Pre_GI: BLASTP Hits

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Query: NC_010001:4128034:4146977 Clostridium phytofermentans ISDg, complete genome

Start: 4146977, End: 4148716, Length: 1740

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009828:1530732:1530732153073215324411710Thermotoga lettingae TMO, complete genomeFAD linked oxidase domain protein4e-174611
NC_012883:695652:7065837065837079801398Thermococcus sibiricus MM 739, complete genomeAlkyldihydroxyacetonephosphate synthase3e-55216
NC_014624:828943:8355378355378369671431Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-51204
NC_015314:89815:9812198121997461626Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, completeAlkylglycerone-phosphate synthase6e-42172
NC_014654:592582:6087916087916102931503Halanaerobium sp. 'sapolanicus' chromosome, complete genomeAlkylglycerone-phosphate synthase2e-41171
NC_014834:614890:6501286501286517801653Rhodopseudomonas palustris DX-1 chromosome, complete genomeFAD linked oxidase domain-containing protein2e-41170
NC_010676:2658495:2705635270563527072391605Burkholderia phytofirmans PsJN chromosome 2, complete sequenceFAD linked oxidase domain protein2e-37157
NC_016885:1732257:1747611174761117489571347Pyrobaculum oguniense TE7 chromosome, complete genomeFAD/FMN-containing dehydrogenase1e-34148
NC_009380:3563421:3578766357876635803731608Salinispora tropica CNB-440 chromosome, complete genomeFAD linked oxidase domain-containing protein3e-34147
NC_020126:7896447:7896447789644778983421896Myxococcus stipitatus DSM 14675, complete genomeFAD linked oxidase1e-33145
NC_002755:3465582:3471175347117534727581584Mycobacterium tuberculosis CDC1551, complete genomealkyl-dihydroxyacetonephosphate synthase, putative1e-32141
NC_012207:3421144:3422515342251534240981584Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative alkyldihydroxyacetonephosphate synthase1e-32141
NC_009525:3484924:3487534348753434891171584Mycobacterium tuberculosis H37Ra, complete genomealkyldihydroxyacetonephosphate synthase AgpS1e-32141
NC_000962:3474000:3475378347537834769611584Mycobacterium tuberculosis H37Rv, complete genomePOSSIBLE ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE AGPS (ALKYL-DHAP SYNTHASE) (ALKYLGLYCERONE-PHOSPHATE SYNTHASE)1e-32141
NC_002945:3429315:3431926343192634335091584Mycobacterium bovis AF2122/97, complete genomealkyldihydroxyacetonephosphate synthase AgpS1e-32141
NC_009565:3485772:3487143348714334887261584Mycobacterium tuberculosis F11, complete genomealkyldihydroxyacetonephosphate synthase agpS1e-32141
NC_008769:3427254:3429865342986534314481584Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative alkyldihydroxyacetonephosphate synthase agpS1e-32141
NC_016804:3407859:3409230340923034108131584Mycobacterium bovis BCG str. Mexico chromosome, complete genomealkyldihydroxyacetonephosphate synthase1e-32141
NC_009953:3852436:3868554386855438701641611Salinispora arenicola CNS-205 chromosome, complete genomeFAD linked oxidase domain-containing protein4e-32139
NC_016943:4799915:4821215482121548227951581Blastococcus saxobsidens DD2, complete genomeFAD linked oxidase4e-31136
NC_014758:1387470:1406337140633714077161380Calditerrivibrio nitroreducens DSM 19672 chromosome, completefad linked oxidase domain protein4e-21103
NC_015499:1466794:1475394147539414768001407Thermodesulfobium narugense DSM 14796 chromosome, complete genomeD-lactate dehydrogenase (cytochrome)3e-21103
NC_008786:18688:3591335913373251413Verminephrobacter eiseniae EF01-2, complete genomeFAD linked oxidase domain protein1e-20102
NC_014831:2082304:2093372209337220947511380Thermaerobacter marianensis DSM 12885 chromosome, complete genomeFAD linked oxidase domain protein8e-2099
NC_013209:2384826:2384826238482623862531428Acetobacter pasteurianus IFO 3283-01, complete genomeD-Lactate dehydrogenase1e-1895.1
NC_017100:2383487:2386033238603323874601428Acetobacter pasteurianus IFO 3283-03, complete genomeD-Lactate dehydrogenase1e-1895.1
NC_017108:2383370:2383370238337023847971428Acetobacter pasteurianus IFO 3283-12, complete genomeD-Lactate dehydrogenase1e-1895.1
NC_017111:2383388:2383388238338823848151428Acetobacter pasteurianus IFO 3283-32, complete genomeD-Lactate dehydrogenase1e-1895.1
NC_017121:2383375:2383375238337523848021428Acetobacter pasteurianus IFO 3283-07, complete genomeD-Lactate dehydrogenase1e-1895.1
NC_017125:2383467:2386013238601323874401428Acetobacter pasteurianus IFO 3283-22, complete genomeD-Lactate dehydrogenase1e-1895.1
NC_017146:2383509:2386055238605523874821428Acetobacter pasteurianus IFO 3283-26, complete genomeD-Lactate dehydrogenase1e-1895.1
NC_017150:2290681:2292572229257222939991428Acetobacter pasteurianus IFO 3283-01-42C, complete genomeD-Lactate dehydrogenase1e-1895.1
NC_006510:2044347:2059856205985620612651410Geobacillus kaustophilus HTA426, complete genomeglycolate oxidase subunit9e-1892.4
NC_011894:585637:5856375856375870551419Methylobacterium nodulans ORS 2060, complete genomeFAD linked oxidase domain protein3e-1790.5
NC_016027:346768:3636443636443650981455Gluconacetobacter xylinus NBRC 3288, complete genomeD-Lactate dehydrogenase5e-1789.7
NC_008595:1349579:1370245137024513716121368Mycobacterium avium 104, complete genomeoxidoreductase, FAD-binding2e-1584.3
NC_010794:1476494:1494414149441414958051392Methylacidiphilum infernorum V4, complete genomeGlycolate dehydrogenase subunit GlcD3e-1584
NC_014206:3391352:3405264340526434066251362Geobacillus sp. C56-T3 chromosome, complete genomeFAD linked oxidase7e-1582.8
NC_015436:1758257:1780777178077717821921416Spirochaeta coccoides DSM 17374 chromosome, complete genomeD-lactate dehydrogenase (cytochrome)8e-1582.4
NC_009376:420000:4372904372904387051416Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeD-lactate dehydrogenase9e-1582.4
NC_010674:370629:3706293706293720321404Clostridium botulinum B str. Eklund 17B, complete genomeFAD/FMN-containing dehydrogenase1e-1481.6
NC_017276:320000:3343853343853357281344Sulfolobus islandicus REY15A chromosome, complete genomeFAD linked oxidase domain-containing protein2e-1481.3
NC_013769:316789:3308183308183321731356Sulfolobus islandicus L.D.8.5 chromosome, complete genomeD-lactate dehydrogenase2e-1481.3
NC_012622:327821:3371743371743385291356Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeFAD linked oxidase domain-containing protein2e-1481.3
NC_012623:2369671:2373007237300723743621356Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeFAD linked oxidase domain-containing protein2e-1481.3
NC_014831:2082304:2110694211069421126761983Thermaerobacter marianensis DSM 12885 chromosome, complete genomeFAD linked oxidase domain protein2e-1480.9
NC_003911:633393:6561466561466575431398Silicibacter pomeroyi DSS-3, complete genomeoxidoreductase, FAD-binding3e-1480.5
NC_016584:4478200:4482583448258344840941512Desulfosporosinus orientis DSM 765 chromosome, complete genomeFAD/FMN-dependent dehydrogenase6e-1479.7
NC_009699:1122000:1135055113505511364521398Clostridium botulinum F str. Langeland chromosome, complete genomeglycolate oxidase1e-1378.6
NC_010003:123297:1328391328391342571419Petrotoga mobilis SJ95, complete genomeFAD linked oxidase domain protein2e-1378.2
NC_010520:1146000:1165186116518611665831398Clostridium botulinum A3 str. Loch Maree, complete genomeputative glycolate oxidase3e-1377
NC_008699:2294361:2303931230393123052861356Nocardioides sp. JS614, complete genomeD-lactate dehydrogenase (cytochrome)5e-1376.6
NC_015731:402280:4175584175584189311374Nitrosomonas sp. Is79A3 chromosome, complete genomeFAD linked oxidase domain-containing protein8e-1375.9
NC_007643:889755:9286959286959301431449Rhodospirillum rubrum ATCC 11170, complete genomeD-lactate dehydrogenase (cytochrome)1e-1275.5
NC_010723:1379256:1389943138994313913791437Clostridium botulinum E3 str. Alaska E43, complete genomeoxidase, FAD-binding1e-1275.5
NC_007503:1111457:1155204115520411565801377Carboxydothermus hydrogenoformans Z-2901, complete genomeglycolate oxidase, GlcD subunit1e-1275.1
NC_014328:2203437:2213403221340322148091407Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative FAD/FMN-containing dehydrogenase1e-1275.1
NC_014328:2518081:2542973254297325443551383Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative FAD/FMN-containing dehydrogenase2e-1274.7
NC_010674:1390473:1398740139874014001761437Clostridium botulinum B str. Eklund 17B, complete genomeoxidase, FAD-binding2e-1274.7
NC_012108:946314:9655979655979669701374Desulfobacterium autotrophicum HRM2, complete genomeGlcD12e-1274.3
NC_009440:1045882:1045882104588210472401359Metallosphaera sedula DSM 5348 chromosome, complete genomeD-lactate dehydrogenase4e-1273.6
NC_007181:163640:1672631672631686391377Sulfolobus acidocaldarius DSM 639, complete genomeglycolate oxidase subunit7e-1272.8
NC_018643:1309804:1318252131825213197451494Alpha proteobacterium HIMB5 chromosome, complete genomeFAD-dependent oxidoreductase family protein,FAD-binding protein7e-1272.8
NC_015733:3736104:3783876378387637853751500Pseudomonas putida S16 chromosome, complete genomeglycolate oxidase, GlcD subunit8e-1272.4
NC_014540:2828299:2854805285480528561931389Burkholderia sp. CCGE1003 chromosome 2, complete sequenceFAD linked oxidase domain-containing protein8e-1272.4
NC_017295:2630179:2649449264944926508521404Clostridium acetobutylicum EA 2018 chromosome, complete genomeFAD/FMN-containing dehydrogenase8e-1272.4
NC_003030:2630931:2650203265020326516061404Clostridium acetobutylicum ATCC 824, complete genomeFAD/FMN-containing dehydrogenase8e-1272.4
NC_015687:2632557:2651829265182926532321404Clostridium acetobutylicum DSM 1731 chromosome, complete genomeFAD/FMN-containing dehydrogenase8e-1272.4
NC_004757:1089057:1096562109656210979291368Nitrosomonas europaea ATCC 19718, complete genomeD-lactate dehydrogenase1e-1172
NC_015145:3236445:3272686327268632740561371Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeglycolate oxidase subunit GlcD4e-1170.5
NC_015856:3436951:3451363345136334527751413Collimonas fungivorans Ter331 chromosome, complete genomeputative oxidoreductase6e-1169.7
NC_003295:1654000:1672034167203416734461413Ralstonia solanacearum GMI1000, complete genomePROBABLE OXIDOREDUCTASE PROTEIN6e-1169.7
NC_004129:4434259:4436707443670744381311425Pseudomonas fluorescens Pf-5, complete genomeoxidoreductase, FAD-binding7e-1169.3
NC_015733:3595882:3617787361778736192861500Pseudomonas putida S16 chromosome, complete genomeglycolate oxidase, GlcD subunit7e-1169.3
NC_011830:4645453:4651433465143346528121380Desulfitobacterium hafniense DCB-2, complete genomeD-lactate dehydrogenase (cytochrome)8e-1169.3
NC_011283:1811000:1857329185732918586841356Klebsiella pneumoniae 342 chromosome, complete genomeoxidase, FAD-binding1e-1068.9
NC_016948:2129335:2130002213000221313871386Mycobacterium intracellulare MOTT-64 chromosome, complete genomeputative dehydrogenase9e-1168.9
NC_010513:1443787:1462870146287014642581389Xylella fastidiosa M12 chromosome, complete genomeoxidoreductase1e-1068.6
NC_011891:3369170:3370396337039633718621467Anaeromyxobacter dehalogenans 2CP-1, complete genomeD-lactate dehydrogenase (cytochrome)2e-1068.2
NC_015976:3118804:3142008314200831434561449Sphingobium sp. SYK-6, complete genomeputative dehydrogenase/oxidoreductase2e-1068.2
NC_017179:1239991:1239991123999112413821392Clostridium difficile BI1, complete genomeFAD/FMN-containing dehydrogenase2e-1067.8
NC_013315:1230214:1230214123021412316051392Clostridium difficile CD196 chromosome, complete genomeFAD/FMN-containing dehydrogenase2e-1067.8
NC_013316:1225797:1227830122783012292211392Clostridium difficile R20291, complete genomeputative FAD/FMN-containing dehydrogenase2e-1067.8
NC_018524:4988810:4994343499434349957101368Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeFAD linked oxidase, C-terminal domain protein2e-1067.8
NC_003364:756813:7568137568137582401428Pyrobaculum aerophilum str. IM2, complete genomeglycolate oxidase subunit glcD3e-1067.4
NC_015151:1162647:1178190117819011795991410Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeglycolate oxidase subunit D3e-1067
NC_010577:1456909:1476773147677314781611389Xylella fastidiosa M23, complete genomeFAD linked oxidase domain protein4e-1067
NC_006677:1255079:1277697127769712791031407Gluconobacter oxydans 621H, complete genomePutative lactate dehydrogenase5e-1066.6
NC_013854:2714033:2716318271631827177331416Azospirillum sp. B510, complete genomeFAD/FMN-containing dehydrogenases7e-1066.2
NC_018681:5378197:5409649540964954110101362Nocardia brasiliensis ATCC 700358 chromosome, complete genomefad linked oxidase domain-containing protein1e-0965.5
NC_016947:2210339:2210339221033922117241386Mycobacterium intracellulare MOTT-02 chromosome, complete genomeputative dehydrogenase1e-0965.5
NC_017904:2162045:2162045216204521634301386Mycobacterium sp. MOTT36Y chromosome, complete genomedehydrogenase1e-0965.1
NC_008268:3418000:3421935342193534233051371Rhodococcus sp. RHA1, complete genomeprobable D-lactate dehydrogenase (cytochrome)1e-0965.1
NC_011830:4645453:4652832465283246541241293Desulfitobacterium hafniense DCB-2, complete genomeFAD linked oxidase domain protein3e-0963.9
NC_012982:1569426:1577073157707315786861614Hirschia baltica ATCC 49814, complete genomeFAD linked oxidase domain protein4e-0963.5
NC_008319:1829571:1829571182957118310881518Synechococcus sp. CC9311, complete genomeglycolate oxidase subunit4e-0963.5
NC_014311:1635408:1659710165971016611221413Ralstonia solanacearum PSI07 chromosome, complete genomelactate dehydrogenase7e-0962.8
NC_014834:614890:6401306401306415661437Rhodopseudomonas palustris DX-1 chromosome, complete genomeFAD linked oxidase domain-containing protein8e-0962.4
NC_009617:3360990:3366532336653233679591428Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeFAD linked oxidase domain-containing protein9e-0962.4
NC_010125:3393368:3414558341455834160271470Gluconacetobacter diazotrophicus PAl 5, complete genomeputative D-lactate dehydrogenase3e-0860.5
NC_009253:389835:3908653908653922711407Desulfotomaculum reducens MI-1 chromosome, complete genomeFAD linked oxidase domain-containing protein9e-0858.9
NC_012982:1597697:1597697159769715993101614Hirschia baltica ATCC 49814, complete genomeFAD linked oxidase domain protein1e-0758.5
NC_010524:3302398:3321035332103533224591425Leptothrix cholodnii SP-6, complete genomeFAD linked oxidase domain protein2e-0757.8
NC_008228:2068641:2085974208597420890153042Pseudoalteromonas atlantica T6c, complete genomeFAD linked oxidase-like5e-0756.6
NC_015275:4577642:4588652458865245900161365Clostridium lentocellum DSM 5427 chromosome, complete genomeD-lactate dehydrogenase (cytochrome)1e-0655.5
NC_020911:3076791:3081892308189230833131422Octadecabacter antarcticus 307, complete genomeputative D-lactate dehydrogenase2e-0655.1
NC_004431:3513147:3541181354118135426801500Escherichia coli CFT073, complete genomeGlycolate oxidase subunit glcD2e-0654.7
NC_015145:3236445:3266407326640732692532847Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeFAD/FMN-dependent dehydrogenase2e-0654.7
NC_008702:1094663:1103397110339711048031407Azoarcus sp. BH72, complete genomeputative glycolate oxidase subunit GlcD2e-0654.3
NC_002754:1968668:1986907198690719899093003Sulfolobus solfataricus P2, complete genomeDehydrogenase, putative3e-0654.3
NC_017276:2481083:2500916250091625039183003Sulfolobus islandicus REY15A chromosome, complete genomeFAD linked oxidase domain-containing protein3e-0654.3
NC_012726:2549813:2564717256471725677193003Sulfolobus islandicus M.16.4 chromosome, complete genomeFAD linked oxidase domain-containing protein3e-0653.9
NC_017275:2615814:2633123263312326361253003Sulfolobus islandicus HVE10/4 chromosome, complete genomeFAD linked oxidase domain-containing protein3e-0653.9
NC_012589:2698556:2714345271434527173473003Sulfolobus islandicus L.S.2.15, complete genomeFAD linked oxidase domain protein3e-0653.9
NC_012632:2654200:2670471267047126734733003Sulfolobus islandicus M.16.27 chromosome, complete genomeFAD linked oxidase domain-containing protein3e-0653.9
NC_013769:2685000:2700105270010527031073003Sulfolobus islandicus L.D.8.5 chromosome, complete genomeFAD linked oxidase domain-containing protein3e-0653.9
NC_015859:1631573:1631573163157316329401368Corynebacterium variabile DSM 44702 chromosome, complete genomeoxidoreductase3e-0653.9
NC_014722:1084616:1110430111043011118751446Burkholderia rhizoxinica HKI 454, complete genomeFAD/FMN-containing dehydrogenases3e-0653.9
NC_012623:2774910:2790237279023727932393003Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeFAD linked oxidase domain-containing protein3e-0653.9
NC_015138:322386:3373913373913386141224Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeFAD linked oxidase domain-containing protein4e-0653.5
NC_004431:3513147:3540129354012935411811053Escherichia coli CFT073, complete genome6e-0653.1