Some Help

Query: NC_010067:1414000:1423445 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 1423445, End: 1426831, Length: 3387

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015761:1630000:1635545163554516389673423Salmonella bongori NCTC 12419, complete genomehypothetical protein01466
NC_011149:1429523:1456499145649914599213423Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein01436
NC_013716:5020204:5032100503210050354803381Citrobacter rodentium ICC168, complete genomeputative T3SS effector protein EspN2-201025
NC_013364:1477248:1487124148712414905253402Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector EspN0750
NC_011353:1513000:1523030152303015264313402Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein0747
NC_002695:1571389:1582102158210215855033402Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein0747
NC_013361:3597812:3607819360781936112203402Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector EspN0746
NC_013353:1305712:1315651131565113189773327Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector EspN0739
AP010958:1305712:1315651131565113189773327Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector EspN-homolog0739
NC_013008:1513000:1523906152390615267192814Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenon-LEE-encoded type III effector0691
NC_002655:1655944:1666666166666616694792814Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by prophage CP-933N0686
NC_007946:4779745:4817383481738348204273045Escherichia coli UTI89, complete genomecytotoxic necrotizing factor 12e-1585.5
NC_002655:1655944:166607716660771666661585Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by prophage CP-933N2e-0965.9