Pre_GI: BLASTP Hits

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Query: NC_010002:3980832:3984761 Delftia acidovorans SPH-1, complete genome

Start: 3984761, End: 3985771, Length: 1011

Host Lineage: Delftia acidovorans; Delftia; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This species was isolated from soil enriched with acetamide in Delft in the Netherlands. It was originally classified as Comamonas acidivorans in 1926, and redescribed and characterized in 1999. This organism is found in soil, sediment, activated sludge, crude oil, water, and various clinical samples.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015563:3571682:359247535924753593452978Delftia sp. Cs1-4 chromosome, complete genomeTIM-barrel protein, yjbN family2e-180632
NC_013446:2655955:2671163267116326721971035Comamonas testosteroni CNB-2, complete genomeTIM-barrel protein, yjbN family2e-153542
NC_008752:2724977:2727883272788327289261044Acidovorax avenae subsp. citrulli AAC00-1, complete genomeTIM-barrel protein, yjbN family2e-139495
NC_008060:1182378:1186253118625311873501098Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceTIM-barrel protein, yjbN family9e-104377
NC_008542:1727000:1730938173093817320351098Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceTIM-barrel protein, yjbN family9e-104377
NC_007973:2150962:2162059216205921631141056Ralstonia metallidurans CH34 chromosome 1, complete sequenceTIM-barrel protein, yjbN family2e-103375
NC_010508:1705500:170956517095651710551987Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceTIM-barrel protein, yjbN family3e-100365
NC_014153:2282725:2289467228946722905161050Thiomonas intermedia K12 chromosome, complete genomeTIM-barrel protein, yjbN family2e-98358
NC_017030:6912830:6935451693545169364641014Corallococcus coralloides DSM 2259 chromosome, complete genometRNA-dihydrouridine synthase A9e-91333
NC_020181:3585898:3624834362483436258981065Enterobacter aerogenes EA1509E, complete genometRNA dihydrouridine synthase A7e-90330
NC_013971:335247:3524143524143534631050Erwinia amylovora ATCC 49946 chromosome, complete genometRNA-dihydrouridine synthase A2e-89328
NC_013961:3413011:3417919341791934189681050Erwinia amylovora, complete genometRNA-dihydrouridine synthase A2e-89328
NC_019940:2432689:2446066244606624471031038Thioflavicoccus mobilis 8321 chromosome, complete genometRNA dihydrouridine synthase A3e-89328
NC_013364:4990365:5001454500145450024911038Escherichia coli O111:H- str. 11128, complete genometRNA-dihydrouridine synthase A5e-89327
NC_011138:3881446:3882924388292438839701047Alteromonas macleodii 'Deep ecotype', complete genometRNA-dihydrouridine synthase A1e-88327
NC_010501:1868888:187382018738201874785966Pseudomonas putida W619, complete genomeTIM-barrel protein, yjbN family1e-88326
NC_008027:3953951:3968573396857339695741002Pseudomonas entomophila L48, complete genometRNA-dihydrouridine synthase A1e-87323
NC_007005:2191500:2209059220905922100781020Pseudomonas syringae pv. syringae B728a, complete genomeDihydrouridine synthase TIM-barrel protein yjbN2e-87322
NC_007492:4310828:432433343243334325328996Pseudomonas fluorescens PfO-1, complete genomeDihydrouridine synthase TIM-barrel protein yjbN5e-87321
NC_004129:2201780:2205949220594922069591011Pseudomonas fluorescens Pf-5, complete genomeTIM-barrel protein, yjbN family7e-87320
NC_010067:3310336:3363923336392333649601038Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-86318
NC_015224:4101939:4108169410816941092151047Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,tRNA-dihydrouridine synthase A4e-86318
NC_007645:2408125:2414330241433024153791050Hahella chejuensis KCTC 2396, complete genometRNA-dihydrouridine synthase7e-86317
NC_012660:1737423:1737423173742317384331011Pseudomonas fluorescens SBW25 chromosome, complete genometRNA-dihydrouridine synthase A8e-86317
NC_015733:1943385:194671419467141947652939Pseudomonas putida S16 chromosome, complete genometRNA-dihydrouridine synthase A5e-85314
NC_009719:1135523:1154675115467511556821008Parvibaculum lavamentivorans DS-1 chromosome, complete genometRNA-dihydrouridine synthase A3e-84312
NC_016830:4639388:465387746538774654815939Pseudomonas fluorescens F113 chromosome, complete genometRNA dihydrouridine synthase A4e-84311
NC_020209:945000:951395951395952330936Pseudomonas poae RE*1-1-14, complete genometRNA-dihydrouridine synthase A1e-80299
NC_008358:263458:283755283755284741987Hyphomonas neptunium ATCC 15444, complete genometRNA-dihydrouridine synthase A3e-80298
NC_008686:1383891:138784113878411388830990Paracoccus denitrificans PD1222 chromosome 1, complete sequencedihydrouridine synthase, DuS4e-76285
NC_018679:3843870:384788138478813848810930Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completetRNA-dihydrouridine synthase A9e-75280
NC_015675:4565500:458253245825324583530999Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTIM-barrel protein, yjbN family5e-73275
NC_007963:1370903:1376142137614213771821041Chromohalobacter salexigens DSM 3043, complete genomeTIM-barrel protein, yjbN family3e-73275
NC_010161:1179000:119759811975981198581984Bartonella tribocorum CIP 105476, complete genometRNA-dihydrouridine synthase A3e-73275
NC_009952:2661268:2676018267601826770341017Dinoroseobacter shibae DFL 12, complete genometRNA-dihydrouridine synthase A6e-72271
NC_007880:1456705:147982714798271480810984Francisella tularensis subsp. holarctica, complete genomeRNA dihydrouridine synthase A2e-71269
NC_004556:1933944:195002019500201951018999Xylella fastidiosa Temecula1, complete genomehypothetical protein9e-70263
NC_010505:2103887:210388721038872104846960Methylobacterium radiotolerans JCM 2831, complete genomedihydrouridine synthase DuS1e-68260
NC_017278:1873934:1894791189479118958161026Thermus sp. CCB_US3_UF1 chromosome, complete genometRNA-dihydrouridine synthase1e-65250
NC_017325:1488841:1501419150141915025761158Sinorhizobium meliloti SM11 chromosome, complete genometRNA-dihydrouridine synthase A3e-63242
NC_007503:2098980:212359621235962124561966Carboxydothermus hydrogenoformans Z-2901, complete genomeputative TIM-barrel protein, NifR3 family7e-2098.2
NC_018867:361423:363127363127364104978Dehalobacter sp. CF chromosome, complete genometRNA dihydrouridine synthase B2e-1893.6
NC_013316:4018451:403314440331444034112969Clostridium difficile R20291, complete genometRNA-dihydrouridine synthase3e-1789.4
NC_009089:4140764:415482241548224155790969Clostridium difficile 630, complete genometRNA-dihydrouridine synthase3e-1789.4
NC_017030:8667935:8695301869530186963141014Corallococcus coralloides DSM 2259 chromosome, complete genomeputative tRNA-dihydrouridine synthase1e-1687.8
NC_020134:134875:140266140266141240975Clostridium stercorarium subsp. stercorarium DSM 8532, completetRNA-dihydrouridine synthase 14e-1685.9
NC_019903:83857:927869278693751966Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,tRNA-U20-dihydrouridine synthase2e-1583.2
NC_020291:117983:139857139857140822966Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometRNA-dihydrouridine synthase B3e-1583.2
NC_016584:85543:902889028891253966Desulfosporosinus orientis DSM 765 chromosome, complete genomeTIM-barrel protein, nifR3 family4e-1582.4
NC_004557:162670:167984167984168952969Clostridium tetani E88, complete genomenitrogen regulation protein nifR34e-1582.4
NC_007759:723675:731735731735732715981Syntrophus aciditrophicus SB, complete genometRNA-dihydrouridine synthase1e-1480.9
NC_018664:2459994:247820724782072479175969Clostridium acidurici 9a chromosome, complete genometRNA-dihydrouridine synthase B2e-1480.5
NC_016930:11721:125141251413509996Rickettsia philipii str. 364D chromosome, complete genometRNA-dihydrouridine synthase7e-1478.6
NC_016913:1134000:115505111550511156046996Rickettsia rickettsii str. Brazil chromosome, complete genometRNA-dihydrouridine synthase7e-1478.6
NC_015949:71474:912649126492250987Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeTIM-barrel protein, nifR3 family7e-1478.6
NC_002978:4973:292132921330175963Wolbachia endosymbiont of Drosophila melanogaster, complete genomeNifR3 family protein9e-1478.2
NC_012416:4973:293392933930301963Wolbachia sp. wRi, complete genomeNifR3 family protein8e-1478.2
NC_016639:13188:131881318814183996Rickettsia slovaca 13-B chromosome, complete genomePutative dihydrouridine synthase Dus7e-1478.2
NC_017065:13188:131881318814183996Rickettsia slovaca str. D-CWPP chromosome, complete genomePutative dihydrouridine synthase Dus7e-1478.2
NC_014972:2089003:210580821058082106797990Desulfobulbus propionicus DSM 2032 chromosome, complete genometRNA-U20-dihydrouridine synthase1e-1377.4
NC_014166:681290:687958687958688908951Arcobacter nitrofigilis DSM 7299 chromosome, complete genomedihydrouridine synthase2e-1377
NC_021182:4602683:462410046241004625071972Clostridium pasteurianum BC1, complete genomeputative TIM-barrel protein, nifR3 family2e-1377
NC_017028:109811:129407129407130402996Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completePutative dihydrouridine synthase Dus2e-1376.6
NC_017505:1370128:1395902139590213970261125Neisseria meningitidis alpha710 chromosome, complete genomenifR3 protein2e-1376.6
NC_012563:4004709:403168040316804032651972Clostridium botulinum A2 str. Kyoto, complete genomedihydrouridine synthase3e-1376.3
NC_017518:1449923:1474130147413014751401011Neisseria meningitidis NZ-05/33 chromosome, complete genomedihydrouridine synthase3e-1376.3
NC_009495:3735703:376375637637563764727972Clostridium botulinum A str. ATCC 3502 chromosome, complete genomedihydrouridine synthase3e-1376.3
NC_009697:3711692:373974537397453740716972Clostridium botulinum A str. ATCC 19397 chromosome, completedihydrouridine synthase3e-1376.3
NC_009698:3609881:363685536368553637826972Clostridium botulinum A str. Hall chromosome, complete genomedihydrouridine synthase3e-1376.3
NC_014393:4541000:456059345605934561558966Clostridium cellulovorans 743B chromosome, complete genomeTIM-barrel protein, nifR3 family4e-1375.9
NC_017297:3838189:386516538651653866136972Clostridium botulinum F str. 230613 chromosome, complete genomedihydrouridine synthase4e-1375.9
NC_009699:3839575:386654338665433867514972Clostridium botulinum F str. Langeland chromosome, complete genomedihydrouridine synthase4e-1375.9
NC_010516:3807780:383476238347623835733972Clostridium botulinum B1 str. Okra, complete genomedihydrouridine synthase4e-1375.9
NC_010718:128423:129394129394130377984Natranaerobius thermophilus JW/NM-WN-LF, complete genomeTIM-barrel protein, nifR3 family4e-1375.9
NC_007614:109000:1365651365651375781014Nitrosospira multiformis ATCC 25196 chromosome 1, completeDihydrouridine synthase TIM-barrel protein nifR35e-1375.5
NC_009454:259022:259789259789260763975Pelotomaculum thermopropionicum SI, complete genometRNA-dihydrouridine synthase7e-1375.1
NC_002932:1798869:1823480182348018245381059Chlorobium tepidum TLS, complete genomeTIM-barrel protein, NifR3 family7e-1375.1
NC_003116:1518110:1538729153872915397391011Neisseria meningitidis Z2491, complete genomehypothetical protein8e-1374.7
NC_013016:1289975:1311613131161313127371125Neisseria meningitidis alpha14 chromosome, complete genomeputative tRNA-dihydrouridine synthase9e-1374.7
NC_015687:3326461:334573333457333346698966Clostridium acetobutylicum DSM 1731 chromosome, complete genomeNifR3 family protein1e-1274.3
NC_003030:3324834:334410733441073345072966Clostridium acetobutylicum ATCC 824, complete genomeNifR3 family enzyme1e-1274.3
NC_014935:836868:850476850476851438963Nitratifractor saLSUginis DSM 16511 chromosome, complete genometim-barrel protein, nifr3 family1e-1273.9
NC_007513:632884:6554266554266564961071Synechococcus sp. CC9902, complete genomeDihydrouridine synthase TIM-barrel protein nifR33e-1273.2
NC_015957:8816355:8832903883290388341231221Streptomyces violaceusniger Tu 4113 chromosome, complete genomeTIM-barrel protein, nifR3 family3e-1273.2
NC_013851:949973:9557229557229567381017Allochromatium vinosum DSM 180 chromosome, complete genomeTIM-barrel protein, nifR3 family3e-1272.8
NC_014972:3227500:3229358322935832304011044Desulfobulbus propionicus DSM 2032 chromosome, complete genomedihydrouridine synthase DuS4e-1272.8
NC_017513:1331623:1359802135980213608121011Neisseria meningitidis G2136 chromosome, complete genomedihydrouridine synthase5e-1272.4
NC_008767:1321129:1344689134468913456991011Neisseria meningitidis FAM18, complete genomehypothetical protein5e-1272.4
NC_014328:4471995:449344644934464494408963Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative tRNA-dihydrouridine synthase1e-1171.2
NC_007798:301456:306962306962307957996Neorickettsia sennetsu str. Miyayama, complete genomeputative tRNA-dihydrouridine synthase1e-1171.2
NC_008593:153014:162795162795163760966Clostridium novyi NT, complete genomenifR3 family enzyme1e-1171.2
NC_009922:490500:502960502960503934975Alkaliphilus oremlandii OhILAs, complete genomeputative TIM-barrel protein, nifR3 family1e-1170.9
NC_010475:953618:9711229711229721831062Synechococcus sp. PCC 7002, complete genomeDihydrouridine synthase (Dus)2e-1170.5
NC_015425:163000:172843172843173805963Clostridium botulinum BKT015925 chromosome, complete genomeputative TIM-barrel protein, nifR3 family2e-1170.1
NC_007907:225948:233200233200234180981Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-1169.7
NC_015977:3324000:334226733422673343202936Roseburia hominis A2-183 chromosome, complete genometRNA-dihydrouridine synthase6e-1168.6
NC_009848:720510:736808736808737782975Bacillus pumilus SAFR-032, complete genometRNA-dihydrouridine synthase8e-1168.2
NC_015554:4724245:474773247477324748730999Alteromonas sp. SN2 chromosome, complete genometRNA-dihydrouridine synthase B9e-1168.2
NC_010723:173280:187823187823188788966Clostridium botulinum E3 str. Alaska E43, complete genometRNA-dihydrouridine synthase B1e-1067.8
NC_011653:748844:771421771421772311891Thermosipho africanus TCF52B, complete genomeNifR3 family protein1e-1067.4
NC_014541:475350:498726498726499691966Ferrimonas balearica DSM 9799 chromosome, complete genometRNA-U20-dihydrouridine synthase2e-1066.6
NC_003454:1346500:134656813465681347491924Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeNitrogen regulation protein NIFR34e-1065.9
NC_005070:617448:6409276409276419281002Synechococcus sp. WH 8102, complete genomeputative nitrogen regulation protein NifR3 family homolog6e-1065.5
NC_014410:2329838:2336619233661923376201002Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,TIM-barrel protein, nifR3 family6e-1065.1
NC_015634:2445396:244539624453962446391996Bacillus coagulans 2-6 chromosome, complete genomedihydrouridine synthase DuS8e-1064.7
NC_007516:1847745:1846747184674718477481002Synechococcus sp. CC9605, complete genomeDihydrouridine synthase TIM-barrel protein nifR39e-1064.7
UCMB5137:409500:425306425306426292987Bacillus atrophaeus UCMB-5137histidine phosphokinase/phophatase, putative9e-1064.7
NC_008262:2649289:268753626875362688516981Clostridium perfringens SM101, complete genomeputative dihydrouridine synthase1e-0964.3
NC_015565:173774:176905176905177876972Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeTIM-barrel protein, nifR3 family3e-0962.8
NC_003901:1568000:160671416067141607685972Methanosarcina mazei Go1, complete genomeNifR3-like protein4e-0962.4
NC_016641:2618587:262475826247582625747990Paenibacillus terrae HPL-003 chromosome, complete genomeputative tRNA-dihydrouridine synthase6e-0962
NC_013222:817686:820124820124821116993Robiginitalea biformata HTCC2501, complete genomeputative TIM-barrel enzyme, possible dehydrogenase, contains a highly conserved dihydrouridine synthase domain1e-0861.2
NC_011999:2023248:2032174203217420331781005Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein1e-0860.8
NC_020156:1565500:158504115850411586033993Nonlabens dokdonensis DSW-6, complete genomeTRNA-dihydrouridine synthase2e-0860.5
NC_013928:174500:179337179337180314978Streptococcus mutans NN2025, complete genomehypothetical protein2e-0860.1
NC_011567:75306:8088480884819391056Anoxybacillus flavithermus WK1, complete genometRNA-dihydrouridine synthase2e-0860.1
NC_017208:64500:791827918280180999Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeNif3 family protein5e-0858.9
NC_014219:83888:856938569386691999Bacillus selenitireducens MLS10 chromosome, complete genomeTIM-barrel protein, nifR3 family7e-0858.5
NC_017095:166896:175498175498176424927Fervidobacterium pennivorans DSM 9078 chromosome, complete genometRNA-dihydrouridine synthase2e-0757
NC_012673:1600242:161494816149481615943996Exiguobacterium sp. AT1b, complete genomeTIM-barrel protein, nifR3 family2e-0757
NC_008024:117241:1172411172411182901050Streptococcus pyogenes MGAS10750, complete genometRNA-dihydrouridine synthase3e-0756.2
NC_017512:1294970:131727513172751317979705Neisseria meningitidis WUE 2594, complete genome4e-0755.8
NC_010067:4149298:416627241662724167237966Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-0755.1
NC_008497:556365:5614865614865625081023Lactobacillus brevis ATCC 367, complete genometRNA-dihydrouridine synthase1e-0654.3
NC_012470:2021316:203960120396012040578978Streptococcus equi subsp. zooepidemicus, complete genometRNA-dihydrouridine synthase1e-0654.3
NC_014654:2138794:215474221547422155725984Halanaerobium sp. 'sapolanicus' chromosome, complete genomeTIM-barrel protein, nifR3 family2e-0653.5
NC_012121:139741:170502170502171497996Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative tRNA-dihydrouridine synthase 12e-0653.5
NC_011312:3060371:307745830774583078426969Aliivibrio salmonicida LFI1238 chromosome chromosome 1, completetRNA-dihydrouridine synthase B3e-0653.1
NC_011753:3088952:310623731062373107214978Vibrio splendidus LGP32 chromosome 1, complete genometRNA-dihydrouridine synthase B3e-0653.1