Pre_GI: BLASTP Hits

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Query: NC_010001:986500:1005379 Clostridium phytofermentans ISDg, complete genome

Start: 1005379, End: 1006206, Length: 828

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015172:1621223:162676916267691627587819Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeCof-like hydrolase2e-70265
NC_009615:1305678:130759013075901308396807Parabacteroides distasonis ATCC 8503 chromosome, complete genomehaloacid dehalogenase7e-58224
NC_009615:1305678:1308655130865513098871233Parabacteroides distasonis ATCC 8503 chromosome, complete genomehaloacid dehalogenase3e-44179
NC_016610:61661:6247862478637101233Tannerella forsythia ATCC 43037 chromosome, complete genomecof family hydrolase6e-44177
NC_013171:228356:249644249644250441798Anaerococcus prevotii DSM 20548, complete genomeCof-like hydrolase9e-39160
NC_017179:2539031:256661025666102567431822Clostridium difficile BI1, complete genomehydrolase2e-33143
NC_013315:2531019:255859825585982559419822Clostridium difficile CD196 chromosome, complete genomehydrolase2e-33143
NC_013316:2623199:263915426391542639975822Clostridium difficile R20291, complete genomeputative hydrolase2e-33143
NC_015391:1013608:102168010216801022489810Carnobacterium sp. 17-4 chromosome, complete genomehydrolase, haloacid dehalogenase-like family1e-32140
NC_008528:331260:353818353818354633816Oenococcus oeni PSU-1, complete genomePredicted hydrolase of the HAD superfamily3e-29128
NC_011071:4235830:425838542583854259218834Stenotrophomonas maltophilia R551-3, complete genomeCof-like hydrolase9e-29127
NC_015949:2002752:200507320050732005873801Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeCof-like hydrolase1e-27123
NC_014652:666227:683550683550684350801Caldicellulosiruptor hydrothermalis 108 chromosome, completecof-like hydrolase3e-27122
NC_006582:2205154:220922722092272209967741Bacillus clausii KSM-K16, complete genomehydrolase, HAD superfamily4e-27122
NC_013171:228356:250441250441251250810Anaerococcus prevotii DSM 20548, complete genomeCof-like hydrolase5e-27121
NC_008532:469888:479842479842480663822Streptococcus thermophilus LMD-9, complete genomePredicted hydrolase of the HAD superfamily6e-27121
NC_017243:2778427:279515727951572795948792Brachyspira intermedia PWS/A chromosome, complete genomehydrolase, HAD superfamily9e-27120
NC_004567:343500:361057361057361872816Lactobacillus plantarum WCFS1, complete genomehydrolase, HAD superfamily, Cof family2e-26119
NC_006448:465656:475588475588476445858Streptococcus thermophilus LMG 18311, complete genomehypothetical protein2e-26119
NC_004337:3590323:387580438758043876616813Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-25117
NC_012470:678661:687445687445688272828Streptococcus equi subsp. zooepidemicus, complete genomehaloacid dehalogenase-like hydrolase4e-25115
NC_009253:3317533:331753333175333318339807Desulfotomaculum reducens MI-1 chromosome, complete genomecof family hydrolase2e-24112
NC_016641:3173250:317469231746923175489798Paenibacillus terrae HPL-003 chromosome, complete genomecof-like hydrolase2e-24112
NC_014622:1514416:151546515154651516265801Paenibacillus polymyxa SC2 chromosome, complete genomecof-like hydrolase5e-24111
NC_014483:1376500:137765913776591378459801Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein9e-24110
NC_019978:1816940:183881818388181839627810Halobacteroides halobius DSM 5150, complete genomeHAD-superfamily hydrolase, subfamily IIB5e-23108
NC_017033:678321:701958701958702770813Frateuria aurantia DSM 6220 chromosome, complete genomeHAD-superfamily hydrolase4e-23108
NC_014829:4511738:452419745241974524940744Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeCof-like hydrolase3e-23108
NC_014614:1259236:125923612592361260054819Clostridium sticklandii, complete genomeCof-like hydrolase3e-23108
NC_014376:189319:194322194322195155834Clostridium saccharolyticum WM1 chromosome, complete genomeCof-like hydrolase2e-22105
NC_014727:2010000:201216620121662012975810Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,hydrolase (had superfamily)4e-21102
NC_015949:2002752:202052120205212021360840Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeCof-like hydrolase7e-21101
NC_017243:517684:537454537454538257804Brachyspira intermedia PWS/A chromosome, complete genomehydrolase2e-2099.8
NC_014652:666227:667952667952668791840Caldicellulosiruptor hydrothermalis 108 chromosome, completecof-like hydrolase7e-2097.8
NC_010723:3133302:314657531465753147402828Clostridium botulinum E3 str. Alaska E43, complete genomephosphatase YidA9e-2097.4
NC_019978:1816940:183801218380121838818807Halobacteroides halobius DSM 5150, complete genomeHAD-superfamily hydrolase, subfamily IIB1e-1997.1
NC_014554:337268:353623353623354324702Lactobacillus plantarum subsp. plantarum ST-III chromosome,HAD superfamily hydrolase1e-1996.7
NC_014364:1990000:200470020047002005506807Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCof-like hydrolase6e-1994.7
NC_012225:1575432:157543215754321576235804Brachyspira hyodysenteriae WA1, complete genomeputative hydrolase2e-1892.8
NC_011725:1182000:118677711867771187586810Bacillus cereus B4264 chromosome, complete genomehaloacid dehalogenase-like family hydrolase3e-1892.4
NC_008262:1721496:172715317271531727983831Clostridium perfringens SM101, complete genomeHAD hydrolase, IIB family4e-1892
NC_009614:769851:784823784823785605783Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein5e-1891.7
NC_019978:1816940:183723118372311838019789Halobacteroides halobius DSM 5150, complete genomeHAD-superfamily hydrolase, subfamily IIB1e-1790.5
NC_015875:1926981:1942882194288219442731392Streptococcus pseudopneumoniae IS7493 chromosome, complete genomeputative HAD superfamily hydrolase1e-1790.5
NC_017095:1927118:194641719464171947253837Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeHAD-superfamily hydrolase1e-1790.5
NC_014921:22828:320763207632933858Mycoplasma fermentans M64 chromosome, complete genomehypothetical protein3e-1789.4
NC_020210:661236:680566680566681372807Geobacillus sp. GHH01, complete genomeputative Cof-like hydrolase3e-1789.4
NC_010546:981363:985127985127985957831Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceprobable Haloacid dehalogenase-like hydrolase, type 33e-1789
NC_013192:469771:492134492134492925792Leptotrichia buccalis DSM 1135, complete genomeCof-like hydrolase3e-1789
NC_014364:2904443:290646529064652907304840Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCof-like hydrolase5e-1788.2
NC_017316:2466244:246685424668542467633780Enterococcus faecalis OG1RF chromosome, complete genomehydrolase6e-1788.2
NC_013406:7024149:703855670385567039320765Paenibacillus sp. Y412MC10 chromosome, complete genomeCof-like hydrolase6e-1788.2
NC_004668:2938000:293874929387492939525777Enterococcus faecalis V583, complete genomehydrolase, haloacid dehalogenase-like family6e-1788.2
NC_016593:762216:795790795790796596807Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completephosphatase yitU9e-1787.4
NC_015496:2279829:228584922858492286667819Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeCof-like hydrolase4e-1685.5
NC_017243:2190000:219734521973452198130786Brachyspira intermedia PWS/A chromosome, complete genomeHydrolase 3, haloacid dehalogenase-like hydrolase5e-1685.1
NC_009009:540992:5475645475645489611398Streptococcus sanguinis SK36, complete genomeCof family protein, putative5e-1685.1
NC_013171:1506500:150790715079071508734828Anaerococcus prevotii DSM 20548, complete genomeCof-like hydrolase6e-1684.7
NC_013198:1030970:104658310465831047398816Lactobacillus rhamnosus GG, complete genomehydrolase, HAD superfamily, Cof family1e-1584
NC_014958:1335650:135193913519391352778840Deinococcus maricopensis DSM 21211 chromosome, complete genomeCof-like hydrolase2e-1583.2
NC_016077:113246:113246113246114127882Acidaminococcus intestini RyC-MR95 chromosome, complete genomehydrolase2e-1582.8
NC_016633:1130705:112990211299021130708807Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeHAD-superfamily hydrolase5e-1582
NC_013416:16493:281562815628974819Aggregatibacter actinomycetemcomitans D11S-1, complete genomephosphatase YbhA6e-1581.6
NC_013791:2273389:229280422928042293649846Bacillus pseudofirmus OF4 chromosome, complete genomehypothetical protein5e-1581.6
NC_016513:317197:330470330470331288819Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completephosphatase YbhA6e-1581.3
NC_015389:616430:686673686673687521849Coriobacterium glomerans PW2 chromosome, complete genomeCof-like hydrolase8e-1581.3
NC_015975:923812:928139928139928945807Lactobacillus ruminis ATCC 27782 chromosome, complete genomehydrolase, HAD superfamily2e-1479.7
NC_012466:1367099:1367099136709913684991401Streptococcus pneumoniae JJA, complete genomeCof family protein/peptidyl-prolyl cis-trans isomerase, cyclophilin type4e-1479
NC_011900:1451545:1455235145523514566351401Streptococcus pneumoniae ATCC 700669, complete genomecyclophilin type peptidyl-prolyl cis-trans isomerase protein4e-1479
NC_012468:1453763:1453763145376314551631401Streptococcus pneumoniae 70585, complete genomeCof family protein/peptidyl-prolyl cis-trans isomerase, cyclophilin type4e-1479
NC_008533:1380406:1380406138040613818061401Streptococcus pneumoniae D39, complete genomeCof family protein/peptidyl-prolyl cis-trans isomerase, cyclophilin type4e-1479
NC_003098:1372875:1372875137287513742751401Streptococcus pneumoniae R6, complete genomehypothetical protein4e-1479
NC_012469:1403412:1403412140341214048121401Streptococcus pneumoniae Taiwan19F-14, complete genomeCof family protein/peptidyl-prolyl cis-trans isomerase, cyclophilin type4e-1479
NC_015634:2933712:295134929513492952215867Bacillus coagulans 2-6 chromosome, complete genomeCof-like hydrolase7e-1478.2
NC_020291:4903981:490398149039814904769789Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeHAD-superfamily hydrolase, subfamily IIB6e-1478.2
NC_015275:3761889:378299337829933783811819Clostridium lentocellum DSM 5427 chromosome, complete genomeCof-like hydrolase5e-1478.2
NC_016023:1501553:150505515050551505972918Bacillus coagulans 36D1 chromosome, complete genomeCof-like hydrolase9e-1477.4
NC_017243:2190000:219896521989652199762798Brachyspira intermedia PWS/A chromosome, complete genomeHydrolase 3, haloacid dehalogenase-like hydrolase2e-1376.6
NC_014915:595569:600890600890601753864Geobacillus sp. Y412MC52 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IIB2e-1376.3
NC_013411:1454465:146094614609461461809864Geobacillus sp. Y412MC61, complete genomeHAD-superfamily hydrolase, subfamily IIB2e-1376.3
NC_013093:125363:129678129678130499822Actinosynnema mirum DSM 43827, complete genomeCof-like hydrolase8e-1374.3
NC_017342:2733215:274874327487432749612870Staphylococcus aureus subsp. aureus TCH60 chromosome, completeHAD superfamily hydrolase2e-1273.6
NC_002952:610462:614544614544615413870Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative haloacid dehalogenase-like hydrolase2e-1273.6
NC_016641:2700765:270717227071722707951780Paenibacillus terrae HPL-003 chromosome, complete genomehaloacid dehalogenase protein2e-1273.2
NC_017337:610000:615526615526616395870Staphylococcus aureus subsp. aureus ED133 chromosome, completehaloacid dehalogenase-like family hydrolase2e-1273.2
NC_002758:622000:627575627575628444870Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein2e-1272.8
NC_002745:597947:603329603329604198870Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein2e-1272.8
NC_009487:636616:643852643852644721870Staphylococcus aureus subsp. aureus JH9 chromosome, completecof family hydrolase2e-1272.8
NC_009632:640973:643728643728644597870Staphylococcus aureus subsp. aureus JH1 chromosome, completecof family hydrolase2e-1272.8
NC_013450:557109:564342564342565211870Staphylococcus aureus subsp. aureus ED98, complete genomeHAD superfamily hydrolase2e-1272.8
NC_016928:589223:593304593304594173870Staphylococcus aureus subsp. aureus M013 chromosome, completehydrolase2e-1272.8
NC_017343:566000:568857568857569726870Staphylococcus aureus subsp. aureus ECT-R 2, complete genomecof-like hydrolase family protein2e-1272.8
NC_017351:596000:601395601395602264870Staphylococcus aureus subsp. aureus 11819-97 chromosome, completehypothetical protein2e-1272.8
NC_003923:591000:593888593888594757870Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein2e-1272.8
NC_002953:588437:592519592519593388870Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative haloacid dehalogenase-like hydrolase2e-1272.8
NC_013893:2373730:238939823893982390267870Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeHydrolase (HAD superfamily)3e-1272.4
NC_017353:2353665:236691223669122367781870Staphylococcus lugdunensis N920143, complete genomeputative haloacid dehalogenase-like hydrolase3e-1272.4
NC_007622:567500:571874571874572743870Staphylococcus aureus RF122, complete genomehypothetical protein4e-1272
NC_002951:623461:630693630693631562870Staphylococcus aureus subsp. aureus COL, complete genomehydrolase, haloacid dehalogenase-like family5e-1271.6
NC_007795:541783:545864545864546733870Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein5e-1271.6
NC_010079:607000:609802609802610671870Staphylococcus aureus subsp. aureus USA300_TCH1516, completehydrolase5e-1271.6
NC_007793:606500:609260609260610129870Staphylococcus aureus subsp. aureus USA300, complete genomehydrolase, haloacid dehalogenase-like family5e-1271.6
NC_009641:597000:599782599782600651870Staphylococcus aureus subsp. aureus str. Newman chromosome,hydrolase, haloacid dehalogenase-like protein5e-1271.6
NC_016912:541500:545860545860546729870Staphylococcus aureus subsp. aureus VC40 chromosome, completeHAD superfamily hydrolase5e-1271.6
NC_017347:616000:618799618799619668870Staphylococcus aureus subsp. aureus T0131 chromosome, completeHydrolase, haloacid dehalogenase-like protein5e-1271.6
NC_012780:284336:308286308286309122837Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequencehypothetical protein6e-1271.2
NC_018704:645843:647533647533648324792Amphibacillus xylanus NBRC 15112, complete genomeputative hydrolase8e-1271.2
NC_017243:2190000:219815321981532198941789Brachyspira intermedia PWS/A chromosome, complete genomeHydrolase 3, haloacid dehalogenase-like hydrolase9e-1270.9
NC_007633:952728:965268965268966110843Mycoplasma capricolum subsp. capricolum ATCC 27343, completehydrolase, haloacid dehalogenase-like family, putative1e-1170.5
NC_014751:946155:958727958727959569843Mycoplasma leachii PG50 chromosome, complete genomeHAD hydrolase, family IIB3e-1169.3
NC_008800:2695977:270877327087732709585813Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative hydrolase6e-1168.2
NC_015968:2110175:211500821150082115808801Enterobacter asburiae LF7a chromosome, complete genomeHAD-superfamily hydrolase6e-1168.2
NC_007168:2415361:243531424353142436183870Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein8e-1167.8
NC_020064:1409596:143654814365481437348801Serratia marcescens FGI94, complete genomeHAD-superfamily hydrolase, subfamily IIB8e-1167.8
NC_015389:809474:822759822759823694936Coriobacterium glomerans PW2 chromosome, complete genomeCof-like hydrolase9e-1167.4
NC_021175:1291707:131260313126031313415813Streptococcus oligofermentans AS 1.3089, complete genomehypothetical protein2e-1066.6
NC_006055:183823:198431198431199270840Mesoplasma florum L1, complete genomecof-like hydrolase, HAD-superfamily2e-1066.2
NC_016612:3361802:336611233661123366927816Klebsiella oxytoca KCTC 1686 chromosome, complete genomephosphatase YbjI4e-1065.5
NC_008277:428926:443902443902444744843Borrelia afzelii PKo, complete genomehydrolase4e-1065.5
NC_017238:427482:442458442458443300843Borrelia afzelii PKo chromosome, complete genomecof-like hydrolase family protein4e-1065.5
NC_014752:617987:617987617987618775789Neisseria lactamica ST-640, complete genomehypothetical protein5e-1065.1
NC_015921:425225:440198440198441010813Borrelia bissettii DN127 chromosome, complete genomecof-like hydrolase family protein6e-1064.7
NC_017341:618649:622754622754623599846Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,ABC superfamily ATP binding cassette transporter, ABC protein1e-0963.9
NC_006156:427358:442357442357443196840Borrelia garinii PBi chromosome linear, complete sequencehydrolase2e-0963.2
NC_015224:2701914:271536227153622716180819Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative hydrolase2e-0962.8
NC_014616:1415951:141784414178441418695852Bifidobacterium bifidum S17 chromosome, complete genomehydrolase8e-0960.8
NC_016941:574899:582150582150583019870Staphylococcus aureus subsp. aureus MSHR1132, complete genomeputative haloacid dehalogenase-like hydrolase1e-0860.5
NC_014921:777047:777047777047777895849Mycoplasma fermentans M64 chromosome, complete genomehydrolase of the had family4e-0858.9
NC_017068:2661419:269407726940772694883807Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative hydrolase7e-0857.8
NC_015224:4314116:431975643197564320553798Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein9e-0857.8
NC_008800:4389687:439605343960534396757705Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-0757.4
NC_020272:1384525:139059713905971391409813Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein3e-0755.8
NC_014833:2225233:224586422458642246682819Ruminococcus albus 7 chromosome, complete genomeCof-like hydrolase3e-0755.8
NC_015214:1458480:146038814603881461197810Lactobacillus acidophilus 30SC chromosome, complete genomehypothetical protein1e-0654.3
NC_017188:2512357:252437725243772525189813Bacillus amyloliquefaciens TA208 chromosome, complete genomehypothetical protein9e-0754.3
NC_017191:2514401:252642125264212527233813Bacillus amyloliquefaciens XH7 chromosome, complete genomehypothetical protein9e-0754.3
NC_009725:2517428:253352425335242534336813Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein2e-0653.1
NC_004545:15650:311893118931992804Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeputative haloacid dehalogenase-like hydrolase2e-0652.8
NC_014650:1410790:141282514128251413679855Geobacillus sp. Y4.1MC1 chromosome, complete genomeCof-like hydrolase3e-0652.8
NC_016052:842762:892192892192892680489Tetragenococcus halophilus NBRC 12172, complete genomeputative hydrolase4e-0652.4
NC_017191:2514401:252558325255832526386804Bacillus amyloliquefaciens XH7 chromosome, complete genomehydrolase4e-0652
NC_017188:2512357:252353925235392524342804Bacillus amyloliquefaciens TA208 chromosome, complete genomehypothetical protein4e-0652
NC_009725:2517428:253268825326882533491804Bacillus amyloliquefaciens FZB42, complete genomeputative hydrolase4e-0652
NC_019842:2575000:258672125867212587524804Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hydrolase7e-0651.2