Some Help

Query: NC_010001:3895264:3896293 Clostridium phytofermentans ISDg, complete genome

Start: 3896293, End: 3897282, Length: 990

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014622:3955851:3957877395787739588811005Paenibacillus polymyxa SC2 chromosome, complete genomeaminoglycoside phosphotransferase3e-32139
NC_015690:6521740:653269965326996533664966Paenibacillus mucilaginosus KNP414 chromosome, complete genomeaminoglycoside phosphotransferase1e-1584.3
NC_015376:3320818:334712033471203348049930Burkholderia gladioli BSR3 chromosome chromosome 2, completeputative Homoserine kinase4e-1582.4
NC_008095:2117952:2119709211970921207191011Myxococcus xanthus DK 1622, complete genomephosphotransferase1e-0654.3