Pre_GI: BLASTP Hits

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Query: NC_010001:3421710:3440301 Clostridium phytofermentans ISDg, complete genome

Start: 3440301, End: 3440876, Length: 576

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016048:1438721:147035414703541470926573Oscillibacter valericigenes Sjm18-20, complete genomeputative N-acetylmuramoyl-L-alanine amidase9e-58222
NC_014376:1472304:152044715204471521025579Clostridium saccharolyticum WM1 chromosome, complete genomecell wall hydrolase/autolysin1e-47188
NC_015873:1241354:125163212516321252201570Megasphaera elsdenii DSM 20460, complete genomeN-acetylmuramoyl-L-alanine amidase CwlB1e-2099.4
NC_013740:1218429:125365712536571254211555Acidaminococcus fermentans DSM 20731, complete genomecell wall hydrolase/autolysin4e-2097.8
NC_015589:1630461:163505816350581635783726Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase4e-1890.9
NC_015520:3060495:306407430640743064778705Mahella australiensis 50-1 BON chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-1684.7
NC_015555:2259500:2300952230095223023821431Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeN-acetylmuramoyl-L-alanine amidase4e-1684.3
NC_019970:2551607:2572748257274825741781431Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1479.7
NC_000964:3658000:3658149365814936596391491Bacillus subtilis subsp. subtilis str. 168, complete genomeN-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49)5e-1477.4
NC_017068:1852708:187490318749031875460558Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative N-acetylmuramoyl-L-alanine amidase5e-1477.4
NC_016077:1944000:196049419604941961051558Acidaminococcus intestini RyC-MR95 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1376.3
NC_014328:180482:1848201848201866311812Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative N-acetylmuramoyl-L-alanine amidase1e-1272.8
NC_019970:439969:455935455935456609675Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD4e-1271.2
NC_007644:1293701:131535413153541316082729Moorella thermoacetica ATCC 39073, complete genomeN-acetylmuramoyl-L-alanine amidase6e-1270.5
NC_011567:139598:140106140106140804699Anoxybacillus flavithermus WK1, complete genomeN-acetylmuramoyl-L-alanine amidase2e-1168.9
NC_014220:2239594:224053722405372241220684Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD4e-1167.8
NC_014209:1910109:191010919101091910789681Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,N-acetylmuramoyl-L-alanine amidase CwlD4e-1167.8
NC_016047:2480921:248393824839382484552615Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeN-acetylmuramoyl-L-alanine amidase9e-1166.6
NC_006582:2944237:2947330294733029483461017Bacillus clausii KSM-K16, complete genomeN-acetylmuramoyl-L-alanine amidase9e-1166.6
NC_010001:4586000:459873045987304599443714Clostridium phytofermentans ISDg, complete genomecell wall hydrolase/autolysin2e-1065.9
NC_015519:2489728:250441425044142505076663Tepidanaerobacter sp. Re1 chromosome, complete genomecell wall hydrolase/autolysin2e-1065.1
NC_015520:55710:629746297463672699Mahella australiensis 50-1 BON chromosome, complete genomecell wall hydrolase/autolysin7e-1063.5
NC_014551:157418:157418157418158131714Bacillus amyloliquefaciens DSM 7, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1063.5
NC_020410:1781884:178188417818841782642759Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeSporulation-specific N-acetylmuramoyl-L-alanine amidase9e-1063.2
NC_007604:2213659:2213659221365922147081050Synechococcus elongatus PCC 7942, complete genomeCell wall hydrolase/autolysin5e-0960.8
NC_013316:120759:126866126866127618753Clostridium difficile R20291, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase6e-0960.5
NC_009089:117980:123166123166123870705Clostridium difficile 630, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase7e-0960.5
NC_009922:315870:3336633336633350961434Alkaliphilus oremlandii OhILAs, complete genomeSpoIID/LytB domain7e-0960.5
NC_016077:998741:105235210523521053323972Acidaminococcus intestini RyC-MR95 chromosome, complete genometranscriptional regulator1e-0859.7
NC_016584:233486:254592254592255323732Desulfosporosinus orientis DSM 765 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-0859.3
NC_018704:176088:179814179814180518705Amphibacillus xylanus NBRC 15112, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase2e-0859.3
NC_003901:2727361:2729681272968127310541374Methanosarcina mazei Go1, complete genomecell surface protein2e-0858.9
NC_004193:205278:209362209362210093732Oceanobacillus iheyensis HTE831, complete genomegermination specific N-acetylmuramoyl-L-alanine amidase2e-0858.9
NC_018515:3411276:341942134194213420176756Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase2e-0858.9
NC_017208:108134:149586149586150299714Bacillus thuringiensis serovar chinensis CT-43 chromosome, completespore-specific N-acetylmuramoyl-L-alanine amidase2e-0858.5
NC_014171:109280:147537147537148250714Bacillus thuringiensis BMB171 chromosome, complete genomespore-specific N-acetylmuramoyl-L-alanine amidase2e-0858.5
NC_013921:1396500:140293514029351403645711Thermoanaerobacter italicus Ab9 chromosome, complete genomecell wall hydrolase/autolysin4e-0857.8
NC_018515:4660808:466437946643794665224846Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase4e-0857.8
NC_008578:2431074:2432880243288024340161137Acidothermus cellulolyticus 11B, complete genomecell wall hydrolase/autolysin4e-0857.8
NC_010723:3133302:3141134314113431431912058Clostridium botulinum E3 str. Alaska E43, complete genomesurface protein PspC6e-0857.4
NC_010718:237962:241113241113241916804Natranaerobius thermophilus JW/NM-WN-LF, complete genomeN-acetylmuramoyl-L-alanine amidase5e-0857.4
NC_017208:4662500:467237946723794673311933Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeN-acetylmuramoyl-L-alanine amidase7e-0857
NC_013411:597235:632480632480633163684Geobacillus sp. Y412MC61, complete genomecell wall hydrolase/autolysin7e-0857
NC_014915:2963500:297077229707722971452681Geobacillus sp. Y412MC52 chromosome, complete genomecell wall hydrolase/autolysin8e-0857
NC_016627:2870900:2888618288861828896881071Clostridium clariflavum DSM 19732 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-0756.6
UCMB5137:1375622:137628713762871377051765Bacillus atrophaeus UCMB-5137N-acetylmuramoyl-L-alanine amidase1e-0756.2
NC_014328:4249032:426661242666124267328717Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-0755.1
NC_019978:686362:688393688393689076684Halobacteroides halobius DSM 5150, complete genomeN-acetylmuramoyl-L-alanine amidase2e-0755.1
NC_018664:1573925:158825715882571589231975Clostridium acidurici 9a chromosome, complete genomeputative cell wall amidase LytH2e-0755.1
NC_010723:3133302:3143492314349231457052214Clostridium botulinum E3 str. Alaska E43, complete genomesurface protein PspC3e-0754.7
NC_004722:4614442:462715946271594628094936Bacillus cereus ATCC 14579, complete genomeN-acetylmuramoyl-L-alanine amidase3e-0754.7
NC_011725:4636521:465143646514364652389954Bacillus cereus B4264 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase8e-0753.5
NC_014829:178000:178742178742179461720Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD1e-0653.1
NC_010184:4497473:451261145126114513567957Bacillus weihenstephanensis KBAB4, complete genomecell wall hydrolase/autolysin1e-0653.1
NC_015565:287900:331818331818332537720Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completecell wall hydrolase/autolysin1e-0652.8
NC_013316:1081044:1093266109326610953052040Clostridium difficile R20291, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)2e-0652.4
NC_009089:1202261:1214547121454712165862040Clostridium difficile 630, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)2e-0652.4
NC_010424:1563033:1592155159215515944102256Candidatus Desulforudis audaxviator MP104C, complete genomeN-acetylmuramoyl-L-alanine amidase3e-0651.6
NC_012926:727716:7307667307667335732808Streptococcus suis BM407 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-0651.6
NC_012563:2101449:210342221034222104180759Clostridium botulinum A2 str. Kyoto, complete genomeN-acetylmuramoyl-L-alanine amidase3e-0651.6
NC_021184:4493440:451665445166544517340687Desulfotomaculum gibsoniae DSM 7213, complete genomeN-acetylmuramoyl-L-alanine amidase4e-0651.2
NC_011772:4606000:461732146173214618274954Bacillus cereus G9842, complete genomeN-acetylmuramoyl-L-alanine amidase5e-0650.8
NC_011297:1167615:1185899118589911875631665Dictyoglomus thermophilum H-6-12, complete genomecell wall hydrolase/autolysin8e-0650.4