Pre_GI: BLASTP Hits

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Query: NC_010001:4250828:4265471 Clostridium phytofermentans ISDg, complete genome

Start: 4265471, End: 4269316, Length: 3846

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012781:2148478:2171224217122421735962373Eubacterium rectale ATCC 33656, complete genomemannosyl-glycoprotein endo-beta-N-acetylglucosaminidase3e-83311
NC_014925:607843:6187906187906206791890Staphylococcus pseudintermedius HKU10-03 chromosome, completeBifunctional autolysin Atl / N-acetylmuramoyl-L- alanine amidase / Endo-beta-N- acetylglucosaminidase2e-1068.9
NC_006322:3628143:3645651364565136482812631Bacillus licheniformis ATCC 14580, complete genomeLytD2e-1068.9
NC_006270:3627974:3645482364548236481122631Bacillus licheniformis ATCC 14580, complete genomeN-acetylglucosaminidase (major autolysin), Glycoside Hydrolase Family 732e-1068.9
NC_016047:3632489:3655238365523836578802643Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeN-acetylglucosaminidase2e-1068.9
NC_017195:3459567:3476744347674434793862643Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeN-acetylglucosaminidase3e-1068.6
NC_009848:3190619:3212293321229332149232631Bacillus pumilus SAFR-032, complete genomebeta-N-acetylhexosaminidase5e-1067.8
NC_016816:1852659:1857334185733418600452712Pantoea ananatis LMG 5342, complete genomeImpA family type VI secretion-associated protein6e-1067.8
NC_014479:3452484:3477338347733834799802643Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeexported N-acetylglucosaminidase8e-1067.4
NC_014976:1671594:1686023168602316886652643Bacillus subtilis BSn5 chromosome, complete genomeexported N-acetylglucosaminidase1e-0966.6
NC_020244:3490460:3513106351310635157242619Bacillus subtilis XF-1, complete genomeexported N-acetylglucosaminidase (major autolysin)9e-0963.5
NC_003366:1427785:1433358143335814367473390Clostridium perfringens str. 13, complete genomeprobable surface protein2e-0862.8
NC_009641:1979053:1984284198428419861821899Staphylococcus aureus subsp. aureus str. Newman chromosome,phage N-acetylglucosamidase3e-0862
NC_009641:1105075:1135944113594411378421899Staphylococcus aureus subsp. aureus str. Newman chromosome,phage N-acetylglucosamidase3e-0862
NC_007795:1922000:1928152192815219300501899Staphylococcus aureus subsp. aureus NCTC 8325, complete genomebifunctional autolysin precursor3e-0862
NC_009632:921759:9571689571689590661899Staphylococcus aureus subsp. aureus JH1 chromosome, completemannosyl-glycoprotein endo-beta-N-acetylglucosaminidase3e-0862
NC_009487:921884:9572939572939591911899Staphylococcus aureus subsp. aureus JH9 chromosome, completemannosyl-glycoprotein endo-beta-N-acetylglucosaminidase3e-0862
NC_007622:1842000:1848869184886918507731905Staphylococcus aureus RF122, complete genomephage-related cell wall hydrolase4e-0861.2
NC_007168:2349894:2357588235758823595311944Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein4e-0758.2
NC_017341:1976000:1982641198264119845151875Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,phage N-acetylglucosaminidase4e-0758.2