Pre_GI: BLASTN Hits

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Query: NC_010001:3266561 Clostridium phytofermentans ISDg, complete genome

Start: 3266561, End: 3286205, Length: 19645

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012778:841934*84193489007548142Eubacterium eligens ATCC 27750, complete genome5e-100373BLASTN svgBLASTP svg
NC_007168:1705763*1705763172469118929Staphylococcus haemolyticus JCSC1435, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014328:1379437*1379437140209922663Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_004116:1827351*1827351185556528215Streptococcus agalactiae 2603V/R, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014377:1227850*1227850127023442385Thermosediminibacter oceani DSM 16646 chromosome, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_009881:92929*9292911990326975Rickettsia akari str. Hartford, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_009785:2049395*2049395207559926205Streptococcus gordonii str. Challis substr. CH1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009882:100000*10000012209922100Rickettsia rickettsii str. 'Sheila Smith', complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010263:100000*10000012209922100Rickettsia rickettsii str. Iowa, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012633:98000*9800012009922100Rickettsia africae ESF-5, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004461:921364*92136495875837395Staphylococcus epidermidis ATCC 12228, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015678:1443178*1443178146976126584Streptococcus parasanguinis ATCC 15912 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_012440:197728*19772822123323506Persephonella marina EX-H1, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_007296:1762000*1762000178429022291Streptococcus pyogenes MGAS6180, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_006448:59654*596548486525212Streptococcus thermophilus LMG 18311, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_000853:771746*77174679860126856Thermotoga maritima MSB8, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013895:1086500*1086500110848121982Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete1e-0765.9BLASTN svgBLASTP svg
NC_015760:61345*613458629324949Streptococcus salivarius CCHSS3, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013642:545464*54546457230426841Thermotoga naphthophila RKU-10, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_000963:83408*8340810609922692Rickettsia prowazekii str. Madrid E, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_003228:4449072*4449072446793218861Bacteroides fragilis NCTC 9343, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_003909:3606177*3606177364959943423Bacillus cereus ATCC 10987, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_003997:3617000*3617000367460757608Bacillus anthracis str. Ames, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_005945:3636321*3636321368007243752Bacillus anthracis str. Sterne, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_006274:3697255*3697255372593028676Bacillus cereus E33L, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_006347:4562242*4562242458193619695Bacteroides fragilis YCH46, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007530:3616828*3616828367637859551Bacillus anthracis str. 'Ames Ancestor', complete genome2e-0661.9BLASTN svgBLASTP svg
NC_011772:3787500*3787500381637528876Bacillus cereus G9842, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014335:3589726*3589726362559935874Bacillus cereus biovar anthracis str. CI chromosome, complete2e-0661.9BLASTN svgBLASTP svg
NC_012563:2721658*2721658274175820101Clostridium botulinum A2 str. Kyoto, complete genome9e-0660BLASTN svgBLASTP svg
NC_010003:2029416*2029416205389024475Petrotoga mobilis SJ95, complete genome9e-0660BLASTN svgBLASTP svg
NC_010001:47035004703500472653823039Clostridium phytofermentans ISDg, complete genome9e-0660BLASTN svgBLASTP svg