Pre_GI: BLASTP Hits

Some Help

Query: NC_010001:3266561:3277960 Clostridium phytofermentans ISDg, complete genome

Start: 3277960, End: 3280053, Length: 2094

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012778:841934:8492378492378513722136Eubacterium eligens ATCC 27750, complete genometwo-component system, chemotaxis family, sensor kinase CheA0816
NC_014377:1089894:1095689109568910976561968Thermosediminibacter oceani DSM 16646 chromosome, complete genomeCheA signal transduction histidine kinase3e-172605
NC_017295:2286911:2309111230911123111922082Clostridium acetobutylicum EA 2018 chromosome, complete genomeChemotaxis histidine kinase, CheA (contains CheW-like adaptor domain)4e-154545
NC_017297:2905138:2921081292108129231562076Clostridium botulinum F str. 230613 chromosome, complete genomechemotaxis protein CheA8e-151534
NC_009699:2901497:2920944292094429230192076Clostridium botulinum F str. Langeland chromosome, complete genomechemotaxis protein CheA8e-151534
NC_012658:2930244:2948839294883929509142076Clostridium botulinum Ba4 str. 657 chromosome, complete genomechemotaxis protein CheA1e-150534
NC_012563:3090954:3111354311135431134292076Clostridium botulinum A2 str. Kyoto, complete genomechemotaxis protein CheA2e-150533
NC_009495:2876865:2897265289726528993402076Clostridium botulinum A str. ATCC 3502 chromosome, complete genomechemotaxis protein CheA1e-150533
NC_009697:2790277:2810677281067728127522076Clostridium botulinum A str. ATCC 19397 chromosome, completechemotaxis protein CheA1e-150533
NC_009698:2727203:2747603274760327496782076Clostridium botulinum A str. Hall chromosome, complete genomechemotaxis protein CheA1e-150533
NC_021182:2921000:2940754294075429428172064Clostridium pasteurianum BC1, complete genomechemotaxis protein histidine kinase-like protein3e-150532
NC_010520:2937981:2956767295676729588422076Clostridium botulinum A3 str. Loch Maree, complete genomechemotaxis protein CheA5e-150531
NC_008346:983816:9927929927929948252034Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeputative CheA signal transduction histidine kinases7e-150531
NC_009617:4946000:4959847495984749619102064Clostridium beijerinckii NCIMB 8052 chromosome, complete genomechemotaxis protein CheA1e-149530
NC_014328:1046958:1053865105386510559372073Clostridium ljungdahlii ATCC 49587 chromosome, complete genomechemotaxis histidine kinase3e-147522
NC_020291:4944835:4997667499766749997302064Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomechemotaxis protein CheA4e-146519
NC_008593:1060548:1075877107587710779402064Clostridium novyi NT, complete genomechemotaxis protein cheA7e-145514
NC_009454:2201987:2222519222251922245792061Pelotomaculum thermopropionicum SI, complete genomechemotaxis protein histidine kinase and related kinases2e-140500
NC_015425:1207314:1207314120731412093292016Clostridium botulinum BKT015925 chromosome, complete genomeCheA signal transduction histidine kinase3e-138492
NC_007644:779376:7773357773357793922058Moorella thermoacetica ATCC 39073, complete genomeCheA signal transduction histidine kinases1e-133477
NC_010516:2900057:2916615291661529184861872Clostridium botulinum B1 str. Okra, complete genomechemotaxis protein CheA3e-133476
NC_015589:1240197:1240197124019712422872091Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeCheW domain-containing protein2e-132473
NC_015391:2099472:2102942210294221050142073Carnobacterium sp. 17-4 chromosome, complete genomechemotactic two-component sensor histidine kinase2e-125449
NC_013741:1144592:1170206117020611720861881Archaeoglobus profundus DSM 5631, complete genomeCheA signal transduction histidine kinase5e-118425
NC_016011:678419:6799386799386817881851Listeria ivanovii subsp. ivanovii PAM 55, complete genomeputative two-component sensor histidine kinase CheA3e-116419
NC_017167:129988:1473181473181493151998Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1CheA signal transduction histidine kinase2e-114414
NC_004557:1826977:1841710184171018441062397Clostridium tetani E88, complete genomechemotaxis protein cheA2e-114413
NC_002973:730942:7409057409057427611857Listeria monocytogenes str. 4b F2365, complete genomechemotaxis protein CheA2e-114413
NC_003210:721824:7264137264137282691857Listeria monocytogenes EGD-e, complete genometwo-component sensor histidine kinase CheA2e-114413
NC_012488:732233:7348977348977367531857Listeria monocytogenes Clip81459, complete genometwo-component sensor histidine kinase CheA2e-114413
NC_013766:757987:7639367639367657921857Listeria monocytogenes 08-5578 chromosome, complete genometwo-component sensor histidine kinase CheA2e-114413
NC_013768:721897:7306407306407324961857Listeria monocytogenes 08-5923, complete genometwo-component sensor histidine kinase CheA2e-114413
NC_003212:721112:7257007257007275561857Listeria innocua Clip11262, complete genometwo-component sensor histidine kinase CheA4e-112405
NC_020134:1941523:1951940195194019540302091Clostridium stercorarium subsp. stercorarium DSM 8532, completechemotaxis protein CheA2e-111404
NC_011832:1949717:1969671196967119716471977Candidatus Methanosphaerula palustris E1-9c, complete genomeCheA signal transduction histidine kinase2e-110400
NC_014831:2224733:2245559224555922475922034Thermaerobacter marianensis DSM 12885 chromosome, complete genomeCheA signal transduction histidine kinase3e-104379
NC_009483:5113729:5123683512368351254791797Geobacter uraniireducens Rf4 chromosome, complete genomeCheA signal transduction histidine kinase3e-101370
NC_011830:4399642:4399642439964244018312190Desulfitobacterium hafniense DCB-2, complete genomeCheA signal transduction histidine kinase3e-100366
NC_015636:1455700:1464415146441514672792865Methanothermococcus okinawensis IH1 chromosome, complete genomesignal transduction histidine kinase CheA2e-98360
NC_015682:1457004:1467321146732114698972577Thermodesulfobacterium sp. OPB45 chromosome, complete genomeCheA signal transduction histidine kinase6e-97355
NC_016012:561687:5616875616875638342148Candidatus Arthromitus sp. SFB-rat-Yit, complete genomechemotaxis protein CheA9e-95348
NC_014926:795549:8041578041578061451989Thermovibrio ammonificans HB-1 chromosome, complete genomeCheA signal transduction histidine kinase1e-94348
NC_014122:685701:6972896972897001712883Methanocaldococcus infernus ME chromosome, complete genomeCheA signal transduction histidine kinase2e-94347
NC_014844:2056943:2068787206878720718583072Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeCheW domain-containing protein5e-94345
NC_012440:659646:6957086957086976871980Persephonella marina EX-H1, complete genomechemotaxis protein CheA2e-93343
NC_020291:3900046:3915135391513539172132079Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomechemotaxis protein CheA2e-90334
NC_000868:1502276:1511436151143615137542319Pyrococcus abyssi GE5, complete genomechemotaxis histidine kinase3e-90333
NC_015474:1035834:1043246104324610455132268Pyrococcus sp. NA2 chromosome, complete genomehistidine kinase (cheA)8e-90332
NC_008011:1394777:1401396140139614036092214Lawsonia intracellularis PHE/MN1-00, complete genomeChemotaxis protein histidine kinase and related kinases2e-89330
NC_009654:3849774:3867116386711638693532238Marinomonas sp. MWYL1, complete genomeCheA signal transduction histidine kinase6e-89328
NC_000961:435489:4408134408134431132301Pyrococcus horikoshii OT3, complete genomehistidine kinase (cheA)8e-89328
NC_015680:1315040:1351722135172213540282307Pyrococcus yayanosii CH1 chromosome, complete genomechemotaxis histidine kinase1e-88327
NC_000917:940088:9462469462469482161971Archaeoglobus fulgidus DSM 4304, complete genomechemotaxis histidine kinase (cheA)1e-86321
NC_020389:1346358:1354273135427313562822010Methanosarcina mazei Tuc01, complete genomeSignal transduction histidine kinase CheA2e-86320
NC_003901:1568000:1579268157926815812832016Methanosarcina mazei Go1, complete genomechemotaxis protein2e-86320
NC_015172:1161000:1164684116468411667532070Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeCheA signal transduction histidine kinase2e-85317
NC_004129:1848701:1873175187317518754542280Pseudomonas fluorescens Pf-5, complete genomechemotaxis sensor histidine kinase CheA2e-85317
NC_009512:1691930:1713934171393417161772244Pseudomonas putida F1, complete genomeCheA signal transduction histidine kinase4e-85316
NC_017986:4374979:4396983439698343992262244Pseudomonas putida ND6 chromosome, complete genomeCheA signal transduction histidine kinase4e-85316
NC_007492:1735595:1755271175527117575352265Pseudomonas fluorescens PfO-1, complete genomeCheA Signal Transduction Histidine Kinases (STHK)5e-85315
NC_015222:1607757:1615006161500616171922187Nitrosomonas sp. AL212 chromosome, complete genomeCheA signal transduction histidine kinase2e-84314
NC_014012:207289:2150362150362171442109Shewanella violacea DSS12, complete genomechemotaxis protein CheA3e-84313
NC_007298:778723:7940337940337963872355Dechloromonas aromatica RCB, complete genomeCheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt8e-84311
NC_016026:468311:4825734825734852362664Micavibrio aeruginosavorus ARL-13 chromosome, complete genomehistidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein2e-83310
NC_009012:2706755:2718091271809127201992109Clostridium thermocellum ATCC 27405, complete genomeCheA signal transduction histidine kinases4e-83309
NC_012880:1765920:1794818179481817968632046Dickeya dadantii Ech703, complete genomeCheA signal transduction histidine kinase4e-83309
NC_012225:569590:5799695799695821312163Brachyspira hyodysenteriae WA1, complete genomechemotaxis histidine kinase CheA1e-82308
NC_017243:1698000:1708231170823117103272097Brachyspira intermedia PWS/A chromosome, complete genomechemotaxis histidine kinase CheA1e-82308
NC_009617:4805413:4817081481708148192372157Clostridium beijerinckii NCIMB 8052 chromosome, complete genomechemotaxis protein CheA1e-82308
NC_013722:1577818:1598731159873116004791749Xanthomonas albilineans, complete genomeprobable chemotaxis protein chea9e-83308
NC_019908:121178:1463181463181484292112Brachyspira pilosicoli P43/6/78 chromosome, complete genomechemotaxis histidine kinase CheA2e-82307
NC_014330:505412:5163375163375184482112Brachyspira pilosicoli 95/1000 chromosome, complete genomechemotaxis histidine kinase CheA2e-82307
NC_018604:1943561:1950154195015419522652112Brachyspira pilosicoli WesB complete genomechemotaxis histidine kinase CheA2e-82307
NC_010338:650054:6739626739626759201959Caulobacter sp. K31, complete genomeCheA signal transduction histidine kinase2e-82307
NC_018607:921923:9465989465989487092112Brachyspira pilosicoli B2904 chromosome, complete genomechemotaxis histidine kinase CheA2e-82307
NC_010688:2532929:2551634255163425532891656Xanthomonas campestris pv. campestris, complete genomechemotaxis protein5e-82306
NC_003902:2211790:2227277222727722289321656Xanthomonas campestris pv. campestris str. ATCC 33913, completechemotaxis related protein4e-82306
NC_003919:2233000:2255464225546422571221659Xanthomonas axonopodis pv. citri str. 306, complete genomechemotaxis related protein9e-82305
NC_016629:3308329:3352888335288833549992112Desulfovibrio africanus str. Walvis Bay chromosome, completeCheA signal transduction histidine kinase1e-81304
NC_007508:2234080:2248718224871822503761659Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomechemotaxis protein CheA2e-81304
NC_017267:2326443:2343797234379723454551659Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completetwo-component system sensor protein CheA3e-81303
NC_014376:3671441:3692415369241536945532139Clostridium saccharolyticum WM1 chromosome, complete genomeCheA signal transduction histidine kinase6e-81302
NC_012917:2971702:2976921297692129789302010Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeCheA signal transduction histidine kinase7e-81302
NC_013421:2004088:2017642201764220196301989Pectobacterium wasabiae WPP163, complete genomeCheA signal transduction histidine kinase7e-81302
NC_013592:1668092:1698731169873117007672037Dickeya dadantii Ech586, complete genomeCheA signal transduction histidine kinase2e-80300
NC_011126:163878:1734991734991755622064Hydrogenobaculum sp. Y04AAS1, complete genomeCheA signal transduction histidine kinase2e-80300
NC_009485:7021228:7023434702343470254792046Bradyrhizobium sp. BTAi1 chromosome, complete genomechemotaxis protein CheA5e-80299
NC_014500:3071764:3085057308505730870842028Dickeya dadantii 3937 chromosome, complete genomechemotaxis protein CheA8e-80298
NC_018012:1326553:1326553132655313288322280Thiocystis violascens DSM 198 chromosome, complete genomechemotaxis protein histidine kinase-like protein1e-79298
NC_014973:1071500:1073800107380010758602061Geobacter sp. M18 chromosome, complete genomeCheA signal transduction histidine kinase1e-79298
NC_012968:1352463:1368773136877313710822310Methylotenera mobilis JLW8, complete genomeCheA signal transduction histidine kinase2e-79297
NC_020409:329915:3462123462123484162205Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeCheA signal transduction histidine kinase3e-79296
NC_015573:1045877:1046259104625910486042346Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeputative CheA signal transduction histidine kinase5e-79296
NC_009483:2489000:2527425252742525295482124Geobacter uraniireducens Rf4 chromosome, complete genomeCheA signal transduction histidine kinase6e-79295
NC_010730:952574:9619679619679639251959Sulfurihydrogenibium sp. YO3AOP1, complete genomeCheA signal transduction histidine kinase7e-79295
NC_015497:2997275:3019536301953630216202085Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeCheA signal transduction histidine kinase1e-78294
NC_008710:703740:7102517102517128152565Borrelia turicatae 91E135, complete genomechemotaxis protein CheA4e-78293
NC_009381:2009842:2012029201202920141942166Yersinia pestis Pestoides F chromosome, complete genomechemotaxis protein CheA5e-78292
NC_019892:376000:3927953927953951192325Singulisphaera acidiphila DSM 18658 chromosome, complete genomechemotaxis protein histidine kinase-like protein7e-78292
NC_013722:1577818:1592111159211115941112001Xanthomonas albilineans, complete genomeprobable chemotaxis protein chea1e-77291
NC_010673:703816:7128297128297153992571Borrelia hermsii DAH, complete genomechemotaxis protein CheA1e-77291
NC_007298:778723:8085688085688104871920Dechloromonas aromatica RCB, complete genomeCheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt8e-78291
NC_012108:3878500:3897910389791039001202211Desulfobacterium autotrophicum HRM2, complete genomeCheA18e-78291
NC_008576:4467745:4491327449132744946413315Magnetococcus sp. MC-1, complete genomeCheA signal transduction histidine kinases6e-77289
NC_014029:2607666:2610243261024326124082166Yersinia pestis Z176003 chromosome, complete genomechemotaxis protein CheA8e-77288
NC_003143:1880000:1895739189573918979102172Yersinia pestis CO92, complete genomechemotaxis protein CheA8e-77288
NC_005810:1976000:1992021199202119941922172Yersinia pestis biovar Microtus str. 91001, complete genomechemotaxis protein CheA8e-77288
NC_017265:1715035:1732175173217517343462172Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,chemotaxis protein CheA8e-77288
NC_010159:2955562:2958394295839429605472154Yersinia pestis Angola, complete genomechemotaxis protein CheA7e-77288
NC_011146:3376816:3397711339771133998372127Geobacter bemidjiensis Bem, complete genomeCheA signal transduction histidine kinase7e-77288
NC_012660:5571500:5595561559556155976002040Pseudomonas fluorescens SBW25 chromosome, complete genomeputative chemotaxis two-component system sensor histidine kinase protein3e-76286
NC_013849:933913:9411109411109431102001Ferroglobus placidus DSM 10642 chromosome, complete genomeCheA signal transduction histidine kinase3e-76286
NC_009012:3324000:3328988332898833307961809Clostridium thermocellum ATCC 27405, complete genomeCheA signal transduction histidine kinases8e-76285
NC_012214:1117325:1117325111732511192951971Erwinia pyrifoliae Ep1/96, complete genomeChemotaxis protein5e-75283
NC_015958:2251619:2256267225626722586752409Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeputative CheA signal transduction histidine kinase3e-75283
NC_012559:2309566:2325156232515623269251770Laribacter hongkongensis HLHK9, complete genomeProbable chemotaxis protein CheA5e-75282
NC_014972:2089003:2089003208900320918762874Desulfobulbus propionicus DSM 2032 chromosome, complete genomeCheA signal transduction histidine kinase5e-74279
NC_015064:1238899:1252578125257812546832106Acidobacterium sp. MP5ACTX9 chromosome, complete genomeCheA signal transduction histidine kinase1e-73278
NC_014166:1751906:1769561176956117716122052Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeCheA signal transduction histidine kinase6e-73275
NC_012438:1211940:1235363123536312365051143Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomechemotaxis protein CheA2e-72274
NC_008710:577696:5845365845365866892154Borrelia turicatae 91E135, complete genomechemotaxis protein CheA1e-69264
NC_006370:847204:8525538525538547932241Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical chemotaxis histidine protein kinase, CheA3e-69263
NC_010673:578474:5876165876165897602145Borrelia hermsii DAH, complete genomechemotaxis protein CheA1e-67258
NC_015850:169180:1990771990772010621986Acidithiobacillus caldus SM-1 chromosome, complete genomeSignal transduction histidine kinase CheA9e-66252
NC_009049:1125681:1135122113512211371822061Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceCheA signal transduction histidine kinases2e-65251
NC_009428:1827352:1841071184107118431312061Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomeCheA signal transduction histidine kinase2e-65250
NC_014315:114151:1179431179431232315289Nitrosococcus watsoni C-113 chromosome, complete genomeCheA signal transduction histidine kinase9e-65248
NC_017030:6912830:6931531693153169332491719Corallococcus coralloides DSM 2259 chromosome, complete genomechemotaxis protein CheA1e-64248
NC_007484:130896:1332091332091384855277Nitrosococcus oceani ATCC 19707, complete genomeCheA signal transduction histidine kinase2e-64247
NC_011963:742158:7495567495567516162061Rhodobacter sphaeroides KD131 chromosome 1, complete sequencechemotaxis protein cheA6e-64246
NC_015666:1849618:1873951187395118783244374Halopiger xanaduensis SH-6 chromosome, complete genomesignal transduction histidine kinase CheA5e-60233
NC_014972:2659388:2685767268576726892103444Desulfobulbus propionicus DSM 2032 chromosome, complete genomeCheA signal transduction histidine kinase7e-59229
NC_008095:5062491:5086084508608450884172334Myxococcus xanthus DK 1622, complete genomegliding motility regulatory protein3e-58227
NC_002488:1812696:1855863185586318611305268Xylella fastidiosa 9a5c, complete genomechemotaxis-related protein kinase3e-54213
NC_008786:3323167:3366753336675333727045952Verminephrobacter eiseniae EF01-2, complete genomeCheA signal transduction histidine kinases2e-53211
NC_015672:101878:1126121126121150082397Flexistipes sinusarabici DSM 4947 chromosome, complete genomeCheA signal transduction histidine kinase4e-53209
NC_013939:148706:1671431671431694702328Deferribacter desulfuricans SSM1, complete genomehypothetical protein4e-51203
NC_020126:7285452:7282870728287072854552586Myxococcus stipitatus DSM 14675, complete genomesensor histidine kinase/response regulator3e-50200
NC_013946:879199:8932778932778960122736Meiothermus ruber DSM 1279 chromosome, complete genomeCheA signal transduction histidine kinase1e-46188
NC_004113:1026886:1048486104848610511012616Thermosynechococcus elongatus BP-1, complete genometwo-component hybrid sensor & regulator1e-43178
NC_012804:1431465:1434202143420214364332232Thermococcus gammatolerans EJ3, complete genomeChemotaxis histidine kinase (cheA)5e-43176
NC_008346:410940:4237164237164267873072Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeputative CheA signal transduction histidine kinases3e-30134
NC_011653:1463743:1464305146430514660681764Thermosipho africanus TCF52B, complete genomeCheA signal transduction histidine kinase, putative7e-27122
NC_015573:1045877:104862310486231049564942Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeHpt protein1e-21105
NC_015958:2251619:225531222553122256265954Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeHpt protein2e-1894.7
NC_008011:1394777:140056414005641401208645Lawsonia intracellularis PHE/MN1-00, complete genomeChemotaxis protein histidine kinase and related kinases1e-1792
NC_012968:2000218:2005527200552720076592133Methylotenera mobilis JLW8, complete genomeCheA signal transduction histidine kinase1e-1792
NC_012438:1211940:123454412345441235347804Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomechemotaxis protein CheA7e-1789.7
NC_015577:3735558:3752625375262537545531929Treponema azotonutricium ZAS-9 chromosome, complete genomePAS domain-containing protein5e-1687
NC_006576:456569:476472476472477407936Synechococcus elongatus PCC 6301, complete genometwo-component sensor histidine kinase2e-0861.2
NC_005090:1033746:103837810383781038686309Wolinella succinogenes DSM 1740, complete genomehypothetical protein2e-0758.5
NC_010003:903433:9225029225029237431242Petrotoga mobilis SJ95, complete genomehistidine kinase1e-0655.8