Pre_GI: BLASTP Hits

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Query: NC_010001:473354:478875 Clostridium phytofermentans ISDg, complete genome

Start: 478875, End: 480161, Length: 1287

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:762000:7845137845137857991287Clostridium clariflavum DSM 19732 chromosome, complete genometrigger factor3e-103375
NC_009012:3224000:3231571323157132328571287Clostridium thermocellum ATCC 27405, complete genometrigger factor6e-101367
NC_011830:4645453:4646758464675846480381281Desulfitobacterium hafniense DCB-2, complete genometrigger factor3e-96352
NC_013315:3689422:3698958369895837003011344Clostridium difficile CD196 chromosome, complete genometrigger factor2e-94346
NC_009697:3409185:3418227341822734195191293Clostridium botulinum A str. ATCC 19397 chromosome, completetrigger factor4e-91335
NC_016584:5420823:5440964544096454422471284Desulfosporosinus orientis DSM 765 chromosome, complete genometrigger factor1e-90333
NC_011969:4140000:4170552417055241718291278Bacillus cereus Q1 chromosome, complete genometrigger factor4e-90332
NC_021182:1654903:1673454167345416747491296Clostridium pasteurianum BC1, complete genometrigger factor2e-89330
NC_012659:4273606:4282668428266842839451278Bacillus anthracis str. A0248, complete genometrigger factor2e-89330
NC_012472:4255729:4287373428737342886501278Bacillus cereus 03BB102, complete genometrigger factor2e-89330
NC_003997:4273579:4282641428264142839181278Bacillus anthracis str. Ames, complete genometrigger factor2e-89330
NC_004722:4405363:4428541442854144298181278Bacillus cereus ATCC 14579, complete genometrigger factor2e-89329
NC_014171:4317520:4343450434345043447271278Bacillus thuringiensis BMB171 chromosome, complete genometrigger factor2e-89329
NC_017208:4435573:4458117445811744593941278Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetrigger factor2e-89329
NC_019970:813917:8139178139178152151299Thermoanaerobacterium thermosaccharolyticum M0795, complete genometrigger factor5e-89328
NC_014335:4181710:4213358421335842146351278Bacillus cereus biovar anthracis str. CI chromosome, completetrigger factor5e-89328
NC_017294:327433:3365353365353378361302Candidatus Arthromitus sp. SFB-mouse-Yit, complete genometrigger factor protein3e-79295
NC_015391:1323171:1326977132697713282571281Carnobacterium sp. 17-4 chromosome, complete genometrigger factor1e-78294
NC_010424:1563033:1564967156496715662831317Candidatus Desulforudis audaxviator MP104C, complete genometrigger factor2e-71270
NC_013171:416279:4217064217064230611356Anaerococcus prevotii DSM 20548, complete genometrigger factor1e-69263
NC_013740:571879:5917435917435930591317Acidaminococcus fermentans DSM 20731, complete genometrigger factor4e-63242
NC_013517:2437574:2447293244729324485851293Sebaldella termitidis ATCC 33386, complete genometrigger factor8e-63241
NC_002939:1926084:1958330195833019596251296Geobacter sulfurreducens PCA, complete genometrigger factor1e-56220
NC_013929:6663889:6672015667201566734151401Streptomyces scabiei 87.22 chromosome, complete genomecell division trigger factor7e-56218
NC_021177:2451000:2461753246175324631471395Streptomyces fulvissimus DSM 40593, complete genomeTIG Trigger factor1e-55218
NC_016114:4922630:4930124493012449315241401Streptomyces flavogriseus ATCC 33331 chromosome, complete genometrigger factor1e-53210
NC_003888:2814360:2846000284600028474061407Streptomyces coelicolor A3(2), complete genometrigger factor1e-53210
NC_011979:2892119:2897032289703228983391308Geobacter sp. FRC-32, complete genometrigger factor5e-53208
NC_009483:2201986:2217011221701122183121302Geobacter uraniireducens Rf4 chromosome, complete genometrigger factor1e-52207
NC_007645:2204066:2209109220910922104491341Hahella chejuensis KCTC 2396, complete genometrigger factor7e-47188
NC_011768:1889853:1907526190752619088421317Desulfatibacillum alkenivorans AK-01, complete genometrigger factor7e-45181
NC_007759:1571425:1578705157870515800361332Syntrophus aciditrophicus SB, complete genometrigger factor, ppiase2e-44180
NC_017955:1667500:1685591168559116870751485Modestobacter marinus, complete genomepeptidyl-prolyl cis/trans isomerase, Trigger factor7e-44178
NC_014210:4053094:4065258406525840667031446Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,trigger factor2e-43177
NC_006055:456711:4746344746344759141281Mesoplasma florum L1, complete genometrigger factor, prolyl isomerase2e-42173
NC_007760:3848190:3862067386206738633561290Anaeromyxobacter dehalogenans 2CP-C, complete genometrigger factor5e-42172
NC_014355:220002:2285192285192298441326Candidatus Nitrospira defluvii, complete genometrigger factor (tF)1e-41171
NC_015581:771482:8025498025498038621314Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeTrigger factor1e-40167
NC_014314:576465:6532266532266546621437Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completetrigger factor3e-40166
NC_010524:2761394:2775259277525927765661308Leptothrix cholodnii SP-6, complete genometrigger factor3e-40166
NC_007940:1435701:1457403145740314587401338Rickettsia bellii RML369-C, complete genomeTrigger factor3e-40166
NC_014165:2888961:2901500290150029028911392Thermobispora bispora DSM 43833 chromosome, complete genometrigger factor7e-40165
NC_017328:385552:4080964080964093941299Shigella flexneri 2002017 chromosome, complete genometrigger factor Tig1e-39164
NC_004337:367687:3902323902323915301299Shigella flexneri 2a str. 301, complete genometrigger factor1e-39164
NC_015663:2694373:2732886273288627341841299Enterobacter aerogenes KCTC 2190 chromosome, complete genometrigger factor4e-38159
NC_008702:2259430:2274050227405022753631314Azoarcus sp. BH72, complete genometrigger factor4e-38159
NC_013771:1171251:1198270119827011996461377Cyanobacterium UCYN-A, complete genometrigger factor2e-37157
NC_019673:1420198:1440083144008314414411359Saccharothrix espanaensis DSM 44229 complete genomeTrigger factor2e-37157
NC_017098:1278712:1311226131122613125781353Spirochaeta africana DSM 8902 chromosome, complete genometrigger factor3e-37156
NC_020126:2883194:2896262289626228975391278Myxococcus stipitatus DSM 14675, complete genometrigger factor4e-37155
NC_011992:1179084:1183753118375311850631311Acidovorax ebreus TPSY, complete genometrigger factor6e-37155
NC_008782:1277117:1281785128178512830951311Acidovorax sp. JS42, complete genometrigger factor6e-37155
NC_004578:4204235:4208965420896542102751311Pseudomonas syringae pv. tomato str. DC3000, complete genometrigger factor7e-37155
NC_002947:2589951:2626913262691326282441332Pseudomonas putida KT2440, complete genometrigger factor7e-37155
NC_002927:2338549:2381475238147523827851311Bordetella bronchiseptica RB50, complete genometrigger factor1e-36154
NC_016148:1105669:1128861112886111302341374Thermovirga lienii DSM 17291 chromosome, complete genometrigger factor2e-36153
NC_007298:1824335:1847131184713118484351305Dechloromonas aromatica RCB, complete genometrigger factor1e-35151
NC_010645:1523867:1545996154599615473061311Bordetella avium 197N, complete genometrigger factor2e-35150
NC_008618:1206157:1223947122394712253171371Bifidobacterium adolescentis ATCC 15703, complete genometrigger factor2e-35150
NC_014550:2091797:2103916210391621052471332Arthrobacter arilaitensis Re117, complete genometrigger factor2e-35150
NC_004129:4596040:4606486460648646077961311Pseudomonas fluorescens Pf-5, complete genometrigger factor6e-35149
NC_009342:2528426:2543233254323325445821350Corynebacterium glutamicum R chromosome, complete genometrigger factor3e-35149
NC_010001:232976:2536762536762547161041Clostridium phytofermentans ISDg, complete genomepeptidylprolyl isomerase FKBP-type1e-34147
NC_002937:1395977:1409785140978514110861302Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetrigger factor2e-34147
NC_015578:1582827:1587188158718815885491362Treponema primitia ZAS-2 chromosome, complete genometrigger factor3e-34146
NC_013714:1521404:1539526153952615408961371Bifidobacterium dentium Bd1, complete genometig Trigger factor, PPIase4e-34145
NC_010995:2312901:2324459232445923257721314Cellvibrio japonicus Ueda107, complete genometrigger factor9e-34144
NC_015671:2371632:2374715237471523760761362Cellvibrio gilvus ATCC 13127 chromosome, complete genometrigger factor1e-33144
NC_015682:736746:7628807628807641751296Thermodesulfobacterium sp. OPB45 chromosome, complete genomeTrigger factor1e-32141
NC_021150:2348214:2358627235862723599371311Azotobacter vinelandii CA6, complete genometrigger factor1e-32140
NC_012560:2348202:2358615235861523599251311Azotobacter vinelandii DJ, complete genometrigger factor1e-32140
NC_017187:1580988:1599616159961616009171302Arcobacter butzleri ED-1, complete genometrigger factor2e-32140
NC_015222:2475792:2485807248580724871111305Nitrosomonas sp. AL212 chromosome, complete genometrigger factor8e-32138
NC_013170:1020339:1038234103823410398771644Cryptobacterium curtum DSM 15641, complete genometrigger factor9e-32138
NC_008025:430487:4445274445274458761350Deinococcus geothermalis DSM 11300, complete genometrigger factor-like protein3e-31136
NC_012039:1399699:1424174142417414254931320Campylobacter lari RM2100, complete genometrigger factor1e-29131
NC_014844:2028666:2030802203080220322261425Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometrigger factor1e-29130
NC_016632:1049510:1055164105516410564621299Serratia symbiotica str. 'Cinara cedri' chromosome, completetig peptidyl-prolyl cis/trans isomerase (trigger factor)2e-29130
NC_011661:1100576:1107924110792411092191296Dictyoglomus turgidum DSM 6724, complete genometrigger factor8e-29128
NC_013204:2234860:2260414226041422619191506Eggerthella lenta DSM 2243, complete genometrigger factor1e-28128
NC_013522:991649:99936699936610007091344Thermanaerovibrio acidaminovorans DSM 6589, complete genometrigger factor5e-27122
NC_020301:669000:6693446693446707711428Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genometrigger factor2e-26120
NC_014960:1835697:1857561185756118590301470Anaerolinea thermophila UNI-1, complete genometrigger factor1e-26120
NC_020300:646500:6486226486226500491428Bartonella australis Aust/NH1, complete genometrigger factor3e-26119
NC_007205:841818:8432268432268446591434Candidatus Pelagibacter ubique HTCC1062, complete genometrigger factor1e-20100
NC_008710:621822:6407986407986421441347Borrelia turicatae 91E135, complete genometrigger factor, ppiase1e-1997.8
NC_012440:1215838:1243221124322112445611341Persephonella marina EX-H1, complete genometrigger factor2e-1997.1
NC_018643:482676:4850734850734865211449Alpha proteobacterium HIMB5 chromosome, complete genometrigger factor5e-1995.9
NC_013894:543901:5547405547405560351296Thermocrinis albus DSM 14484 chromosome, complete genometrigger factor2e-1894.4
NC_003919:1203405:1231479123147912327711293Xanthomonas axonopodis pv. citri str. 306, complete genometrigger factor1e-1584.7
NC_007798:652317:6680866680866693871302Neorickettsia sennetsu str. Miyayama, complete genomeputative trigger factor2e-1480.9
NS_000195:1257834:1272654127265412739491296Candidatus Cloacamonas acidaminovoranshypothetical protein2e-1480.9
NC_007797:1016456:1032081103208110334001320Anaplasma phagocytophilum HZ, complete genomeputative trigger factor3e-1480.1
NC_017259:480656:4972764972764986041329Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,trigger factor8e-1168.6
NC_011565:777929:7798557798557811831329Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,trigger factor4e-0963.2
NC_004061:498483:5196985196985210261329Buchnera aphidicola str. Sg (Schizaphis graminum), complete genometrigger factor4e-0962.8
NC_004556:531000:5633185633185646131296Xylella fastidiosa Temecula1, complete genometrigger factor7e-0962
NC_010577:530917:5631265631265644211296Xylella fastidiosa M23, complete genometrigger factor7e-0962
NC_002488:1099975:1136247113624711375421296Xylella fastidiosa 9a5c, complete genometrigger factor1e-0861.2
NC_017256:515579:5192635192635205821320Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,trigger factor3e-0860.1
NC_002528:505951:5184355184355197631329Buchnera aphidicola str. APS (Acyrthosiphon pisum), completetrigger factor7e-0858.9
NC_015510:3543352:3572127357212735735421416Haliscomenobacter hydrossis DSM 1100 chromosome, complete genometrigger factor2e-0757.4
NC_017253:509494:5193365193365206641329Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,trigger factor3e-0756.6
NC_004663:4977635:4996162499616249975171356Bacteroides thetaiotaomicron VPI-5482, complete genomeFKBP-type peptidyl-prolyl cis-transisomerase (trigger factor)1e-0655.1
NC_015311:294283:2963902963902977571368Prevotella denticola F0289 chromosome, complete genometrigger factor1e-0654.7
NC_015846:790374:8108608108608121911332Capnocytophaga canimorsus Cc5 chromosome, complete genomepeptidyl-prolyl cis-trans isomerase, trigger factor2e-0654.3
NC_010814:3048441:307505630750563075991936Geobacter lovleyi SZ, complete genomepeptidylprolyl isomerase FKBP-type2e-0653.9
NC_017030:7514500:7522766752276675238601095Corallococcus coralloides DSM 2259 chromosome, complete genomeFKBP-type peptidyl-prolyl cis-trans isomerase6e-0652.4