Pre_GI: BLASTN Hits

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Query: NC_010001:4730000 Clostridium phytofermentans ISDg, complete genome

Start: 4730000, End: 4755689, Length: 25690

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015391:2059191*2059191209896139771Carnobacterium sp. 17-4 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009922:2672396*2672396269704024645Alkaliphilus oremlandii OhILAs, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_018750:37415813741581376849826918Streptomyces venezuelae ATCC 10712, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012440:659646*65964669768738042Persephonella marina EX-H1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008599:1291300*1291300131526123962Campylobacter fetus subsp. fetus 82-40, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_006370:84720484720486812520922Photobacterium profundum SS9 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_000917:94008894008896019520108Archaeoglobus fulgidus DSM 4304, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_012440:585568*58556861010524538Persephonella marina EX-H1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015687:14786681478668150267124004Clostridium acetobutylicum DSM 1731 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014210:53708685370868538907818211Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-0869.9BLASTN svgBLASTP svg
NC_012778:13706413706415801220949Eubacterium eligens ATCC 27750, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014393:30556103055610307809922490Clostridium cellulovorans 743B chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014614:47857847857849868920112Clostridium sticklandii, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020291:39000463900046392536225317Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002944:42540114254011427748823478Mycobacterium avium subsp. paratuberculosis K-10, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010516:23740002374000239681422815Clostridium botulinum B1 str. Okra, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_012563:24660002466000248852922530Clostridium botulinum A2 str. Kyoto, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014659:4299552*4299552434331043759Rhodococcus equi 103S, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015519:2526047*2526047256306637020Tepidanaerobacter sp. Re1 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015957:19600019600021778021781Streptomyces violaceusniger Tu 4113 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_018664:28776928776930695419186Clostridium acidurici 9a chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_020134:19415231941523198006638544Clostridium stercorarium subsp. stercorarium DSM 8532, complete8e-0763.9BLASTN svgBLASTP svg
NC_011296:10862231086223110477418552Thermodesulfovibrio yellowstonii DSM 11347, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008710:577696*57769660295325258Borrelia turicatae 91E135, complete genome3e-0661.9BLASTN svgBLASTP svg