Pre_GI: BLASTP Hits

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Query: NC_010067:191190:220377 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 220377, End: 221786, Length: 1410

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:2857699:2856293285629328577021410Salmonella enterica subsp. enterica serovar Choleraesuis strputative outer membrane efflux protein0848
NC_011083:2847318:2847318284731828487271410Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type I secretion outer membrane protein, TolC family0848
NC_012125:2826624:2838163283816328395721410Salmonella enterica subsp. enterica serovar Paratyphi C straintype I secretion protein0845
NC_011094:2791719:2791719279171927931281410Salmonella enterica subsp. enterica serovar Schwarzengrund strtype I secretion outer membrane protein, TolC family protein0843
NC_020063:1051310:1069391106939110707971407Enterobacteriaceae bacterium strain FGI 57, complete genometype I secretion outer membrane protein, TolC family0647
NC_014931:5470242:5483322548332254847371416Variovorax paradoxus EPS chromosome, complete genometype I secretion outer membrane protein, TolC family1e-49197
NC_013716:3109700:3136316313631631378121497Citrobacter rodentium ICC168, complete genomeputative outer membrane efflux protein of T1SS1e-33144
NC_020209:5077410:5098684509868451000361353Pseudomonas poae RE*1-1-14, complete genomeTolC family type I secretion outer membrane protein9e-1582
NC_009952:2217877:2221467222146722228371371Dinoroseobacter shibae DFL 12, complete genomeputative outer membrane protein tolC2e-1480.9
NC_015424:2695847:2707416270741627087411326Aeromonas veronii B565 chromosome, complete genometype I secretion outer membrane protein, TolC3e-1377
NC_008570:3013263:3029012302901230303401329Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeagglutination protein7e-1065.9
NC_015731:2400526:2412484241248424139291446Nitrosomonas sp. Is79A3 chromosome, complete genomeRND efflux system, outer membrane lipoprotein, NodT family2e-0964.3
NC_013889:1382705:1385254138525413867081455Thioalkalivibrio sp. K90mix chromosome, complete genometype I secretion outer membrane protein, TolC family2e-0963.9
NC_011753:1501868:1518258151825815195711314Vibrio splendidus LGP32 chromosome 1, complete genomeouter membrane protein5e-0962.8
NC_015850:1060000:1079709107970910809921284Acidithiobacillus caldus SM-1 chromosome, complete genometype I secretion outer membrane protein, TolC1e-0758.5
NC_013173:8923:2525425254265851332Desulfomicrobium baculatum DSM 4028, complete genometype I secretion outer membrane protein, TolC family2e-0757.8
NC_012850:3454270:3477855347785534792881434Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeRND efflux system, outer membrane lipoprotein, NodT family6e-0755.8
NC_014926:819163:8191638191638204521290Thermovibrio ammonificans HB-1 chromosome, complete genomeouter membrane efflux protein4e-0653.5
NC_007958:2370619:2400563240056324018341272Rhodopseudomonas palustris BisB5, complete genomeouter membrane efflux protein4e-0653.1