Pre_GI: BLASTN Hits

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Query: NC_010001:4250828 Clostridium phytofermentans ISDg, complete genome

Start: 4250828, End: 4272651, Length: 21824

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021182:4602683*4602683462770125019Clostridium pasteurianum BC1, complete genome2e-25125BLASTN svgBLASTP svg
NC_010382:4479464*4479464449809918636Lysinibacillus sphaericus C3-41, complete genome2e-22115BLASTN svgBLASTP svg
NC_003366:27882682788268280968621419Clostridium perfringens str. 13, complete genome8e-22113BLASTN svgBLASTP svg
NC_013316:1*14895548955Clostridium difficile R20291, complete genome1e-20109BLASTN svgBLASTP svg
NC_012778:688621*68862170872420104Eubacterium eligens ATCC 27750, complete genome8e-19103BLASTN svgBLASTP svg
NC_004557:2777291*2777291280449927209Clostridium tetani E88, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_020134:301500*30150033822836729Clostridium stercorarium subsp. stercorarium DSM 8532, complete7e-1693.7BLASTN svgBLASTP svg
NC_015913:1491393*1491393153098039588Candidatus Arthromitus sp. SFB-mouse-Japan, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008262:2649289*2649289270467655388Clostridium perfringens SM101, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_012781:2148478*2148478217363325156Eubacterium rectale ATCC 33656, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010520:3837378*3837378385959922222Clostridium botulinum A3 str. Loch Maree, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_019907:318077*31807733850220426Liberibacter crescens BT-1 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_012563:4004709*4004709403727332565Clostridium botulinum A2 str. Kyoto, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010516:3807780*3807780384035532576Clostridium botulinum B1 str. Okra, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010001:90250690250692609923594Clostridium phytofermentans ISDg, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015275:3243689*3243689326768223994Clostridium lentocellum DSM 5427 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_019970:336472*33647241533078859Thermoanaerobacterium thermosaccharolyticum M0795, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_004461:277291*27729132456847278Staphylococcus epidermidis ATCC 12228, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010723:10840001084000110630222303Clostridium botulinum E3 str. Alaska E43, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014328:4471995*4471995450215530161Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015557:583475*58347560736423890Hydrogenobaculum sp. 3684 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015587:583530*58353060741923890Hydrogenobaculum sp. SHO chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014614:6115*61154920643092Clostridium sticklandii, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_020291:12668851266885130737240488Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome3e-0971.9BLASTN svgBLASTP svg
NC_020411:583503*58350360739223890Hydrogenobaculum sp. HO, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014328:93839393839395781019418Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008593:196257*19625723516638910Clostridium novyi NT, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015687:3326461*3326461335126824808Clostridium acetobutylicum DSM 1731 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014774:995000*995000101800623007Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_013407:1478811*1478811149759918789Methanocaldococcus vulcanius M7, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003030:3324834*3324834334964224809Clostridium acetobutylicum ATCC 824, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008526:2489196*2489196251110721912Lactobacillus casei ATCC 334, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010674:11244311124431114553121101Clostridium botulinum B str. Eklund 17B, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_011567:75306*753069492919624Anoxybacillus flavithermus WK1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_019903:421000*42100043878617787Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,3e-0661.9BLASTN svgBLASTP svg
NC_015474:983468*983468100758524118Pyrococcus sp. NA2 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014378:131810*13181015448322674Acetohalobium arabaticum DSM 5501 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014122:205112*20511222866723556Methanocaldococcus infernus ME chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011184:597496*59749662492627431Vibrio fischeri MJ11 chromosome I, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_010520:31205003120500313949618997Clostridium botulinum A3 str. Loch Maree, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009379:43540443540445957024167Polynucleobacter sp. QLW-P1DMWA-1, complete genome3e-0661.9BLASTN svgBLASTP svg