Pre_GI: BLASTP Hits

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Query: NC_010001:902506:920894 Clostridium phytofermentans ISDg, complete genome

Start: 920894, End: 921913, Length: 1020

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014387:3227875:3227875322787532289151041Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeNAD dependent epimerase/dehydratase4e-122437
NC_015588:475723:4790714790714800931023Isoptericola variabilis 225 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-81301
NC_013530:423540:4292754292754302761002Xylanimonas cellulosilytica DSM 15894, complete genomeNAD-dependent epimerase/dehydratase1e-78293
NC_014623:7550461:755403975540397555004966Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-57223
NC_014387:1362440:1372130137213013731461017Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeNAD-dependent epimerase/dehydratase2e-47189
NC_015500:533528:5469595469595480171059Treponema brennaborense DSM 12168 chromosome, complete genomeNAD-dependent epimerase/dehydratase6e-22105
NC_015164:325212:3290243290243300911068Bacteroides salanitronis DSM 18170 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-1894
NC_010162:2406976:2428834242883424298621029Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-1687
NC_007604:1875268:189622218962221897163942Synechococcus elongatus PCC 7942, complete genomemRNA-binding protein1e-1377.8
NC_009464:1479174:151566515156651516594930Uncultured methanogenic archaeon RC-I, complete genomeputative UDP-glucose 4-epimerase1e-1170.9
NC_002678:5714000:571812257181225719078957Mesorhizobium loti MAFF303099, complete genomehypothetical protein3e-1169.7
NC_020210:3169258:317488931748893175836948Geobacillus sp. GHH01, complete genomedTDP-glucose 4,6-dehydratase5e-1168.9
NC_013595:5221330:5225669522566952266731005Streptosporangium roseum DSM 43021, complete genomeNAD dependent epimerase/dehydratase family6e-1065.5
NC_014915:3259440:326265232626523263599948Geobacillus sp. Y412MC52 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-1065.5
NC_013411:3251500:325668332566833257630948Geobacillus sp. Y412MC61, complete genomeNAD-dependent epimerase/dehydratase5e-1065.5
NC_013929:2375613:2454632245463224556541023Streptomyces scabiei 87.22 chromosome, complete genomecarbohydrate epimerase9e-1064.7
NC_013407:1610221:161022116102211611135915Methanocaldococcus vulcanius M7, complete genomeNAD-dependent epimerase/dehydratase1e-0964.7
NC_018664:1795223:179522317952231796161939Clostridium acidurici 9a chromosome, complete genomeNAD-dependent epimerase/dehydratase family protein2e-0963.5
NC_007644:779376:787516787516788487972Moorella thermoacetica ATCC 39073, complete genomeNAD-dependent epimerase/dehydratase2e-0963.5
NC_008593:980731:995017995017996012996Clostridium novyi NT, complete genomeUDP-glucose 4-epimerase2e-0963.2
NC_015954:2764919:279891227989122799904993Halophilic archaeon DL31 chromosome, complete genomeNAD-dependent epimerase/dehydratase3e-0962.8
NC_006510:3133965:314990931499093150904996Geobacillus kaustophilus HTA426, complete genomedTDP-glucose 4,6-dehydratase6e-0962
NC_015660:391627:399813399813400808996Geobacillus thermoglucosidasius C56-YS93 chromosome, completeUDP-glucose 4-epimerase6e-0962
NC_013665:849508:857577857577858497921Methanocella paludicola SANAE, complete genomeputative nucleotide sugar epimerase/dehydratase1e-0861.2
NC_009725:3602632:361518136151813616128948Bacillus amyloliquefaciens FZB42, complete genomeSpsJ2e-0860.5
NC_012623:2173696:218423821842382185188951Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-0860.1
NC_009997:3661083:368015936801593681139981Shewanella baltica OS195, complete genomeNAD-dependent epimerase/dehydratase3e-0859.7
NC_002754:705741:711881711881712834954Sulfolobus solfataricus P2, complete genomedTDP-Glucose 4,6-dehydratase (rfbB-1)6e-0858.5
NC_013769:961072:964347964347965288942Sulfolobus islandicus L.D.8.5 chromosome, complete genomeNAD-dependent epimerase/dehydratase7e-0858.5
NC_015958:815442:818843818843819778936Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeNAD-dependent epimerase/dehydratase8e-0858.2
NC_015508:251354:256806256806257729924Agrobacterium sp. H13-3 chromosome linear, complete sequenceNAD-dependent epimerase/dehydratase8e-0858.2
NC_009138:1138917:115333211533321154261930Herminiimonas arsenicoxydans, complete genomeputative UDP-glucose-4-epimerase1e-0757.8
NC_007759:2638992:264236626423662643322957Syntrophus aciditrophicus SB, complete genomeNAD dependent epimerase/dehydratase family1e-0757.8
NC_015636:41968:537815378154755975Methanothermococcus okinawensis IH1 chromosome, complete genomeUDP-glucose 4-epimerase1e-0757.4
NC_007503:919808:934570934570935511942Carboxydothermus hydrogenoformans Z-2901, complete genomehypothetical protein4e-0755.8
NC_010501:1518959:152350415235041524448945Pseudomonas putida W619, complete genomeNAD-dependent epimerase/dehydratase5e-0755.5
NC_015666:1623790:164662216466221647545924Halopiger xanaduensis SH-6 chromosome, complete genomeUDP-glucose 4-epimerase6e-0755.1
NC_013887:17160:171601716018065906Methanocaldococcus sp. FS406-22 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-0654.3
NC_007406:2615916:2628719262871926297231005Nitrobacter winogradskyi Nb-255, complete genomeNAD-dependent epimerase/dehydratase1e-0654.3
NC_005363:1604337:161505316150531616036984Bdellovibrio bacteriovorus HD100, complete genomeprobable UDP-glucose 4-epimerase1e-0653.9
NC_005085:4335333:436215943621594363082924Chromobacterium violaceum ATCC 12472, complete genomeprobable nucleotide sugar dehydratase1e-0653.9
NC_009656:1994392:200497620049762005956981Pseudomonas aeruginosa PA7 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-0653.5
NC_000909:201000:202712202712203629918Methanocaldococcus jannaschii DSM 2661, complete genomeUDP-glucose 4-epimerase (galE)2e-0653.5
NC_013515:347671:380706380706381686981Streptobacillus moniliformis DSM 12112, complete genomeUDP-glucose 4-epimerase3e-0653.1
NC_015931:618445:632114632114633112999Pyrolobus fumarii 1A, complete genomedTDP-glucose 4,6-dehydratase4e-0652.8
NC_010003:1360472:141412614141261415067942Petrotoga mobilis SJ95, complete genomeNAD-dependent epimerase/dehydratase3e-0652.8
NC_020210:3341976:3397059339705933980721014Geobacillus sp. GHH01, complete genomedTDP-glucose 4,6-dehydratase3e-0652.8
NC_012623:2150000:215659721565972157517921Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeNAD-dependent epimerase/dehydratase4e-0652.4
NC_009699:2875386:287538628753862876303918Clostridium botulinum F str. Langeland chromosome, complete genomeNAD-dependent epimerase/dehydratase family protein5e-0652.4
NC_019964:1031660:105726310572631058246984Halovivax ruber XH-70, complete genomenucleoside-diphosphate-sugar epimerase8e-0651.6