Pre_GI: BLASTP Hits

Some Help

Query: NC_010001:986500:1001005 Clostridium phytofermentans ISDg, complete genome

Start: 1001005, End: 1002576, Length: 1572

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015690:4592582:4612557461255746141311575Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein6e-34145
NC_016935:2347691:2357210235721023587601551Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein3e-26120
NC_015690:1818333:1827340182734018288901551Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein3e-26120
NC_019897:1224798:1264380126438012660081629Thermobacillus composti KWC4 chromosome, complete genomesugar ABC transporter substrate-binding protein1e-21105
NC_014639:227118:2408102408102423331524Bacillus atrophaeus 1942 chromosome, complete genomelipoprotein7e-21102
CP002207:227118:2408102408102423331524Bacillus atrophaeus 1942, complete genomelipoprotein7e-21102
NC_015690:4592582:4617476461747646189781503Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein1e-1998.6
UCMB5137:303641:3193183193183208411524Bacillus atrophaeus UCMB-5137lipoprotein2e-1997.8
NC_000964:764118:7788667788667803741509Bacillus subtilis subsp. subtilis str. 168, complete genomelipoprotein6e-1996.3
NC_014915:1880748:1892356189235618940051650Geobacillus sp. Y412MC52 chromosome, complete genomeextracellular solute-binding protein family 16e-1995.9
NC_013411:2739989:2752418275241827540671650Geobacillus sp. Y412MC61, complete genomeextracellular solute-binding protein family 16e-1995.9
NC_014976:2981777:2997425299742529989331509Bacillus subtilis BSn5 chromosome, complete genomelipoprotein8e-1995.5
NC_009328:1867971:1876034187603418776771644Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeABC transporter substrate-binding protein1e-1894.7
NC_017195:742298:7570477570477585551509Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completelipoprotein LplA2e-1894.4
NC_016047:876875:8925298925298940371509Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completelipoprotein LplA3e-1894
NC_019896:3281193:3283105328310532846131509Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeLipoprotein LplA4e-1893.6
NC_020134:205000:2194692194692209261458Clostridium stercorarium subsp. stercorarium DSM 8532, completelipoprotein LipO3e-1893.6
NC_015690:1967244:2005630200563020071381509Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein3e-1893.6
NC_014479:736102:7497697497697513101542Bacillus subtilis subsp. spizizenii str. W23 chromosome, completelipoprotein8e-1892.4
NC_015588:475723:4863304863304879821653Isoptericola variabilis 225 chromosome, complete genomeextracellular solute-binding protein family 18e-1789
NC_016935:5017317:5032020503202050336031584Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein9e-1789
NC_015690:5263108:5277813527781352793961584Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein9e-1789
NC_013406:3583474:3619295361929536208961602Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-1687.4
NC_015152:2831566:2851234285123428528051572Spirochaeta sp. Buddy chromosome, complete genomeextracellular solute-binding protein family 17e-1685.9
NC_016641:1369424:1370725137072513719181194Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein9e-1685.5
NC_016935:1365463:1431909143190914335161608Paenibacillus mucilaginosus 3016 chromosome, complete genomeputative sugar ABC transporter6e-1582.8
NC_016935:2567039:2624595262459526261061512Paenibacillus mucilaginosus 3016 chromosome, complete genomeputative multiple sugar transport system substrate-binding protein YtcQ9e-1582
NC_015690:2039215:2075053207505320765641512Paenibacillus mucilaginosus KNP414 chromosome, complete genomeputative multiple sugar transport system substrate-binding protein YtcQ1e-1481.6
NC_013406:3851877:3867011386701138687111701Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-1481.6
NC_015690:3941113:4012501401250140141081608Paenibacillus mucilaginosus KNP414 chromosome, complete genomeputative sugar ABC transporter1e-1481.6
NC_016935:1306472:1327748132774813293731626Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-1480.9
NC_015732:684000:6981306981306997161587Spirochaeta caldaria DSM 7334 chromosome, complete genomeextracellular solute-binding protein family 13e-1480.5
NC_015690:3883243:3902653390265339042781626Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein3e-1480.5
NC_014410:989698:9937249937249953971674Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,extracellular solute-binding protein family 16e-1479.3
NC_019970:929666:9337029337029353751674Thermoanaerobacterium thermosaccharolyticum M0795, complete genomecarbohydrate ABC transporter substrate-binding protein, CUT1 family1e-1378.6
NC_013406:5066769:5112003511200351135981596Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-1378.2
NC_016935:4326644:4333504433350443350871584Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-1377.4
NC_015690:3941113:3942182394218239438461665Paenibacillus mucilaginosus KNP414 chromosome, complete genomeextracellular solute-binding protein7e-1375.9
NC_016935:1365463:1367350136735013690141665Paenibacillus mucilaginosus 3016 chromosome, complete genomeextracellular solute-binding protein7e-1375.9
NC_015555:1792242:1804740180474018064071668Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeextracellular solute-binding protein family 12e-1274.7
NC_013406:3583474:3586825358682535884531629Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-1274.3
NC_016641:3711972:3726839372683937284461608Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein6e-1272.8
NC_016582:10227196:1023986110239861102413931533Streptomyces bingchenggensis BCW-1 chromosome, complete genomeextracellular solute-binding protein3e-1170.9
NC_007333:1743890:1859713185971318613861674Thermobifida fusca YX, complete genomeABC-type sugar transport system periplasmic component4e-1170.1
NC_013526:105195:1131991131991142991101Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeextracellular solute-binding protein family 14e-1170.1
NC_013174:2564979:2566618256661825682791662Jonesia denitrificans DSM 20603, complete genomeextracellular solute-binding protein family 16e-1169.3
NC_013406:3819577:3842729384272938443961668Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein6e-1169.3
NC_009617:4436837:4459569445956944611851617Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeextracellular solute-binding protein7e-1169.3
NC_015690:4361000:4447186444718644488201635Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-1068.9
NC_016935:4117485:4213319421331942149531635Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-1067.8
NC_014652:163347:1770881770881787071620Caldicellulosiruptor hydrothermalis 108 chromosome, completeextracellular solute-binding protein family 13e-1067
NC_014657:1775929:1792442179244217940371596Caldicellulosiruptor owensensis OL chromosome, complete genomeextracellular solute-binding protein family 15e-1066.2
NC_014392:1935130:1937088193708819386831596Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeextracellular solute-binding protein family 15e-1066.2
NC_009437:2889466:2908437290843729100471611Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeextracellular solute-binding protein5e-0963.2
NC_004193:3325612:3341057334105733426911635Oceanobacillus iheyensis HTE831, complete genomehypothetical protein8e-0962.4
NC_012669:1493774:1496995149699514986411647Beutenbergia cavernae DSM 12333, complete genomeextracellular solute-binding protein family 11e-0862
NC_019970:929666:9492049492049505231320Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeABC-type sugar transport system, periplasmic component1e-0861.6
NC_014644:1532500:1554471155447115556941224Gardnerella vaginalis ATCC 14019 chromosome, complete genomeABC transporter binding protein2e-0861.2
NC_014720:154111:1804561804561820361581Caldicellulosiruptor kronotskyensis 2002 chromosome, completeextracellular solute-binding protein family 13e-0860.5
NC_014206:1745203:1759149175914917608191671Geobacillus sp. C56-T3 chromosome, complete genomefamily 1 extracellular solute-binding protein5e-0859.7
NC_014388:55903:5660356603580691467Butyrivibrio proteoclasticus B316 chromosome 2, complete genomesugar ABC transporter substrate-binding protein1e-0758.5
NC_010001:851671:8648768648768665461671Clostridium phytofermentans ISDg, complete genomeABC-type sugar transport system periplasmic component-like protein4e-0756.6
NC_015577:786155:7942287942287957811554Treponema azotonutricium ZAS-9 chromosome, complete genomebacterial extracellular solute-binding protein5e-0756.2
NC_015690:1818333:1874016187401618756681653Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein6e-0756.2
NC_016935:2347691:2403704240370424054431740Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein6e-0756.2
NC_003305:1:1636016360179281569Agrobacterium tumefaciens str. C58 chromosome linear, completeABC transporter, membrane spanning protein [sugar]2e-0654.7
NC_015434:2527412:2541157254115725427791623Verrucosispora maris AB-18-032 chromosome, complete genomefamily 1 extracellular solute-binding protein4e-0653.5