Pre_GI: BLASTN Hits

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Query: NC_010001:4586000 Clostridium phytofermentans ISDg, complete genome

Start: 4586000, End: 4608664, Length: 22665

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015167:1154497*1154497118273428238Cellulophaga lytica DSM 7489 chromosome, complete genome2e-34155BLASTN svgBLASTP svg
NC_018664:20148720148722329221806Clostridium acidurici 9a chromosome, complete genome6e-29137BLASTN svgBLASTP svg
NC_010001:312500*31250033209919600Clostridium phytofermentans ISDg, complete genome2e-28135BLASTN svgBLASTP svg
NC_009922:2721343*2721343276393542593Alkaliphilus oremlandii OhILAs, complete genome1e-23119BLASTN svgBLASTP svg
NC_010830:11717811171781119624424464Candidatus Amoebophilus asiaticus 5a2, complete genome1e-20109BLASTN svgBLASTP svg
NC_004722:5194000*5194000525118457185Bacillus cereus ATCC 14579, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_003909:4996783*4996783505271855936Bacillus cereus ATCC 10987, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_004193:30787303078730309756518836Oceanobacillus iheyensis HTE831, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008262:2379144*2379144239845819315Clostridium perfringens SM101, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_008261:2708929*2708929273260323675Clostridium perfringens ATCC 13124, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_003366:24949072494907251858823682Clostridium perfringens str. 13, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_021171:4588792*4588792464231253521Bacillus sp. 1NLA3E, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_021182:4427468*4427468445021222745Clostridium pasteurianum BC1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_005957:5037499*5037499507811440616Bacillus thuringiensis serovar konkukian str. 97-27, complete5e-1487.7BLASTN svgBLASTP svg
NC_006274:50858605085860510874322884Bacillus cereus E33L, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010336:996661*996661105214055480Francisella philomiragia subsp. philomiragia ATCC 25017, complete7e-1383.8BLASTN svgBLASTP svg
NC_019970:2551607*2551607257838226776Thermoanaerobacterium thermosaccharolyticum M0795, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014934:1315106*1315106134075625651Cellulophaga algicola DSM 14237 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010001:14880001488000151119123192Clostridium phytofermentans ISDg, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_003454:983681*983681100260518925Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete1e-1179.8BLASTN svgBLASTP svg
NC_008600:5046000*5046000510070354704Bacillus thuringiensis str. Al Hakam, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011772:5158680*5158680520959950920Bacillus cereus G9842, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012472:50551845055184507809922916Bacillus cereus 03BB102, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014166:2319447*2319447234446925023Arcobacter nitrofigilis DSM 7299 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014335:49695494969549499246722919Bacillus cereus biovar anthracis str. CI chromosome, complete1e-1179.8BLASTN svgBLASTP svg
NC_009850:1601982*1601982162099819017Arcobacter butzleri RM4018, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_010001:47335447335449159918246Clostridium phytofermentans ISDg, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014829:43465004346500439031543816Bacillus cellulosilyticus DSM 2522 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_020291:684500*68450070271718218Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome7e-1073.8BLASTN svgBLASTP svg
NC_019970:81391781391783706923153Thermoanaerobacterium thermosaccharolyticum M0795, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014150:29241582924158294819224035Brachyspira murdochii DSM 12563 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007530:5033095*5033095507221139117Bacillus anthracis str. 'Ames Ancestor', complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003997:5032969*5032969507209939131Bacillus anthracis str. Ames, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006570:24636*246367715752522Francisella tularensis subsp. tularensis Schu 4, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008245:24652*246526389439243Francisella tularensis subsp. tularensis FSC 198, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008369:1702885*1702885175731754433Francisella tularensis subsp. holarctica OSU18, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008599:1489868*1489868151209922232Campylobacter fetus subsp. fetus 82-40, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009749:1699152*1699152175595256801Francisella tularensis subsp. holarctica FTA, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010677:96470*9647014828851819Francisella tularensis subsp. mediasiatica FSC147, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012778:2015409*2015409203979424386Eubacterium eligens ATCC 27750, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012225:21272721272723571322987Brachyspira hyodysenteriae WA1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014654:454633*45463349599841366Halanaerobium sp. 'sapolanicus' chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015977:3424178*34241783530311106134Roseburia hominis A2-183 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009883:14290001429000145248923490Rickettsia bellii OSU 85-389, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007940:979499794912566527717Rickettsia bellii RML369-C, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007513:513806*51380653756623761Synechococcus sp. CC9902, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008601:1733940*1733940179060556666Francisella tularensis subsp. novicida U112, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012108:3965433*3965433398469319261Desulfobacterium autotrophicum HRM2, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015275:1223088*1223088124719524108Clostridium lentocellum DSM 5427 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015696:517941*51794157358855648Francisella sp. TX077308 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013037:55878025587802561018522384Dyadobacter fermentans DSM 18053, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007880:1703346*1703346176005556710Francisella tularensis subsp. holarctica, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002488:1099975*1099975114540245428Xylella fastidiosa 9a5c, complete genome3e-0661.9BLASTN svgBLASTP svg