Pre_GI: BLASTN Hits

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Query: NC_010001:3421710 Clostridium phytofermentans ISDg, complete genome

Start: 3421710, End: 3445703, Length: 23994

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014376:317312*31731234011222801Clostridium saccharolyticum WM1 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_015275:1223088*1223088124719524108Clostridium lentocellum DSM 5427 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012563:3556763*3556763357533918577Clostridium botulinum A2 str. Kyoto, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015977:44249344249347780535313Roseburia hominis A2-183 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010516:3368951*3368951339250323553Clostridium botulinum B1 str. Okra, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014614:2500301*2500301252659926299Clostridium sticklandii, complete genome7e-0763.9BLASTN svgBLASTP svg