Pre_GI: BLASTP Hits

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Query: NC_010001:3266561:3276784 Clostridium phytofermentans ISDg, complete genome

Start: 3276784, End: 3277401, Length: 618

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012778:841934:851853851853852503651Eubacterium eligens ATCC 27750, complete genomechemotaxis protein CheC3e-58224
NC_008346:983816:995462995462996088627Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeCheC, inhibitor of MCP methylation5e-42170
NC_014377:1089894:109813610981361098774639Thermosediminibacter oceani DSM 16646 chromosome, complete genomeCheC, inhibitor of MCP methylation6e-39160
NC_010516:2900057:291578629157862916385600Clostridium botulinum B1 str. Okra, complete genomechemotaxis protein CheC7e-38156
NC_009699:2901497:292031929203192920918600Clostridium botulinum F str. Langeland chromosome, complete genomechemotaxis protein CheC7e-38156
NC_017297:2905138:292045629204562921055600Clostridium botulinum F str. 230613 chromosome, complete genomechemotaxis protein CheC7e-38156
NC_012563:3090954:311072931107293111328600Clostridium botulinum A2 str. Kyoto, complete genomechemotaxis protein CheC2e-37155
NC_010520:2937981:295614229561422956741600Clostridium botulinum A3 str. Loch Maree, complete genomechemotaxis protein CheC2e-37155
NC_009495:2876865:289664028966402897239600Clostridium botulinum A str. ATCC 3502 chromosome, complete genomechemotaxis protein CheC2e-37155
NC_009697:2790277:281005228100522810651600Clostridium botulinum A str. ATCC 19397 chromosome, completechemotaxis protein CheC2e-37155
NC_009698:2727203:274697827469782747577600Clostridium botulinum A str. Hall chromosome, complete genomechemotaxis protein CheC2e-37155
NC_012658:2930244:294821429482142948813600Clostridium botulinum Ba4 str. 657 chromosome, complete genomechemotaxis protein CheC2e-37155
NC_021182:2921000:294014029401402940742603Clostridium pasteurianum BC1, complete genomechemotaxis protein CheC, inhibitor of MCP methylation1e-37155
NC_015425:1207314:120935712093571209944588Clostridium botulinum BKT015925 chromosome, complete genomeCheC, inhibitor of MCP methylation1e-37155
NC_008593:1060548:107795310779531078555603Clostridium novyi NT, complete genomechemotaxis protein CheC1e-36152
NC_004557:1826977:184109818410981841703606Clostridium tetani E88, complete genomechemotaxis protein cheC1e-36152
NC_014328:1046958:105594910559491056548600Clostridium ljungdahlii ATCC 49587 chromosome, complete genomechemotaxis protein CheC7e-35147
NC_017295:2286911:230849623084962309098603Clostridium acetobutylicum EA 2018 chromosome, complete genomeChemotaxis protein CheC2e-32139
NC_021184:2238500:224703122470312247651621Desulfotomaculum gibsoniae DSM 7213, complete genomechemotaxis protein CheC, inhibitor of MCP methylation1e-31136
NC_009617:4946000:495905049590504959652603Clostridium beijerinckii NCIMB 8052 chromosome, complete genomechemotaxis protein CheC2e-29129
NC_011653:1728000:174618717461871746804618Thermosipho africanus TCF52B, complete genomeCheY-P phosphatase CheC1e-28126
NC_020291:4944835:499691149969114997513603Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomechEC CheY-P phosphatase CheC6e-28123
NC_015707:705628:705628705628706236609Thermotoga thermarum DSM 5069 chromosome, complete genomeMCP methylation inhibitor CheC3e-25115
NC_017095:166896:190397190397191011615Fervidobacterium pennivorans DSM 9078 chromosome, complete genomechemotaxis protein CheC, inhibitor of MCP methylation6e-25114
NC_015391:2099472:210235621023562102931576Carnobacterium sp. 17-4 chromosome, complete genomesignal terminating phosphatase of CheR-mediated methylation of methyl-accepting chemotaxis proteins (MCPs)6e-24110
NC_016012:561687:563854563854564459606Candidatus Arthromitus sp. SFB-rat-Yit, complete genomechemotaxis protein CheC4e-21101
NC_020389:1346358:135246813524681353118651Methanosarcina mazei Tuc01, complete genomeChemotaxis protein CheC1e-1996.3
NC_003901:1568000:157746315774631578101639Methanosarcina mazei Go1, complete genomechemotaxis protein1e-1995.9
NC_011832:1949717:196904219690421969656615Candidatus Methanosphaerula palustris E1-9c, complete genomeCheC, inhibitor of MCP methylation2e-1995.5
NC_000961:435489:443097443097443735639Pyrococcus horikoshii OT3, complete genomehypothetical protein2e-1995.1
NC_015680:1315040:135402113540211354650630Pyrococcus yayanosii CH1 chromosome, complete genomecheC-2 chemotaxis protein cheC1e-1893.2
NC_015474:1035834:104550610455061046135630Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein1e-1789.4
NC_013849:933913:940497940497941105609Ferroglobus placidus DSM 10642 chromosome, complete genomeCheC, inhibitor of MCP methylation5e-1684.3
NC_000868:1502276:151081415108141511458645Pyrococcus abyssi GE5, complete genomechea histidine kinase related protein6e-1684
NC_000917:940088:945645945645946262618Archaeoglobus fulgidus DSM 4304, complete genomehypothetical protein6e-1684
NC_013741:1144592:116960511696051170201597Archaeoglobus profundus DSM 5631, complete genomeCheC, inhibitor of MCP methylation3e-1581.6
NC_014652:628435:6479166479166490461131Caldicellulosiruptor hydrothermalis 108 chromosome, completechec, inhibitor of mcp methylation / flin fusion protein8e-1477
NC_007796:1291671:129603712960371296693657Methanospirillum hungatei JF-1, complete genomeCheC, inhibitor of MCP methylation1e-1376.3
NC_019892:376000:395178395178395810633Singulisphaera acidiphila DSM 18658 chromosome, complete genomechemotaxis protein CheC, inhibitor of MCP methylation3e-1271.6
NC_003212:721112:7323047323047338451542Listeria innocua Clip11262, complete genomeflagellar motor switch protein3e-1065.5
NC_003210:721824:7330177330177345641548Listeria monocytogenes EGD-e, complete genomeflagellar motor switch protein3e-1065.5
NC_013766:757987:7705407705407720871548Listeria monocytogenes 08-5578 chromosome, complete genomeflagellar motor switch protein3e-1065.5
NC_013768:721897:7372447372447387911548Listeria monocytogenes 08-5923, complete genomeflagellar motor switch protein3e-1065.5
NC_009012:574145:5920165920165932361221Clostridium thermocellum ATCC 27405, complete genomeCheC, inhibitor of MCP methylation3e-1065.1
NC_016011:678419:6865176865176880251509Listeria ivanovii subsp. ivanovii PAM 55, complete genomeputative flagellar motor switch protein FliY3e-1065.1
NC_013891:640784:6417796417796432871509Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeflagellar motor switch domain protein3e-1065.1
NC_011660:1889504:1910686191068619122331548Listeria monocytogenes HCC23 chromosome, complete genomeflagellar motor switch protein3e-1065.1
NC_012488:732233:7415017415017430481548Listeria monocytogenes Clip81459, complete genomeflagellar motor switch protein3e-1065.1
NC_008555:696217:6972126972126987501539Listeria welshimeri serovar 6b str. SLCC5334, complete genomeflagellar motor switch domain protein4e-1064.7
NC_002973:730942:7475427475427490561515Listeria monocytogenes str. 4b F2365, complete genomeflagellar motor switch protein8e-1063.5
NC_015680:1315040:135464713546471355258612Pyrococcus yayanosii CH1 chromosome, complete genomechemotaxis protein cheC3e-0961.6
NC_009633:2725128:2725128272512827263091182Alkaliphilus metalliredigens QYMF chromosome, complete genomeflagellar motor switch protein6e-0960.8
NC_015474:1035834:104613210461321046758627Pyrococcus sp. NA2 chromosome, complete genomechea histidine kinase7e-0960.5
NC_010723:801215:8012158012158023661152Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar motor switch protein FliN7e-0960.5
NC_000868:1502276:151017915101791510817639Pyrococcus abyssi GE5, complete genomechea histidine kinase9e-0960.1
NC_013202:2042776:206650120665012067094594Halomicrobium mukohataei DSM 12286, complete genomeCheC, inhibitor of MCP methylation5e-0857.8
NC_015425:1207314:1211758121175812130111254Clostridium botulinum BKT015925 chromosome, complete genomeflagellar motor switch protein FliN5e-0857.8
NC_000961:435489:443732443732444367636Pyrococcus horikoshii OT3, complete genomehypothetical protein8e-0857
NC_008593:1060548:1080379108037910815691191Clostridium novyi NT, complete genomeflagellar switch protein FliY, contains CheC-like domain8e-0857
NC_015391:2099472:2099472209947221005511080Carnobacterium sp. 17-4 chromosome, complete genomeflagellar motor switching and energizing phosphatase2e-0755.8
NC_010337:1999405:201832320183232018958636Heliobacterium modesticaldum Ice1, complete genomechec-like family protein3e-0755.1
NC_016012:561687:5662645662645673401077Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeflagellar motor switch protein6e-0754.3
NC_014614:2500301:251632125163212516941621Clostridium sticklandii, complete genomeCheC, inhibitor of MCP methylation2e-0652.8
NC_018664:1663324:1671062167106216722071146Clostridium acidurici 9a chromosome, complete genomeflagellar motor switch phosphatase FliY2e-0652.4
NC_009617:4946000:4955939495593949571351197Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar motor switch protein2e-0652.4
NC_016894:2931213:2937868293786829390011134Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar motor switch protein FliN3e-0652
NC_017295:2286911:2305431230543123066181188Clostridium acetobutylicum EA 2018 chromosome, complete genomeflagellar motor switch protein3e-0651.6
NC_015913:624859:6266526266526277281077Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeflagellar motor switch phosphatase FliY4e-0651.6