Pre_GI: BLASTP Hits

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Query: NC_010067:191190:201597 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 201597, End: 202907, Length: 1311

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009436:3117661:3143034314303431442361203Enterobacter sp. 638, complete genomephage integrase family protein0716
NC_011741:4570498:4582485458248545838491365Escherichia coli IAI1 chromosome, complete genomeputative integrase0639
CU928160:4570498:4582485458248545838491365Escherichia coli IAI1 chromosome, complete genomePutative integrase0639
NC_008800:1090000:1100515110051511018731359Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative integrase/recombinase8e-73274
NC_012917:1840172:1851872185187218531761305Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein1e-69264
NC_014562:2563466:2593225259322525947601536Pantoea vagans C9-1 chromosome, complete genomehypothetical protein8e-53208
NC_010322:583842:5907045907045922691566Pseudomonas putida GB-1 chromosome, complete genomeintegrase family protein3e-43176
NC_016816:1545354:1557401155740115589451545Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family3e-41169
NC_004547:1174650:1188401118840111898941494Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative integrase1e-40167
NC_013421:1819036:1850692185069218520021311Pectobacterium wasabiae WPP163, complete genomeintegrase family protein2e-39164
NC_015726:406450:4153564153564168881533Cupriavidus necator N-1 chromosome 1, complete sequenceintegrase/recombinase1e-38161
NC_002655:3538656:3563184356318435645091326Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-37158
NC_013941:3300000:3333629333362933349541326Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeSite-specific recombinase, phage integrase family protein1e-37157
NC_013008:3525428:3554858355485835561711314Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-37157
NC_011353:3573641:3600133360013336014461314Escherichia coli O157:H7 str. EC4115 chromosome, complete genomesite-specific recombinase, phage integrase family protein1e-37157
NC_002695:3468873:3495897349589734972101314Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-37157
NC_003919:3396136:3408402340840234099821581Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein3e-36153
NC_009524:1369395:1379784137978413813851602Psychrobacter sp. PRwf-1 chromosome, complete genomephage integrase family protein2e-34147
NC_011283:4438500:4461238446123844625091272Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase5e-34145
NC_020829:636773:6431226431226446361515Pseudomonas denitrificans ATCC 13867, complete genomeintegrase/recombinase3e-32139
NC_016514:3573400:3596820359682035981451326Enterobacter cloacae EcWSU1 chromosome, complete genomeintegrase family protein1e-31137
NC_009792:3665369:3687591368759136887781188Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-29129
NC_015458:2998000:3007611300761130091521542Pusillimonas sp. T7-7 chromosome, complete genomeintegrase family protein8e-29128
NC_011663:674069:6777386777386792911554Shewanella baltica OS223 chromosome, complete genomeintegrase family protein4e-27122
NC_009665:639914:6435776435776451301554Shewanella baltica OS185 chromosome, complete genomephage integrase family protein4e-27122
NC_014311:3076519:3115549311554931171411593Ralstonia solanacearum PSI07 chromosome, complete genomephage integrase1e-24114
NC_006350:595893:6359436359436374361494Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein9e-1995.1
NC_012880:3421500:3436962343696234383171356Dickeya dadantii Ech703, complete genomeintegrase family protein9e-1891.7
NC_012918:4648220:4648220464822046492331014Geobacter sp. M21 chromosome, complete genomeintegrase family protein4e-1582.8
NC_014366:478000:4853014853014868841584Gamma proteobacterium HdN1, complete genomePhage integrase, probable truncated4e-1582.8
NC_014394:2577949:259552625955262596365840Gallionella capsiferriformans ES-2 chromosome, complete genome3e-1377
NC_014752:834616:844413844413844949537Neisseria lactamica ST-640, complete genomehypothetical protein6e-1272.4
NC_008740:2563278:2579698257969825812061509Marinobacter aquaeolei VT8, complete genomephage integrase family protein3e-1170.1
NC_014752:834616:845110845110845796687Neisseria lactamica ST-640, complete genomeintegrase6e-1168.9
NC_014640:6815264:6839010683901068405541545Achromobacter xylosoxidans A8 chromosome, complete genomeintegrase3e-0963.5