Pre_GI: BLASTP Hits

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Query: NC_010067:1414000:1414086 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 1414086, End: 1414478, Length: 393

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010498:1615980:161838816183881618780393Escherichia coli SMS-3-5, complete genomehypothetical protein8e-59225
NC_016902:2361628:236242223624222362814393Escherichia coli KO11FL chromosome, complete genomehypothetical protein2e-58223
NC_011741:1625535:164108316410831641475393Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-58223
CU928160:1625535:164108316410831641475393Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein2e-58223
CP002185:1727493:174304117430411743433393Escherichia coli W, complete genomeconserved protein2e-58223
CP002516:2361628:236242223624222362814393Escherichia coli KO11, complete genomeprotein of unknown function DUF388, OB-fold protein2e-58223
NC_012947:2189533:220859022085902208982393Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein3e-58223
NC_009800:1632585:164717216471721647564393Escherichia coli HS, complete genomeconserved hypothetical protein TIGR001563e-58223
NC_011415:1715644:173119217311921731584393Escherichia coli SE11 chromosome, complete genomehypothetical protein5e-58222
NC_016845:2781438:280429328042932804751459Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-39161
NC_012731:2739964:276387327638732764277405Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein5e-39159
NC_008800:1300500:132331813233181323731414Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-1168.6
NC_010634:3155741:316264731626473163060414Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein8e-1062.4
NC_006155:3237990:324489632448963245309414Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein6e-0959.7
NC_009708:1497898:150985615098561510269414Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeOB-fold nucleic acid binding domain-containing protein7e-0959.3
NC_012214:1:212922129221690399Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein1e-0858.9
NC_012559:2353236:237050423705042370899396Laribacter hongkongensis HLHK9, complete genomePossible exported protein6e-0856.2