Pre_GI: BLASTP Hits

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Query: NC_010001:3421710:3443643 Clostridium phytofermentans ISDg, complete genome

Start: 3443643, End: 3445703, Length: 2061

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014376:317312:3375993375993396592061Clostridium saccharolyticum WM1 chromosome, complete genomeformate acetyltransferase01100
NC_015977:442493:4755774755774778052229Roseburia hominis A2-183 chromosome, complete genomeformate acetyltransferase0999
NC_017343:224777:2247772247772270262250Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeformate acetyltransferase0992
NC_015275:1223088:1243865124386512460932229Clostridium lentocellum DSM 5427 chromosome, complete genomeformate acetyltransferase0934
NC_015555:49842:7171371713739412229Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeformate acetyltransferase0920
NC_019970:35985:5853358533607612229Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeformate acetyltransferase 10917
NC_004347:3028000:3042162304216230444442283Shewanella oneidensis MR-1, complete genomeformate acetyltransferase0897
NC_009801:995396:1017186101718610194682283Escherichia coli E24377A, complete genomeformate acetyltransferase0885
NC_015709:1769806:1795826179582617981412316Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeformate acetyltransferase0885
NC_013410:1285857:1287270128727012895252256Fibrobacter succinogenes subsp. succinogenes S85 chromosome,formate acetyltransferase0880
NC_018750:3315309:3327502332750233297812280Streptomyces venezuelae ATCC 10712, complete genomePyruvate formate-lyase0874
NC_009831:2045811:2046645204664520489272283Shewanella sediminis HAW-EB3, complete genomeFormate C-acetyltransferase0873
NC_011094:1050700:1063602106360210658842283Salmonella enterica subsp. enterica serovar Schwarzengrund strformate acetyltransferase0870
NC_014618:586240:6080576080576103512295Enterobacter cloacae SCF1 chromosome, complete genomeformate acetyltransferase0846
NC_007712:1601499:1624825162482516271072283Sodalis glossinidius str. 'morsitans', complete genomeformate acetyltransferase 10844
NC_008258:3224721:3226560322656032288542295Shigella flexneri 5 str. 8401, complete genomeprobable formate acetyltransferase 30842
NC_010498:3488513:3490352349035234926462295Escherichia coli SMS-3-5, complete genomeformate acetyltransferase0842
NC_004337:3249791:3251630325163032539242295Shigella flexneri 2a str. 301, complete genomeprobable formate acetyltransferase 30841
NC_004741:3240909:3242748324274832450422295Shigella flexneri 2a str. 2457T, complete genomeprobable formate acetyltransferase 30841
NC_017328:3289853:3291692329169232939862295Shigella flexneri 2002017 chromosome, complete genomeKeto-acid formate acetyltransferase0841
NC_011750:3768692:3773475377347537757692295Escherichia coli IAI39 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase0841
NC_007613:2981829:2982232298223229845262295Shigella boydii Sb227, complete genomeprobable formate acetyltransferase 30841
CU928160:3344746:3346585334658533488792295Escherichia coli IAI1 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase0840
CP002516:613462:6259516259516282452295Escherichia coli KO11, complete genomeformate acetyltransferase0840
NC_011748:3608917:3613700361370036159942295Escherichia coli 55989, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase0840
NC_009800:3307123:3308962330896233112562295Escherichia coli HS, complete genomeformate acetyltransferase0840
AC_000091:3258377:3258780325878032610742295Escherichia coli W3110 DNA, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase0840
CP002185:3475991:3477828347782834801222295Escherichia coli W, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase0840
NC_000913:3256307:3258146325814632604402295Escherichia coli K12, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase0840
NC_016605:233087:2343352343352365932259Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeformate acetyltransferase0840
NC_010473:3354052:3355891335589133581852295Escherichia coli str. K-12 substr. DH10B, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase0840
CU928145:3608917:3613700361370036159942295Escherichia coli 55989 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase0840
NC_011415:3523364:3528147352814735304412295Escherichia coli SE11 chromosome, complete genomeputative formate acetyltransferase 30840
NC_011741:3344746:3346585334658533488792295Escherichia coli IAI1 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase0840
NC_012759:3143455:3145294314529431475882295Escherichia coli BW2952 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase0840
NC_012947:630757:6450876450876473812295Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeformate acetyltransferase0840
NC_012967:3191319:3193158319315831954522295Escherichia coli B str. REL606 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase0840
NC_013941:3884725:3889508388950838918022295Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeKeto-acid formate acetyltransferase0840
NC_016902:613462:6259516259516282452295Escherichia coli KO11FL chromosome, complete genomeformate acetyltransferase0840
NC_010658:3014371:3024716302471630270102295Shigella boydii CDC 3083-94, complete genomeformate acetyltransferase0840
NC_010468:613812:6281426281426304362295Escherichia coli ATCC 8739, complete genomeformate acetyltransferase0839
NC_009801:3595001:3595001359500135972952295Escherichia coli E24377A, complete genomeformate acetyltransferase0838
NC_002695:3994970:3999753399975340020472295Escherichia coli O157:H7 str. Sakai, complete genomeputative formate acetyltransferase 30838
NC_011751:3710786:3715570371557037178642295Escherichia coli UMN026 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase0838
NC_014614:2500301:2523531252353125257742244Clostridium sticklandii, complete genomepyruvate formate lyase I0835
NC_017068:1216548:1233793123379312360242232Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative pyruvate formate-lyase0830
NC_013093:2633000:2675503267550326777612259Actinosynnema mirum DSM 43827, complete genomeformate acetyltransferase0818
NC_014933:2240000:2242892224289222451292238Bacteroides helcogenes P 36-108 chromosome, complete genomeformate acetyltransferase0703
NC_008618:1206157:1228494122849412308692376Bifidobacterium adolescentis ATCC 15703, complete genomeformate acetyltransferase0674
NC_013714:1521404:1544052154405215464272376Bifidobacterium dentium Bd1, complete genomepfl Formate acetyltransferase0666
NC_006448:1451729:1469630146963014719392310Streptococcus thermophilus LMG 18311, complete genomepyruvate formate-lyase1e-163577
NC_008527:611836:6316816316816340442364Lactococcus lactis subsp. cremoris SK11, complete genomePyruvate-formate lyase2e-160566
NC_014410:51711:7264772647748742228Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,7e-122438
NC_014363:1344768:1367739136773913701532415Olsenella uli DSM 7084 chromosome, complete genomepyruvate formate-lyase3e-37157
NC_021182:4058873:4061331406133140637512421Clostridium pasteurianum BC1, complete genomepyruvate formate-lyase5e-33143
NC_016938:193000:2130022130022154342433Melissococcus plutonius DAT561 chromosome 1, complete genomepyruvate formate-lyase1e-32142
NC_013517:2055071:2057425205742520597222298Sebaldella termitidis ATCC 33386, complete genomepyruvate formate-lyase2e-30134
NC_011134:1854868:1873022187302218754392418Streptococcus equi subsp. zooepidemicus str. MGCS10565, completepyruvate formate-lyase9e-30132
NC_008023:1707021:1728268172826817306852418Streptococcus pyogenes MGAS2096, complete genomeFormate acetyltransferase1e-29131
NC_002737:1670164:1705477170547717078942418Streptococcus pyogenes M1 GAS, complete genomeputative pyruvate formate-lyase 22e-29131
NC_014328:2872721:2875133287513328774872355Clostridium ljungdahlii ATCC 49587 chromosome, complete genomepyruvate formate-lyase2e-28127
NC_014624:2297000:2309569230956923119532385Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-27125
NC_014364:4488875:4505347450534745076892343Spirochaeta smaragdinae DSM 11293 chromosome, complete genomepyruvate formate-lyase4e-27123
NC_013364:928486:9490679490679514992433Escherichia coli O111:H- str. 11128, complete genomeputative pyruvate formate lyase4e-26120
NC_013353:922937:9447969447969472282433Escherichia coli O103:H2 str. 12009, complete genomepyruvate formate lyase4e-26120
AP010958:922937:9447969447969472282433Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted pyruvate formate lyase4e-26120
NC_009633:3933941:3949827394982739523642538Alkaliphilus metalliredigens QYMF chromosome, complete genomeformate C-acetyltransferase2e-25118
NC_012108:481657:4926674926674950332367Desulfobacterium autotrophicum HRM2, complete genomePflD13e-25117
NC_009615:919495:9222889222889247202433Parabacteroides distasonis ATCC 8503 chromosome, complete genomeformate C-acetyltransferase6e-25116
NC_009089:1283000:1316081131608113184532373Clostridium difficile 630, complete genomeglycerol dehydratase1e-22108
NC_015424:2917817:2938443293844329408782436Aeromonas veronii B565 chromosome, complete genomeformate acetyltransferase 33e-22107
NC_015573:2463123:2501489250148925039782490Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeFormate C-acetyltransferase3e-22107
NC_010723:1465097:1473488147348814760282541Clostridium botulinum E3 str. Alaska E43, complete genomeformate C-acetyltransferase2e-21105
NC_014328:4316008:4331070433107043336192550Clostridium ljungdahlii ATCC 49587 chromosome, complete genomepyruvate formate-lyase2e-21105
NC_010674:1496500:1503275150327515058152541Clostridium botulinum B str. Eklund 17B, complete genomeformate C-acetyltransferase6e-21103
NC_017297:2288000:2304809230480923073492541Clostridium botulinum F str. 230613 chromosome, complete genomeformate acetyltransferase3e-20100
NC_009699:2287893:2304693230469323072332541Clostridium botulinum F str. Langeland chromosome, complete genomeformate acetyltransferase3e-20100
NC_009698:2171151:2184335218433521868752541Clostridium botulinum A str. Hall chromosome, complete genomeformate acetyltransferase3e-20100
NC_009697:2173000:2184116218411621866562541Clostridium botulinum A str. ATCC 19397 chromosome, completeformate acetyltransferase3e-20100
NC_009495:2244774:2255474225547422580142541Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeformate acetyltransferase3e-20100
NC_012563:2384500:2398878239887824014182541Clostridium botulinum A2 str. Kyoto, complete genomeformate acetyltransferase3e-20100
NC_004557:1553000:1563237156323715657772541Clostridium tetani E88, complete genomeformate acetyltransferase 27e-2099.8
NC_016048:3856665:3869661386966138720362376Oscillibacter valericigenes Sjm18-20, complete genomepyruvate formate-lyase family protein6e-2099.8
NC_009922:2556033:2573187257318725757362550Alkaliphilus oremlandii OhILAs, complete genomeFormate C-acetyltransferase1e-1999
NC_006138:656000:6722656722656746162352Desulfotalea psychrophila LSv54, complete genomeformate C-acetyltransferase1e-1998.6
NC_012658:2295536:2312844231284423153842541Clostridium botulinum Ba4 str. 657 chromosome, complete genomeformate acetyltransferase2e-1998.2
NC_010001:1745089:1755519175551917580652547Clostridium phytofermentans ISDg, complete genomeFormate C-acetyltransferase2e-1997.8
NC_020063:3690308:3716693371669337190712379Enterobacteriaceae bacterium strain FGI 57, complete genomepyruvate-formate lyase7e-1892.8
NC_016584:5625975:5640307564030756428502544Desulfosporosinus orientis DSM 765 chromosome, complete genomepyruvate-formate lyase2e-1688.2
NC_008751:607209:6257176257176282032487Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeFormate C-acetyltransferase2e-1585.1
NC_021182:966839:9668399668399693252487Clostridium pasteurianum BC1, complete genomepyruvate-formate lyase2e-1585.1
NC_009943:1043210:1060198106019810625462349Candidatus Desulfococcus oleovorans Hxd3, complete genomeFormate C-acetyltransferase8e-1582.8
NC_010001:1488000:1489322148932214919252604Clostridium phytofermentans ISDg, complete genomepyruvate formate-lyase2e-1274.7
NC_008750:450233:4655524655524680952544Shewanella sp. W3-18-1, complete genomepyruvate formate-lyase4e-1273.9
NC_009438:212476:2279922279922305352544Shewanella putrefaciens CN-32 chromosome, complete genomepyruvate formate-lyase4e-1273.9
NC_004431:4270305:4315437431543743179892553Escherichia coli CFT073, complete genomehypothetical protein3e-1067.8
NC_014363:114239:1374171374171400532637Olsenella uli DSM 7084 chromosome, complete genomeFormate C-acetyltransferase4e-0860.5
NC_021182:4058873:4066627406662740689902364Clostridium pasteurianum BC1, complete genomepyruvate-formate lyase5e-0860.1
NC_019673:6259229:627693762769376277281345Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-0758.2