Pre_GI: BLASTP Hits

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Query: NC_010067:191190:200549 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 200549, End: 201604, Length: 1056

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009436:3117661:3144337314433731455391203Enterobacter sp. 638, complete genomephage integrase family protein1e-179629
NC_011741:4570498:4581350458135045825521203Escherichia coli IAI1 chromosome, complete genomeputative integrase5e-163573
CU928160:4570498:4581350458135045825521203Escherichia coli IAI1 chromosome, complete genomeputative integrase5e-163573
NC_012917:1840172:1850685185068518518751191Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein2e-87322
NC_008800:1090000:1099313109931311005181206Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative integrase/recombinase2e-87322
NC_016816:1545354:1558942155894215601501209Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family4e-70265
NC_014562:2563466:259475725947572595506750Pantoea vagans C9-1 chromosome, complete genomeTyrosine recombinase xerD3e-54212
NC_013421:1819036:1849485184948518506901206Pectobacterium wasabiae WPP163, complete genomeintegrase family protein4e-54212
NC_013008:3525428:3556173355617335573781206Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-52207
NC_002695:3468873:3497212349721234984171206Escherichia coli O157:H7 str. Sakai, complete genomeputative site specific recombinase1e-52207
NC_011353:3573641:3601448360144836026531206Escherichia coli O157:H7 str. EC4115 chromosome, complete genome1e-52207
NC_013941:3300000:3334944333494433361491206Escherichia coli O55:H7 str. CB9615 chromosome, complete genomesite specific recombinase1e-52207
NC_004547:1174650:1187197118719711884081212Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative integrase9e-53207
NC_011283:4438500:4462553446255344637581206Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase2e-50199
NC_002655:3538656:3564664356466435657071044Escherichia coli O157:H7 EDL933, complete genomehypothetical protein6e-47188
NC_009524:1369395:1381372138137213825621191Psychrobacter sp. PRwf-1 chromosome, complete genomephage integrase family protein3e-46185
NC_015458:2998000:3009145300914530104251281Pusillimonas sp. T7-7 chromosome, complete genomeintegrase family protein5e-44178
NC_012880:3421500:3438268343826834394911224Dickeya dadantii Ech703, complete genomeintegrase family protein3e-42172
NC_016514:3573400:3598096359809635993641269Enterobacter cloacae EcWSU1 chromosome, complete genometyrosine recombinase XerD1e-40167
NC_010322:583842:5894255894255907111287Pseudomonas putida GB-1 chromosome, complete genomeintegrase family protein2e-40166
NC_009792:3665369:3688867368886736899851119Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-38160
NC_015726:406450:4141604141604153561197Cupriavidus necator N-1 chromosome 1, complete sequencetyrosine-based site-specific recombinase CMGI-74e-36152
NC_020829:636773:6418616418616431711311Pseudomonas denitrificans ATCC 13867, complete genomeintegrase3e-35149
NC_015563:2018038:2032460203246020336111152Delftia sp. Cs1-4 chromosome, complete genomeintegrase family protein3e-33142
NC_003919:3396136:3409969340996934112881320Xanthomonas axonopodis pv. citri str. 306, complete genomeintegrase/recombinase1e-31137
NC_014752:834616:874228874228875190963Neisseria lactamica ST-640, complete genomehypothetical protein7e-26118
NC_014640:6815264:6840529684052968417851257Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein9e-23107
NC_008577:2604281:2607529260752926088511323Shewanella sp. ANA-3 chromosome 1, complete sequencephage integrase family protein6e-2098.6
NC_010506:4873487:4880722488072248820231302Shewanella woodyi ATCC 51908, complete genomephage integrase family protein5e-1789
NC_004578:5192110:5195601519560151968661266Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family9e-1684.7
NC_020829:940692:9915479915479928121266Pseudomonas denitrificans ATCC 13867, complete genomephage integrase family site specific recombinase9e-1581.6
NC_010571:2943369:2950545295054529517831239Opitutus terrae PB90-1, complete genomeintegrase family protein1e-1480.9
NC_005773:4282840:429044642904464291432987Pseudomonas syringae pv. phaseolicola 1448A, complete genomePhage integrase family domain protein1e-1480.5
NC_014311:3076519:3117128311712831183451218Ralstonia solanacearum PSI07 chromosome, complete genomephage integrase3e-1376.3
NC_014366:478000:4841234841234853041182Gamma proteobacterium HdN1, complete genomephage integrase4e-1375.9
NC_020209:1949500:1955255195525519565081254Pseudomonas poae RE*1-1-14, complete genomesite-specific recombinase, phage integrase family protein4e-1375.9
NC_005773:4899252:4901655490165549029171263Pseudomonas syringae pv. phaseolicola 1448A, complete genomesite-specific recombinase, phage integrase family8e-1374.7
NC_006350:595893:6374336374336386111179Burkholderia pseudomallei K96243 chromosome 1, complete sequencephage integrase family protein3e-1272.8
NC_009665:639914:6422716422716435931323Shewanella baltica OS185 chromosome, complete genomephage integrase family protein8e-0961.6
NC_011663:674069:6764326764326777541323Shewanella baltica OS223 chromosome, complete genomeintegrase family protein8e-0961.6
NC_008740:2563278:2581229258122925825151287Marinobacter aquaeolei VT8, complete genomephage integrase family protein3e-0859.7
NC_017986:2548720:2556613255661325578421230Pseudomonas putida ND6 chromosome, complete genomephage integrase family protein5e-0859.3
NC_004603:3080614:3098708309870830999791272Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein2e-0653.9
NC_011773:4296082:4296082429608242971671086Bacillus cereus AH820 chromosome, complete genometransposase A5e-0652.4