Pre_GI: BLASTN Hits

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Query: NC_010001:312500 Clostridium phytofermentans ISDg, complete genome

Start: 312500, End: 332099, Length: 19600

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015275:3594890*3594890363588740998Clostridium lentocellum DSM 5427 chromosome, complete genome8e-37163BLASTN svgBLASTP svg
NC_010001:45860004586000460866422665Clostridium phytofermentans ISDg, complete genome2e-28135BLASTN svgBLASTP svg
NC_010001:2836995*2836995286257025576Clostridium phytofermentans ISDg, complete genome2e-28135BLASTN svgBLASTP svg
NC_019978:21893942189394220827218879Halobacteroides halobius DSM 5150, complete genome5e-23117BLASTN svgBLASTP svg
NC_003909:4854379*4854379490241548037Bacillus cereus ATCC 10987, complete genome7e-22113BLASTN svgBLASTP svg
NC_008600:4898000*4898000493385035851Bacillus thuringiensis str. Al Hakam, complete genome4e-20107BLASTN svgBLASTP svg
NC_012472:4908245*4908245494735239108Bacillus cereus 03BB102, complete genome4e-20107BLASTN svgBLASTP svg
NC_015977:2718437*2718437274615427718Roseburia hominis A2-183 chromosome, complete genome4e-20107BLASTN svgBLASTP svg
NC_006274:4940922*4940922497759936678Bacillus cereus E33L, complete genome3e-18101BLASTN svgBLASTP svg
NC_014829:3822125*3822125385383631712Bacillus cellulosilyticus DSM 2522 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_011999:53093053093055100020071Macrococcus caseolyticus JCSC5402, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_003997:4876415*4876415492062744213Bacillus anthracis str. Ames, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_005945:48777524877752489660018849Bacillus anthracis str. Sterne, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_005957:48833064883306490202618721Bacillus thuringiensis serovar konkukian str. 97-27, complete7e-1693.7BLASTN svgBLASTP svg
NC_007530:4877500*4877500491960442105Bacillus anthracis str. 'Ames Ancestor', complete genome7e-1693.7BLASTN svgBLASTP svg
NC_014410:61599261599263822422233Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,4e-1487.7BLASTN svgBLASTP svg
NC_010184:4909183*4909183495059941417Bacillus weihenstephanensis KBAB4, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_007350:20196232019623203854618924Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,6e-1383.8BLASTN svgBLASTP svg
NC_014483:47728564772856479609923244Paenibacillus polymyxa E681 chromosome, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_004722:50578255057825508539627572Bacillus cereus ATCC 14579, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_008309:18278091827809185114023332Haemophilus somnus 129PT, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015160:1961789*1961789198445222664Odoribacter splanchnicus DSM 20712 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_012416:852000*85200087409922100Wolbachia sp. wRi, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008710:900586*90058692799927414Borrelia turicatae 91E135, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_021182:35768153576815360061123797Clostridium pasteurianum BC1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015977:2807782*2807782284716939388Roseburia hominis A2-183 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015216:11028371102837114211939283Methanobacterium sp. AL-21 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011772:5021404*5021404506359942196Bacillus cereus G9842, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_000909:65790465790467588717984Methanocaldococcus jannaschii DSM 2661, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_014328:303063*30306337786274800Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_011898:1762000*1762000178502823029Clostridium cellulolyticum H10, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_007681:657351*65735168076123411Methanosphaera stadtmanae DSM 3091, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_005945:4898841*4898841492869029850Bacillus anthracis str. Sterne, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_010001:14880001488000151119123192Clostridium phytofermentans ISDg, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_013887:14029801402980142172718748Methanocaldococcus sp. FS406-22 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_014335:4848389*4848389487326124873Bacillus cereus biovar anthracis str. CI chromosome, complete9e-0969.9BLASTN svgBLASTP svg
NC_020410:33269443326944335777930836Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete9e-0969.9BLASTN svgBLASTP svg
NC_015562:43612843612845451718390Methanotorris igneus Kol 5 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014410:2149886*2149886217220922324Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,1e-0765.9BLASTN svgBLASTP svg
NC_011661:1411383*1411383143358622204Dictyoglomus turgidum DSM 6724, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_009089:32419183241918326675524838Clostridium difficile 630, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_004193:25220002522000254434522346Oceanobacillus iheyensis HTE831, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_002505:2537655*2537655256310125447Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete6e-0763.9BLASTN svgBLASTP svg
NC_009922:2672396*2672396269704024645Alkaliphilus oremlandii OhILAs, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015555:693461*69346171644522985Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete6e-0763.9BLASTN svgBLASTP svg
NC_014614:2434017*2434017245806724051Clostridium sticklandii, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_021066:32015003201500323157930080Raoultella ornithinolytica B6, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_019970:2190695*2190695221115020456Thermoanaerobacterium thermosaccharolyticum M0795, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014150:1006000*1006000102850522506Brachyspira murdochii DSM 12563 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010995:764567*76456778991125345Cellvibrio japonicus Ueda107, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_005957:4904000*4904000492427720278Bacillus thuringiensis serovar konkukian str. 97-27, complete2e-0661.9BLASTN svgBLASTP svg
NC_010544:45265145265147609923449Candidatus Phytoplasma australiense, complete genome9e-0660BLASTN svgBLASTP svg
NC_011527:1443076*1443076146250819433Coxiella burnetii CbuG_Q212, complete genome9e-0660BLASTN svgBLASTP svg
NC_011528:1282691*1282691130313820448Coxiella burnetii CbuK_Q154, complete genome9e-0660BLASTN svgBLASTP svg
NC_013192:664408*66440868591721510Leptotrichia buccalis DSM 1135, complete genome9e-0660BLASTN svgBLASTP svg
NC_013791:10337001033700105722423525Bacillus pseudofirmus OF4 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_009727:1542000*1542000156409922100Coxiella burnetii Dugway 7E9-12, complete genome9e-0660BLASTN svgBLASTP svg