Pre_GI: BLASTN Hits

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Query: NC_010001:1745089 Clostridium phytofermentans ISDg, complete genome

Start: 1745089, End: 1775894, Length: 30806

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010520:3674883*3674883369898424102Clostridium botulinum A3 str. Loch Maree, complete genome01084BLASTN svgBLASTP svg
NC_014328:43160084316008434476228755Clostridium ljungdahlii ATCC 49587 chromosome, complete genome01033BLASTN svgBLASTP svg
NC_012563:23845002384500240296118462Clostridium botulinum A2 str. Kyoto, complete genome6e-150539BLASTN svgBLASTP svg
NC_010723:14650971465097149459929503Clostridium botulinum E3 str. Alaska E43, complete genome7e-134486BLASTN svgBLASTP svg
NC_010674:14965001496500152566029161Clostridium botulinum B str. Eklund 17B, complete genome7e-131476BLASTN svgBLASTP svg
NC_004557:15530001553000157059917600Clostridium tetani E88, complete genome2e-125458BLASTN svgBLASTP svg
NC_009922:25560332556033258448628454Alkaliphilus oremlandii OhILAs, complete genome5e-101377BLASTN svgBLASTP svg
NC_014328:12864071286407130824221836Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-57232BLASTN svgBLASTP svg
NC_013216:644408*64440867216327756Desulfotomaculum acetoxidans DSM 771, complete genome1e-45192BLASTN svgBLASTP svg
NC_004557:2289135*2289135231328724153Clostridium tetani E88, complete genome5e-36161BLASTN svgBLASTP svg
NC_007907:49565004956500499164135142Desulfitobacterium hafniense Y51, complete genome1e-27133BLASTN svgBLASTP svg
NC_013517:1055854*10558541161670105817Sebaldella termitidis ATCC 33386, complete genome1e-24123BLASTN svgBLASTP svg
NC_009922:86826286826289020421943Alkaliphilus oremlandii OhILAs, complete genome5e-24121BLASTN svgBLASTP svg
NC_014614:284005*28400531809934095Clostridium sticklandii, complete genome3e-22115BLASTN svgBLASTP svg
NC_008261:10485151048515107289224378Clostridium perfringens ATCC 13124, complete genome2e-20109BLASTN svgBLASTP svg
NC_003366:10917661091766111615524390Clostridium perfringens str. 13, complete genome2e-20109BLASTN svgBLASTP svg
NC_015275:44935004493500451163218133Clostridium lentocellum DSM 5427 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_010723:19671061967106199111924014Clostridium botulinum E3 str. Alaska E43, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_013192:63111631119378730677Leptotrichia buccalis DSM 1135, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_014654:11131161113116113933826223Halanaerobium sp. 'sapolanicus' chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_014376:15866491586649160872922081Clostridium saccharolyticum WM1 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_019970:20804192080419209909918681Thermoanaerobacterium thermosaccharolyticum M0795, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_010674:18229631822963184273319771Clostridium botulinum B str. Eklund 17B, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_010001:14880001488000151119123192Clostridium phytofermentans ISDg, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_018664:3009166*3009166304846639301Clostridium acidurici 9a chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg