Pre_GI: BLASTP Hits

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Query: NC_010001:4250828:4262906 Clostridium phytofermentans ISDg, complete genome

Start: 4262906, End: 4263427, Length: 522

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011899:86800:102658102658103170513Halothermothrix orenii H 168, complete genomeUvrB/UvrC protein1e-2099
NC_012778:688621:690234690234690833600Eubacterium eligens ATCC 27750, complete genomehypothetical protein3e-2097.8
NC_014654:2138794:214491221449122145457546Halanaerobium sp. 'sapolanicus' chromosome, complete genomeUvrB/UvrC protein4e-2097.4
NC_019970:336472:347392347392347919528Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeuncharacterized protein with conserved CXXC pairs2e-1994.7
NC_013316:1:411774117741671495Clostridium difficile R20291, complete genomeputative DNA repair protein3e-1994.4
NC_008593:196257:203395203395203919525Clostridium novyi NT, complete genomehypothetical protein6e-1890.1
NC_007644:161222:160716160716161225510Moorella thermoacetica ATCC 39073, complete genomeUvrB/UvrC protein1e-1789
NC_014328:4471995:447696144769614477509549Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative UvrB/UvrC domain-containing protein1e-1789
NC_011567:75306:894038940389954552Anoxybacillus flavithermus WK1, complete genomeModulator of heat shock repressor CtsR, McsA1e-1789
NC_014378:131810:144738144738145265528Acetohalobium arabaticum DSM 5501 chromosome, complete genomeUvrB/UvrC protein2e-1789
NC_018704:81733:107554107554108102549Amphibacillus xylanus NBRC 15112, complete genomeputative activator protein McsA2e-1788.2
NC_002570:126500:133288133288133821534Bacillus halodurans C-125, complete genomehypothetical protein4e-1787.4
NC_009012:2100000:211492921149292115435507Clostridium thermocellum ATCC 27405, complete genomeUvrB/UvrC protein2e-1685.1
NC_015425:198315:208071208071208586516Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein3e-1684.3
NC_014219:83888:102994102994103533540Bacillus selenitireducens MLS10 chromosome, complete genomeUvrB/UvrC protein1e-1582.8
NC_009706:165913:181847181847182395549Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein2e-1582
NC_011837:165913:181829181829182395567Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-1582
NC_017208:64500:969779697797525549Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeClpC ATPase3e-1581.3
NC_014171:71963:949069490695454549Bacillus thuringiensis BMB171 chromosome, complete genomeClpC ATPase3e-1581.3
NC_021182:4602683:460887346088734609397525Clostridium pasteurianum BC1, complete genomehypothetical protein7e-1580.1
NC_007503:2098980:210718721071872107705519Carboxydothermus hydrogenoformans Z-2901, complete genomeuvrB/uvrC motif domain protein7e-1579.7
NC_004193:79588:109929109929110486558Oceanobacillus iheyensis HTE831, complete genomehypothetical protein8e-1579.7
NC_020134:301500:304712304712305212501Clostridium stercorarium subsp. stercorarium DSM 8532, completeputative UvrB/UvrC protein1e-1479
NC_004557:2777291:278316727831672783685519Clostridium tetani E88, complete genomeputative clpC ATPase7e-1476.6
NC_015687:3326461:333256033325603333087528Clostridium acetobutylicum DSM 1731 chromosome, complete genomehypothetical protein1e-1375.9
NC_003030:3324834:333093333309333331460528Clostridium acetobutylicum ATCC 824, complete genomeUncharacterized conserved protein, containing ClpE-like Zn-zinger domain; YACH B.subtilis ortholog1e-1375.9
NC_012658:3827500:383246938324693832996528Clostridium botulinum Ba4 str. 657 chromosome, complete genomeUVR domain-containing protein2e-1375.5
NC_012563:4004709:400967240096724010199528Clostridium botulinum A2 str. Kyoto, complete genomeUVR domain protein2e-1375.1
NC_010520:3837378:384234238423423842869528Clostridium botulinum A3 str. Loch Maree, complete genomeUVR domain protein2e-1375.1
NC_010516:3807780:381274438127443813271528Clostridium botulinum B1 str. Okra, complete genomeUVR domain protein2e-1375.1
NC_009495:3735703:374174637417463742273528Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeUVR domain protein2e-1375.1
NC_009697:3711692:371773537177353718262528Clostridium botulinum A str. ATCC 19397 chromosome, completeUVR domain-containing protein2e-1375.1
NC_009698:3609881:361484436148443615371528Clostridium botulinum A str. Hall chromosome, complete genomeUVR domain-containing protein2e-1375.1
NC_009699:3839575:384453938445393845066528Clostridium botulinum F str. Langeland chromosome, complete genomeUVR domain-containing protein2e-1375.1
NC_017297:3838189:384315338431533843680528Clostridium botulinum F str. 230613 chromosome, complete genomeUVR domain protein2e-1375.1
NC_010674:192951:214143214143214718576Clostridium botulinum B str. Eklund 17B, complete genomeMcsA3e-1374.7
NC_010723:173280:215938215938216513576Clostridium botulinum E3 str. Alaska E43, complete genomeMcsA4e-1374.3
NC_014152:241776:260878260878261405528Thermincola sp. JR, complete genomeUvrB/UvrC protein6e-1373.6
NC_016884:256598:274479274479275024546Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeUvrB/UvrC protein1e-1272.8
NC_015757:263938:281819281819282364546Sulfobacillus acidophilus TPY chromosome, complete genomeUvrB/UvrC protein1e-1272.8
NC_019903:421000:426780426780427277498Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,hypothetical protein2e-1271.6
NC_012489:1874415:189729318972931897778486Gemmatimonas aurantiaca T-27, complete genomehypothetical protein1e-1169.3
NC_015913:1491393:152834615283461528879534Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomehypothetical protein2e-1168.6
NC_010382:4479464:449656944965694497117549Lysinibacillus sphaericus C3-41, complete genomehypothetical protein6e-1167