Query: NC_010001:1745089 Clostridium phytofermentans ISDg, complete genome
Start: 1745089, End: 1775894, Length: 30806
Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria
General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010520:3674883* | 3674883 | 3698984 | 24102 | Clostridium botulinum A3 str. Loch Maree, complete genome | 0 | 1084 | BLASTN svg | BLASTP svg |
NC_014328:4316008 | 4316008 | 4344762 | 28755 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 0 | 1033 | BLASTN svg | BLASTP svg |
NC_012563:2384500 | 2384500 | 2402961 | 18462 | Clostridium botulinum A2 str. Kyoto, complete genome | 6e-150 | 539 | BLASTN svg | BLASTP svg |
NC_010723:1465097 | 1465097 | 1494599 | 29503 | Clostridium botulinum E3 str. Alaska E43, complete genome | 7e-134 | 486 | BLASTN svg | BLASTP svg |
NC_010674:1496500 | 1496500 | 1525660 | 29161 | Clostridium botulinum B str. Eklund 17B, complete genome | 7e-131 | 476 | BLASTN svg | BLASTP svg |
NC_004557:1553000 | 1553000 | 1570599 | 17600 | Clostridium tetani E88, complete genome | 2e-125 | 458 | BLASTN svg | BLASTP svg |
NC_009922:2556033 | 2556033 | 2584486 | 28454 | Alkaliphilus oremlandii OhILAs, complete genome | 5e-101 | 377 | BLASTN svg | BLASTP svg |
NC_014328:1286407 | 1286407 | 1308242 | 21836 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 2e-57 | 232 | BLASTN svg | BLASTP svg |
NC_013216:644408* | 644408 | 672163 | 27756 | Desulfotomaculum acetoxidans DSM 771, complete genome | 1e-45 | 192 | BLASTN svg | BLASTP svg |
NC_004557:2289135* | 2289135 | 2313287 | 24153 | Clostridium tetani E88, complete genome | 5e-36 | 161 | BLASTN svg | BLASTP svg |
NC_007907:4956500 | 4956500 | 4991641 | 35142 | Desulfitobacterium hafniense Y51, complete genome | 1e-27 | 133 | BLASTN svg | BLASTP svg |
NC_013517:1055854* | 1055854 | 1161670 | 105817 | Sebaldella termitidis ATCC 33386, complete genome | 1e-24 | 123 | BLASTN svg | BLASTP svg |
NC_009922:868262 | 868262 | 890204 | 21943 | Alkaliphilus oremlandii OhILAs, complete genome | 5e-24 | 121 | BLASTN svg | BLASTP svg |
NC_014614:284005* | 284005 | 318099 | 34095 | Clostridium sticklandii, complete genome | 3e-22 | 115 | BLASTN svg | BLASTP svg |
NC_008261:1048515 | 1048515 | 1072892 | 24378 | Clostridium perfringens ATCC 13124, complete genome | 2e-20 | 109 | BLASTN svg | BLASTP svg |
NC_003366:1091766 | 1091766 | 1116155 | 24390 | Clostridium perfringens str. 13, complete genome | 2e-20 | 109 | BLASTN svg | BLASTP svg |
NC_015275:4493500 | 4493500 | 4511632 | 18133 | Clostridium lentocellum DSM 5427 chromosome, complete genome | 1e-18 | 103 | BLASTN svg | BLASTP svg |
NC_010723:1967106 | 1967106 | 1991119 | 24014 | Clostridium botulinum E3 str. Alaska E43, complete genome | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_013192:63111 | 63111 | 93787 | 30677 | Leptotrichia buccalis DSM 1135, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_014654:1113116 | 1113116 | 1139338 | 26223 | Halanaerobium sp. 'sapolanicus' chromosome, complete genome | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_014376:1586649 | 1586649 | 1608729 | 22081 | Clostridium saccharolyticum WM1 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_019970:2080419 | 2080419 | 2099099 | 18681 | Thermoanaerobacterium thermosaccharolyticum M0795, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_010674:1822963 | 1822963 | 1842733 | 19771 | Clostridium botulinum B str. Eklund 17B, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_010001:1488000 | 1488000 | 1511191 | 23192 | Clostridium phytofermentans ISDg, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_018664:3009166* | 3009166 | 3048466 | 39301 | Clostridium acidurici 9a chromosome, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |