Query: NC_010001:4730000 Clostridium phytofermentans ISDg, complete genome
Start: 4730000, End: 4755689, Length: 25690
Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria
General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015391:2059191* | 2059191 | 2098961 | 39771 | Carnobacterium sp. 17-4 chromosome, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_009922:2672396* | 2672396 | 2697040 | 24645 | Alkaliphilus oremlandii OhILAs, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_018750:3741581 | 3741581 | 3768498 | 26918 | Streptomyces venezuelae ATCC 10712, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_012440:659646* | 659646 | 697687 | 38042 | Persephonella marina EX-H1, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_008599:1291300* | 1291300 | 1315261 | 23962 | Campylobacter fetus subsp. fetus 82-40, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_006370:847204 | 847204 | 868125 | 20922 | Photobacterium profundum SS9 chromosome 1, complete sequence | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_000917:940088 | 940088 | 960195 | 20108 | Archaeoglobus fulgidus DSM 4304, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_012440:585568* | 585568 | 610105 | 24538 | Persephonella marina EX-H1, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015687:1478668 | 1478668 | 1502671 | 24004 | Clostridium acetobutylicum DSM 1731 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014210:5370868 | 5370868 | 5389078 | 18211 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_012778:137064 | 137064 | 158012 | 20949 | Eubacterium eligens ATCC 27750, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014393:3055610 | 3055610 | 3078099 | 22490 | Clostridium cellulovorans 743B chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014614:478578 | 478578 | 498689 | 20112 | Clostridium sticklandii, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_020291:3900046 | 3900046 | 3925362 | 25317 | Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_002944:4254011 | 4254011 | 4277488 | 23478 | Mycobacterium avium subsp. paratuberculosis K-10, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_010516:2374000 | 2374000 | 2396814 | 22815 | Clostridium botulinum B1 str. Okra, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_012563:2466000 | 2466000 | 2488529 | 22530 | Clostridium botulinum A2 str. Kyoto, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014659:4299552* | 4299552 | 4343310 | 43759 | Rhodococcus equi 103S, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015519:2526047* | 2526047 | 2563066 | 37020 | Tepidanaerobacter sp. Re1 chromosome, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015957:196000 | 196000 | 217780 | 21781 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_018664:287769 | 287769 | 306954 | 19186 | Clostridium acidurici 9a chromosome, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_020134:1941523 | 1941523 | 1980066 | 38544 | Clostridium stercorarium subsp. stercorarium DSM 8532, complete | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_011296:1086223 | 1086223 | 1104774 | 18552 | Thermodesulfovibrio yellowstonii DSM 11347, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008710:577696* | 577696 | 602953 | 25258 | Borrelia turicatae 91E135, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |