Pre_GI: BLASTP Hits

Some Help

Query: NC_010067:191190:202904 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 202904, End: 204778, Length: 1875

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009436:3117661:3141163314116331430371875Enterobacter sp. 638, complete genomeDNA-binding protein01196
NC_011741:4570498:4583846458384645857201875Escherichia coli IAI1 chromosome, complete genomeputative integrase01118
CU928160:4570498:4583846458384645857201875Escherichia coli IAI1 chromosome, complete genomeputative integrase01118
NC_008800:1090000:1101870110187011037291860Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,DNA-binding protein0673
NC_012917:1840172:1853169185316918548541686Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeDNA-binding protein2e-159562
NC_016816:1545354:1555375155537515574082034Pantoea ananatis LMG 5342, complete genomeDNA-binding protein5e-109395
NC_004547:1174650:1189894118989411918581965Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative integrase6e-94345
NC_009524:1369395:1377817137781713797841968Psychrobacter sp. PRwf-1 chromosome, complete genomehypothetical protein7e-89328
NC_011283:4438500:4459610445961044612411632Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-88327
NC_015726:406450:4168814168814189592079Cupriavidus necator N-1 chromosome 1, complete sequenceintegrase7e-82305
NC_020829:636773:6446296446296466111983Pseudomonas denitrificans ATCC 13867, complete genomeintegrase family protein1e-77291
NC_010322:583842:5922595922595943282070Pseudomonas putida GB-1 chromosome, complete genomeintegrase family protein7e-77288
NC_015458:2998000:3005609300560930076182010Pusillimonas sp. T7-7 chromosome, complete genomeintegrase family protein3e-73276
NC_002655:3538656:3561775356177535631871413Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-64247
NC_013008:3525428:3553230355323035548611632Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-64247
NC_011353:3573641:3598505359850536001361632Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDNA-binding protein2e-64247
NC_002695:3468873:3494269349426934959001632Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-64247
NC_013941:3300000:3332001333200133336321632Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDNA-binding protein2e-64247
NC_013421:1819036:1852002185200218536211620Pectobacterium wasabiae WPP163, complete genomehypothetical protein3e-63243
NC_003919:3396136:3406559340655934084091851Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-62241
NC_014640:6815264:6837004683700468390132010Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein6e-55215
NC_009792:3665369:3685946368594636876131668Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-53210
NC_014562:2563466:2591394259139425932321839Pantoea vagans C9-1 chromosome, complete genomeTransposase B from transposon Tn5545e-53209
NC_016514:3573400:3595476359547635968071332Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein6e-49196
NC_012880:3421500:3435298343529834369561659Dickeya dadantii Ech703, complete genomehypothetical protein3e-47190
NC_015563:2018038:2028877202887720309462070Delftia sp. Cs1-4 chromosome, complete genomeintegrase family protein7e-47189
NC_014394:2577949:2593443259344325953741932Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein4e-45183
NC_011663:674069:6792846792846813652082Shewanella baltica OS223 chromosome, complete genomehypothetical protein4e-41170
NC_009665:639914:6451236451236472042082Shewanella baltica OS185 chromosome, complete genomehypothetical protein4e-41170
NC_020829:940692:9877309877309899672238Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein2e-40167
NC_004578:5192110:5198455519845552006922238Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-38160
NC_005773:4899252:4904499490449949067332235Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein4e-37156
NC_014311:3076519:3113502311350231155562055Ralstonia solanacearum PSI07 chromosome, complete genomephage integrase2e-34147
NC_005773:4282840:4292503429250342943741872Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein6e-32139
NC_020209:1949500:1958027195802719601412115Pseudomonas poae RE*1-1-14, complete genomehypothetical protein1e-26122
NC_010571:2943369:2953324295332429553392016Opitutus terrae PB90-1, complete genomehypothetical protein1e-25118
NC_008740:2563278:2577558257755825797052148Marinobacter aquaeolei VT8, complete genomehypothetical protein2e-1688.2
NC_014752:834616:846608846608847522915Neisseria lactamica ST-640, complete genomehypothetical protein1e-1585.5
NC_010506:4873487:4883679488367948859342256Shewanella woodyi ATCC 51908, complete genomehypothetical protein7e-1169.7