides KD131 chromosome 2, complete genomeTranscriptional regulator, LysR family1e-0757.4
NC_015424:2316228:231775323177532318688936Aeromonas veronii B565 chromosome, complete genomeLysR family transcriptional regulator2e-0757
NC_008786:5128363:513497951349795135926948Verminephrobacter eiseniae EF01-2, complete genometranscriptional regulator, LysR family3e-0756.6
NC_015185:485866:506609506609507505897Desulfurobacterium thermolithotrophum DSM 11699 chromosome,transcriptional regulator, LysR family3e-0756.6
NC_008061:2368517:239821323982132399139927Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, LysR family2e-0756.6
NC_020181:1317647:131764713176471318570924Enterobacter aerogenes EA1509E, complete genomeTranscriptional regulator, LysR family2e-0756.6
NC_015968:2195645:222627322262732227205933Enterobacter asburiae LF7a chromosome, complete genomeLysR family transcriptional regulator2e-0756.6
NC_011283:785973:804836804836805735900Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator2e-0756.6
NC_002655:301940:323657323657324556900Escherichia coli O157:H7 EDL933, complete genomeputative LysR-like transcriptional regulator4e-0756.2
NC_011353:305820:327536327536328435900Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeLysR family transcriptional regulator4e-0756.2
NC_013008:306953:328848328848329747900Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLysR family transcriptional regulator4e-0756.2
NC_013941:338121:364629364629365528900Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeLysR family transcriptional regulator4e-0756.2
NC_008344:811386:821232821232822152921Nitrosomonas eutropha C91, complete genometranscriptional regulator, LysR family protein3e-0756.2
NC_017986:5833819:583514258351425836062921Pseudomonas putida ND6 chromosome, complete genomeNahR4e-0755.8
NC_013446:2919005:293064129306412931594954Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family5e-0755.8
NC_003296:262118:276258276258277172915Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTION REGULATOR PROTEIN6e-0755.5
NC_013446:2130021:214234221423422143295954Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family5e-0755.5
NC_011894:4066926:409482740948274095753927Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, LysR family5e-0755.5
NC_008782:3252092:325901532590153259920906Acidovorax sp. JS42, complete genometranscriptional regulator, LysR family5e-0755.5
NC_010162:3177324:318092931809293181384456Sorangium cellulosum 'So ce 56', complete genomeLysR family transcriptional regulator6e-0755.1
NC_015224:3191000:320949632094963210428933Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,LysR family transcriptional regulator7e-0755.1
NC_010159:1861465:188310218831021884031930Yersinia pestis Angola, complete genometranscriptional regulator LrhA8e-0755.1
NC_004460:1618892:163372816337281634660933Vibrio vulnificus CMCP6 chromosome II, complete sequenceTranscriptional regulator, LysR family1e-0654.3
NC_009436:3807420:381830238183023819228927Enterobacter sp. 638, complete genomeLysR family transcriptional regulator1e-0654.3
NC_015730:3662934:366653636665363667375840Roseobacter litoralis Och 149 chromosome, complete genomeHTH-type LysR family transcriptional regulator1e-0654.3
NC_007511:3512100:353444735344473535373927Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family1e-0654.3
NC_004463:2158116:218076621807662181758993Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein2e-0653.9
NC_014217:4550544:458732945873294588243915Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, LysR family2e-0653.9
NC_004129:3452885:348876534887653489682918Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LysR family2e-0653.9
NC_008314:2611873:262641726264172627310894Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, LysR-family2e-0653.5
NC_009997:2069894:208252920825292083422894Shewanella baltica OS195, complete genometranscriptional regulator, LysR family3e-0653.1
NC_016901:2070121:208311620831162084009894Shewanella baltica OS678 chromosome, complete genomeLysR family transcriptional regulator3e-0653.1
NC_013446:2961647:296904529690452969968924Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family2e-0653.1
NC_005140:340000:359000359000359944945Vibrio vulnificus YJ016 chromosome II, complete sequencetranscriptional regulator2e-0653.1
NC_014966:328056:347027347027347971945Vibrio vulnificus MO6-24/O chromosome II, complete sequencelysR-family transcriptional regulator2e-0653.1
NC_015727:1357095:137833313783331379250918Cupriavidus necator N-1 plasmid BB1p, complete sequenceLysR family transcriptional regulator3e-0652.8
NC_020211:103371:126887126887127789903Serratia marcescens WW4, complete genomeLysR family transcriptional regulator4e-0652.8
NC_010511:4258000:427139842713984272324927Methylobacterium sp. 4-46 chromosome, complete genomeLysR family transcriptional regulator4e-0652.8
NC_010338:588000:591892591892592821930Caulobacter sp. K31, complete genometranscriptional regulator, LysR family5e-0652.4
NC_004603:1464000:146748614674861468466981Vibrio parahaemolyticus RIMD 2210633 chromosome I, completetranscriptional regulator, LysR family4e-0652.4
NC_011186:515214:521813521813522745933Vibrio fischeri MJ11 chromosome II, complete sequencetranscriptional regulator, LysR family4e-0652.4
NC_016641:2291363:229276922927692293662894Paenibacillus terrae HPL-003 chromosome, complete genomeLysR family transcriptional regulator6e-0652
NC_015727:1357095:137410813741081374824717Cupriavidus necator N-1 plasmid BB1p, complete sequenceLysR family transcriptional regulator6e-0652
NC_016629:2449731:246234124623412463234894Desulfovibrio africanus str. Walvis Bay chromosome, completetranscriptional regulator, LysR family7e-0652
NC_016830:1645879:166486316648631665786924Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator8e-0651.6
NC_012796:3374911:338169533816953382615921Desulfovibrio magneticus RS-1, complete genomehypothetical protein9e-0651.2
NC_011566:4309151:4322502432250243235781077Shewanella piezotolerans WP3, complete genomeRegulatory protein, LysR1e-0551.2