Pre_GI: BLASTP Hits

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Query: NC_010067:191190:208147 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 208147, End: 208398, Length: 252

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011741:4570498:458912245891224589562441Escherichia coli IAI1 chromosome, complete genomehypothetical protein5e-22103
CU928160:4570498:458912245891224589562441Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein5e-22103
NC_009792:3665369:368216536821653682593429Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-2097.1
NC_012917:1840172:186270218627021863139438Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein2e-1890.9
NC_009792:3245368:327774532777453278182438Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-1787.8
NC_011283:4438500:445597944559794456392414Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-1477.8
NC_012125:4716000:473015347301534730485333Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-1475.9
NC_013941:3300000:332635433263543326755402Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-1374.3
NC_004547:1174650:119471011947101195108399Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-1271.6
NC_012880:3421500:343043134304313430814384Dickeya dadantii Ech703, complete genomehypothetical protein2e-1270.9
NC_008800:1090000:110731611073161107732417Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative ATP/GTP-binding protein3e-1270.5
NC_009436:3117661:313781431378143138128315Enterobacter sp. 638, complete genomehypothetical protein2e-1167.4
NC_009801:2898426:292365429236542924058405Escherichia coli E24377A, complete genomehypothetical protein6e-1166.2
NC_011094:2791719:280775428077542807978225Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein7e-1165.9
NC_013971:73037:869858698587341357Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein3e-0960.8