Pre_GI: BLASTP Hits

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Query: NC_010001:3266561:3275119 Clostridium phytofermentans ISDg, complete genome

Start: 3275119, End: 3275883, Length: 765

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012778:841934:853378853378854136759Eubacterium eligens ATCC 27750, complete genomephosphatidylserine decarboxylase3e-85314
NC_017268:775000:777138777138777926789Treponema pallidum subsp. pallidum str. Chicago chromosome,RNA polymerase sigma factor WhiG3e-52205
NC_021508:775264:777368777368778156789Treponema pallidum subsp. pallidum SS14, complete genomeDNA-directed RNA polymerase sigma subunit WhiG3e-52205
NC_000919:773784:775888775888776676789Treponema pallidum subsp. pallidum str. Nichols, complete genomesigma factor WhiG3e-52205
NC_010741:775000:777336777336778124789Treponema pallidum subsp. pallidum SS14, complete genomeRNA polymerase sigma-28 factor3e-52205
NC_015714:768500:770767770767771555789Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeDNA-directed RNA polymerase sigma subunit WhiG3e-52205
NC_016842:775368:777472777472778260789Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeDNA-directed RNA polymerase sigma subunit WhiG3e-52205
NC_016843:775371:777659777659778447789Treponema pallidum subsp. pertenue str. Gauthier chromosome,DNA-directed RNA polymerase sigma subunit WhiG3e-52205
NC_016848:775822:777926777926778714789Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeDNA-directed RNA polymerase sigma subunit WhiG3e-52205
NC_016844:775334:777826777826778614789Treponema pallidum subsp. pallidum DAL-1 chromosome, completeDNA-directed RNA polymerase sigma subunit WhiG3e-52205
NC_010572:2216309:221630922163092217145837Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative RNA polymerase sigma factor WhiG1e-51203
NC_021177:6127431:614515861451586145994837Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase sigma factor WhiG4e-51201
NC_008346:983816:996574996574997356783Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeputative RNA polymerase sigma factor8e-51200
NC_003888:6103534:612104361210436121885843Streptomyces coelicolor A3(2), complete genomesigma factor WhiG2e-50199
NC_014150:233194:241288241288242106819Brachyspira murdochii DSM 12563 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG6e-50197
NC_012225:377441:389172389172389999828Brachyspira hyodysenteriae WA1, complete genomeRNA polymerase sigma factor WhiG9e-50196
NC_018604:1329228:133817613381761338988813Brachyspira pilosicoli WesB complete genomeRNA polymerase sigma factor2e-49196
NC_014330:2409559:242009924200992420911813Brachyspira pilosicoli 95/1000 chromosome, complete genomeRNA polymerase sigma factor2e-49196
NC_019908:852230:859282859282860094813Brachyspira pilosicoli P43/6/78 chromosome, complete genomeRNA polymerase sigma factor WhiG2e-49196
NC_018607:1134900:114385311438531144665813Brachyspira pilosicoli B2904 chromosome, complete genomeRNA polymerase sigma factor2e-49196
NC_017243:1499757:151441615144161515243828Brachyspira intermedia PWS/A chromosome, complete genomeRNA polymerase sigma factor WhiG2e-49195
NC_014377:1089894:109924110992411099978738Thermosediminibacter oceani DSM 16646 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily4e-47188
NC_021184:2238500:225056522505652251368804Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, FliA/WhiG family2e-41169
NC_014328:1135854:115073211507321151457726Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeRNA polymerase sigma factor for flagellar operon FliA7e-41167
NC_007298:778723:816228816228816974747Dechloromonas aromatica RCB, complete genomeSigma-70 region 42e-40166
NC_015224:2017781:203906520390652039787723Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,flagellar biosynthesis sigma factor1e-40166
NC_008800:2695977:271399427139942714716723Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagellar biosynthesis sigma factor1e-40166
NC_017986:4374979:439493843949384395678741Pseudomonas putida ND6 chromosome, complete genomeflagellar biosynthesis sigma factor4e-40164
NC_002947:4931476:493147649314764932216741Pseudomonas putida KT2440, complete genomeflagellar biosynthesis sigma factor FliA4e-40164
NC_009512:1691930:171188917118891712629741Pseudomonas putida F1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG4e-40164
NC_009654:3849774:387059938705993871336738Marinomonas sp. MWYL1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG5e-40164
NC_010501:4080937:408141640814164082156741Pseudomonas putida W619, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG1e-39163
NC_007492:1735595:175314617531461753886741Pseudomonas fluorescens PfO-1, complete genomeflagellar biosynthesis sigma factor FliA2e-39162
NC_016514:2950860:295907129590712959790720Enterobacter cloacae EcWSU1 chromosome, complete genomeRNA polymerase sigma factor for flagellar operon2e-39162
NC_021182:2883716:289082828908282891553726Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, FliA/WhiG family3e-39162
NC_016894:2931213:293121329312132932046834Acetobacterium woodii DSM 1030 chromosome, complete genomeRNA polymerase, sigma 28 subunit FliA3e-39162
NC_004129:1848701:187106618710661871806741Pseudomonas fluorescens Pf-5, complete genomeflagellar biosynthesis sigma factor FliA3e-39161
NC_012779:2281700:229874322987432299465723Edwardsiella ictaluri 93-146, complete genomeRNA polymerase sigma factor for flagellar operon3e-39161
NC_016816:1912366:194426019442601944982723Pantoea ananatis LMG 5342, complete genomeRNA polymerase sigma factor for flagellar operon6e-39160
NC_013956:2523955:252451025245102525232723Pantoea ananatis LMG 20103 chromosome, complete genomeFliA6e-39160
NC_012880:1765920:184124818412481841970723Dickeya dadantii Ech703, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG9e-38157
NC_004547:1970686:198611819861181986840723Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeflagellar biosynthesis sigma factor FliA9e-38157
NC_013592:1730505:174909117490911749813723Dickeya dadantii Ech586, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily5e-38157
NC_014500:3023762:303527230352723035994723Dickeya dadantii 3937 chromosome, complete genomeRNA polymerase sigma-28 (sigma F) factor2e-37155
NC_012912:1788308:181042918104291811151723Dickeya zeae Ech1591, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG4e-37155
NC_020291:4903981:491882649188264919557732Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma factor for flagellar operon2e-36152
NC_012917:2921932:292819629281962928918723Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG6e-36150
NC_014910:4026613:404772340477234048439717Alicycliphilus denitrificans BC chromosome, complete genomeRNA polymerase sigma factor, flia/whig family8e-35147
NC_015422:4395388:441599244159924416708717Alicycliphilus denitrificans K601 chromosome, complete genomeRNA polymerase sigma 28 subunit FliA/WhiG8e-35147
NC_010730:1724443:172492517249251725653729Sulfurihydrogenibium sp. YO3AOP1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG5e-35147
NC_019940:293476:307389307389308144756Thioflavicoccus mobilis 8321 chromosome, complete genomeFliA/WhiG family RNA polymerase sigma factor5e-35147
NC_012559:731859:747206747206747949744Laribacter hongkongensis HLHK9, complete genomeFliA11e-34146
NC_012438:159927:161195161195161917723Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeRNA polymerase sigma-D factor (Sigma-28)1e-34146
NC_020409:168916:180363180363181148786Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeRNA polymerase sigma factor for flagellar operon7e-34144
NC_007759:1356439:136476413647641365549786Syntrophus aciditrophicus SB, complete genomeRNA polymerase flagellar sigma factor3e-33142
NC_006177:3192500:320519732051973205958762Symbiobacterium thermophilum IAM 14863, complete genomeRNA polymerase sigma factor related to flagellar biosynthesis2e-33142
NC_007508:2234080:225143322514332252200768Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeRNA polymerase sigma factor for flagellar operon FliA2e-33142
NC_003919:2233000:225816622581662258933768Xanthomonas axonopodis pv. citri str. 306, complete genomeRNA polymerase sigma factor2e-33142
NC_017267:2326443:234651123465112347278768Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeRNA polymerase sigma factor2e-33142
NC_010688:2532929:255433425543342555101768Xanthomonas campestris pv. campestris, complete genomeRNA polymerase sigma factor rpoD (Sigma-70).4e-33141
NC_003902:2211790:222997722299772230744768Xanthomonas campestris pv. campestris str. ATCC 33913, completeRNA polymerase sigma factor4e-33141
NC_015222:1127675:112857711285771129293717Nitrosomonas sp. AL212 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG2e-32139
NC_017095:166896:191492191492192247756Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeRNA polymerase, sigma 28 subunit, SigD/FliA/WhiG1e-29130
NC_011126:922182:921448921448922185738Hydrogenobaculum sp. Y04AAS1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG3e-29128
NC_015557:905145:906509906509907246738Hydrogenobaculum sp. 3684 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG7e-29127
NC_015587:905255:906619906619907356738Hydrogenobaculum sp. SHO chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG7e-29127
NC_020411:905335:906699906699907436738Hydrogenobaculum sp. HO, complete genomeRNA polymerase, sigma 28 subunit, SigD/FliA/WhiG7e-29127
NC_011653:1728000:174502817450281745708681Thermosipho africanus TCF52B, complete genomeRNA polymerase sigma factor for flagellar operon9e-28124
NC_015707:705628:706734706734707471738Thermotoga thermarum DSM 5069 chromosome, complete genomeRNA polymerase, sigma 28 subunit, SigD/FliA/WhiG7e-28124
NC_009348:381752:391444391444392151708Aeromonas salmonicida subsp. salmonicida A449, complete genomeLafS2e-26119
NC_009828:600349:632038632038632748711Thermotoga lettingae TMO, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG6e-26117
NC_020911:2921925:295782329578232958542720Octadecabacter antarcticus 307, complete genomeRNA polymerase sigma factor for flagellar operon8e-25114
NC_013093:2599591:261118526111852612069885Actinosynnema mirum DSM 43827, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily3e-24112
NC_012440:659646:677627677627678256630Persephonella marina EX-H1, complete genomeRNA polymerase sigma factor for flagellar operon9e-24110
NC_013940:110340:117614117614118381768Deferribacter desulfuricans SSM1 megaplasmid pDF308, completeRNA polymerase, sigma 28 subunit, FliA/WhiG family5e-23108
NC_009664:570768:581858581858582718861Kineococcus radiotolerans SRS30216, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG2e-22106
NC_008599:1489868:149019014901901490894705Campylobacter fetus subsp. fetus 82-40, complete genomeflagellar biosynthesis sigma factor FliA1e-21103
NC_015391:2059191:207239420723942073110717Carnobacterium sp. 17-4 chromosome, complete genomeRNA polymerase sigma factor SigD2e-21102
NC_018704:347948:352252352252353040789Amphibacillus xylanus NBRC 15112, complete genomeRNA polymerase sigma-B factor3e-1892.4
NC_008578:591357:595878595878596741864Acidothermus cellulolyticus 11B, complete genomeRNA polymerase, sigma 28 subunit4e-1892
NC_016109:785819:791016791016791861846Kitasatospora setae KM-6054, complete genomeputative RNA polymerase sigma factor1e-1790.5
NC_016109:5455060:5471736547173654728181083Kitasatospora setae KM-6054, complete genomeputative RNA polymerase sigma factor2e-1789.4
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome3e-1789
NC_015312:3675148:372328137232813724171891Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeSigB/F/G subfamily RNA polymerase sigma-28 subunit4e-1788.6
NC_021177:4221309:422711342271134228033921Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase sigma factor7e-1787.8
NC_014219:567033:568900568900569706807Bacillus selenitireducens MLS10 chromosome, complete genometranscriptional regulator, LuxR family8e-1787.4
NC_013159:2913927:292880029288002929600801Saccharomonospora viridis DSM 43017, complete genomeRNA polymerase sigma factor, sigma-70 family9e-1787.4
NC_014657:914071:916231916231917052822Caldicellulosiruptor owensensis OL chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod subfamily4e-1685.5
NC_021177:4221309:422601242260124226878867Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase sigma factor9e-1684
NC_008699:1816392:181882118188211819633813Nocardioides sp. JS614, complete genomesigma-70 region 2 domain protein5e-1581.6
NC_013595:9149273:916531191653119166111801Streptosporangium roseum DSM 43021, complete genomeputative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily9e-1580.5
NC_011296:909558:9211909211909226291440Thermodesulfovibrio yellowstonii DSM 11347, complete genomeRNA polymerase sigma factor RpoD2e-1479.7
NC_012034:802453:8024538024538037061254Anaerocellum thermophilum DSM 6725, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-1479
NC_010556:2773396:279301027930102793807798Exiguobacterium sibiricum 255-15, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG family3e-1479
NC_017243:1499757:151404515140451514368324Brachyspira intermedia PWS/A chromosome, complete genomeRNA polymerase sigma factor WhiG3e-1479
NC_012673:2023297:202719120271912027991801Exiguobacterium sp. AT1b, complete genomeRNA polymerase, sigma 28 subunit, Sig B/F/G subfamily4e-1478.6
NC_010296:5002428:5008809500880950100591251Microcystis aeruginosa NIES-843, complete genomeRNA polymerase sigma factor RpoD4e-1478.6
NC_007604:1586243:161346416134641614396933Synechococcus elongatus PCC 7942, complete genomeprincipal RNA polymerase sigma factor SigA7e-1477.8
NC_006576:12230:144341443415384951Synechococcus elongatus PCC 6301, complete genomegroup2 RNA polymerase sigma factor RpoD67e-1477.8
NC_004193:375416:655820655820656611792Oceanobacillus iheyensis HTE831, complete genomesigma factor B7e-1477.8
NC_019896:3491000:351722135172213518015795Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeRNA polymerase sigma factor SigB9e-1477.4
NC_008700:312099:3187643187643216732910Shewanella amazonensis SB2B, complete genomeDNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like protein1e-1377.4
NC_009012:3421000:342571634257163426474759Clostridium thermocellum ATCC 27405, complete genomeRNA polymerase, sigma 28 subunit1e-1376.6
NC_014314:755166:7722247722247737321509Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeRNA polymerase sigma 70 subunit RpoD subfamily2e-1376.3
NC_015587:1414304:1423388142338814251241737Hydrogenobaculum sp. SHO chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-1376.3
NC_015557:1412917:1423520142352014252561737Hydrogenobaculum sp. 3684 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-1376.3
NC_000964:521975:522417522417523211795Bacillus subtilis subsp. subtilis str. 168, complete genomesigma factor B3e-1375.5
NC_014976:2735423:273726627372662738054789Bacillus subtilis BSn5 chromosome, complete genomeRNA polymerase sigma factor SigB4e-1375.1
NC_018664:1:9917991710708792Clostridium acidurici 9a chromosome, complete genomeRNA polymerase factor sigma-70 RpoD4e-1375.1
NC_009922:1:102491024911061813Alkaliphilus oremlandii OhILAs, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG family4e-1375.1
NC_007644:626992:6482906482906493751086Moorella thermoacetica ATCC 39073, complete genomesigma 38 (RpoS)4e-1375.1
NC_011126:1430608:1443052144305214447881737Hydrogenobaculum sp. Y04AAS1, complete genomeRNA polymerase, sigma 70 subunit, RpoD family5e-1374.7
NC_008054:1030994:1052095105209510532311137Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRNA polymerase sigma factor8e-1374.3
NC_008529:1042220:1070412107041210715481137Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)7e-1374.3
NC_005042:1719055:1722731172273117237501020Prochlorococcus marinus subsp. marinus str. CCMP1375, completeDNA-directed RNA polymerase sigma subunit7e-1374.3
NC_008054:1030994:1053267105326710543851119Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRNA polymerase sigma factor RpoD (Sigma-A)6e-1374.3
NC_014393:4352216:4355487435548743567701284Clostridium cellulovorans 743B chromosome, complete genomeRNA polymerase, sigma 32 subunit, RpoH8e-1373.9
NC_008529:1042220:1071584107158410727021119Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)9e-1373.9
NC_012791:2423466:242507524250752425893819Variovorax paradoxus S110 chromosome 1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily1e-1273.9
NC_016047:637778:639621639621640409789Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeRNA polymerase sigma-B factor1e-1273.6
NC_014479:509919:510693510693511481789Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeRNA polymerase sigma factor SigB1e-1273.6
NC_009523:2769154:2779011277901127802071197Roseiflexus sp. RS-1 chromosome, complete genomeRNA polymerase sigma-32 subunit RpoH2e-1273.2
NC_014551:483773:484547484547485335789Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase sigma-37 factor (sigma(B))2e-1273.2
NC_017188:461177:461951461951462739789Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA polymerase sigma factor SigB2e-1273.2
NC_017190:466236:466684466684467472789Bacillus amyloliquefaciens LL3 chromosome, complete genomeRNA polymerase sigma-37 factor (sigma(B))2e-1273.2
NC_017191:467207:467981467981468769789Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA polymerase sigma factor SigB2e-1273.2
NC_019842:484933:485381485381486169789Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,RNA polymerase sigma factor SigB2e-1273.2
NC_009725:496443:497217497217498005789Bacillus amyloliquefaciens FZB42, complete genomeSigB2e-1273.2
NC_020410:495184:495958495958496746789Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase sigma-B factor2e-1273.2
NC_007413:1405817:1426867142686714281171251Anabaena variabilis ATCC 29413, complete genomeRNA polymerase sigma-like factor2e-1272.8
NC_006582:883922:886206886206886991786Bacillus clausii KSM-K16, complete genomesigma factor B2e-1272.8
NC_016593:2370000:239025823902582391010753Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeRNA polymerase sigma-F factor3e-1272.4
NC_016048:2734563:275766727576672758377711Oscillibacter valericigenes Sjm18-20, complete genomeputative RNA polymerase sigma factor3e-1272.4
NC_009465:90000:1217341217341235451812Candidatus Vesicomyosocius okutanii HA, complete genomeDNA-directed RNA polymerase sigma-70 factor4e-1272
NC_014220:1670000:1685266168526616863511086Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily4e-1272
NC_006322:2592176:2607296260729626084171122Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sigma factor4e-1272
NC_010995:2547164:2553509255350925545161008Cellvibrio japonicus Ueda107, complete genomeRNA polymerase sigma factor RpoS6e-1271.2
NC_009091:1598044:1616615161661516176341020Prochlorococcus marinus str. MIT 9301, complete genomeType II alternative RNA polymerase sigma factor, sigma-70 family7e-1270.9
NC_015638:591964:593277593277594140864Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit9e-1270.9
NC_010673:703816:7554327554327573241893Borrelia hermsii DAH, complete genomeRNA polymerase sigma factor RpoD1e-1170.5
NC_006270:2591317:2606437260643726075581122Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sigma factor1e-1170.5
NC_008710:703740:7526687526687545601893Borrelia turicatae 91E135, complete genomeRNA polymerase sigma factor RpoD1e-1170.5
NC_019748:4129500:4144777414477741460271251Stanieria cyanosphaera PCC 7437, complete genomeRNA polymerase, sigma subunit, RpsC/SigC1e-1170.5
NC_021182:2219286:2228867222886722299881122Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, sigma-70 family1e-1170.5
NC_011071:4000620:4024096402409640259521857Stenotrophomonas maltophilia R551-3, complete genomeRNA polymerase, sigma 70 subunit, RpoD1e-1170.5
NC_015947:3991696:4005239400523940070921854Burkholderia sp. JV3 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD1e-1170.5
NC_007516:2383097:2407948240794824090811134Synechococcus sp. CC9605, complete genomepossible type II alternative RNA polymerase sigma factor9e-1270.5
NC_009614:3476000:349491834949183495778861Bacteroides vulgatus ATCC 8482 chromosome, complete genomeRNA polymerase sigma factor rpoD1e-1170.1
NC_005070:2374850:239942623994262400412987Synechococcus sp. WH 8102, complete genomeType II alternative RNA polymerase sigma factor, sigma-70 family2e-1169.7
NC_013525:1953920:1974765197476519765551791Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-1169.7
NC_009380:1663545:166747116674711668469999Salinispora tropica CNB-440 chromosome, complete genomeRNA polymerase sigma factor SigB2e-1169.7
NC_010424:531727:5317275317275328091083Candidatus Desulforudis audaxviator MP104C, complete genomeRNA polymerase, sigma 70 subunit, RpoD family2e-1169.7
NC_011244:746801:7669497669497688411893Borrelia recurrentis A1, complete genomeRNA polymerase sigma factor RpoD2e-1169.7
NC_017243:1499757:151525915152591515444186Brachyspira intermedia PWS/A chromosome, complete genomeRNA polymerase sigma factor WhiG2e-1169.7
NC_007508:4476726:4490897449089744927741878Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeRNA polymerase sigma factor2e-1169.3
NC_007086:4489153:4499598449959845014721875Xanthomonas campestris pv. campestris str. 8004, complete genomeRNA polymerase sigma factor2e-1169.3
NC_003902:4430621:4442015444201544438891875Xanthomonas campestris pv. campestris str. ATCC 33913, completeRNA polymerase sigma factor RpoD2e-1169.3
NC_007298:2689731:271902027190202719949930Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma factor2e-1169.3
NC_007645:6407370:6411603641160364135221920Hahella chejuensis KCTC 2396, complete genomeRNA polymerase sigma-70 factor RpoD3e-1168.9
NC_015496:2155816:215908021590802159943864Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-1168.9
NC_015318:249445:2540152540152554901476Hippea maritima DSM 10411 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-1168.9
NC_015167:724934:728042728042728905864Cellulophaga lytica DSM 7489 chromosome, complete genomeRpoD subfamily RNA polymerase sigma 70 subunit3e-1168.9
NC_017033:276741:2903512903512922311881Frateuria aurantia DSM 6220 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-1168.9
NC_016513:1761830:1782400178240017842501851Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDNA-directed RNA polymerase sigma subunit RpoD4e-1168.6
NC_007404:359764:363361363361364206846Thiobacillus denitrificans ATCC 25259, complete genomesigma-70 factor4e-1168.6
NC_013416:1429881:1448118144811814499681851Aggregatibacter actinomycetemcomitans D11S-1, complete genomeRNA polymerase sigma factor RpoD (Sigma-70)4e-1168.6
NC_003228:3212500:321592932159293216789861Bacteroides fragilis NCTC 9343, complete genomeputative sigma factor A4e-1168.6
NC_009138:1843998:1860878186087818633042427Herminiimonas arsenicoxydans, complete genome4e-1168.6
NC_014330:2457731:245868224586822459626945Brachyspira pilosicoli 95/1000 chromosome, complete genomeRNA polymerase sigma factor RpoD4e-1168.6
NC_015164:325212:344338344338345198861Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily4e-1168.6
NC_009482:2109270:2130734213073421318461113Synechococcus sp. RCC307 chromosome, complete genomesigma-70 family RNA polymerase sigma factor4e-1168.6
NC_009850:1011293:1014453101445310163331881Arcobacter butzleri RM4018, complete genomeRNA polymerase sigma 70 factor4e-1168.6
NC_008702:1153344:117263311726331173568936Azoarcus sp. BH72, complete genomeputative RNA polymerase sigma factor5e-1168.2
NC_005125:2811986:283022128302212830985765Gloeobacter violaceus PCC 7421, complete genomesigma factor SigF5e-1168.2
NC_018607:1185195:118614611861461187072927Brachyspira pilosicoli B2904 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit5e-1168.2
NC_018604:1385788:138578813857881386714927Brachyspira pilosicoli WesB complete genomeRNA polymerase sigma factor RpoD5e-1168.2
NC_019908:748635:781082781082782008927Brachyspira pilosicoli P43/6/78 chromosome, complete genomeRNA polymerase sigma factor RpoD5e-1168.2
NC_010723:915697:9156979156979168211125Clostridium botulinum E3 str. Alaska E43, complete genomeRNA polymerase sigma factor RpoD7e-1167.8
NC_008312:6801445:6821260682126068224141155Trichodesmium erythraeum IMS101, complete genomeRNA polymerase, sigma 28 subunit9e-1167.4
NC_000911:1284552:1301671130167113027801110Synechocystis sp. PCC 6803, complete genomeRNA polymerase sigma factor9e-1167.4
NC_017039:1283732:1300698130069813018071110Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeRNA polymerase sigma factor9e-1167.4
NC_017052:1283720:1300686130068613017951110Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeRNA polymerase sigma factor9e-1167.4
NC_017277:1283477:1300488130048813015971110Synechocystis sp. PCC 6803, complete genomeRNA polymerase sigma factor9e-1167.4
NC_012918:2758775:279005027900502791027978Geobacter sp. M21 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit9e-1167.4
NC_012121:1578190:159385115938511594621771Staphylococcus carnosus subsp. carnosus TM300, complete genomesigma factor B8e-1167.4
NC_010939:1633000:1651959165195916538181860Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeRNA polymerase sigma factor 701e-1067
NC_010278:1625695:1649248164924816511071860Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,RNA polymerase sigma factor RpoD1e-1067
NC_009053:1668500:1688201168820116900601860Actinobacillus pleuropneumoniae L20, complete genomeRNA polymerase sigma factor 701e-1067
NC_010003:795355:8370528370528382961245Petrotoga mobilis SJ95, complete genomeRNA polymerase, sigma 70 subunit, RpoD family1e-1067
NC_014484:1163576:1170458117045811722001743Spirochaeta thermophila DSM 6192 chromosome, complete genomeRNA polymerase sigma factor1e-1067
NC_009454:1246393:126549412654941266273780Pelotomaculum thermopropionicum SI, complete genomeDNA-directed RNA polymerase specialized sigma subunit1e-1067
NC_003366:2286083:2298082229808222992031122Clostridium perfringens str. 13, complete genomeRNA polymerase sigma factor2e-1066.6
NC_008262:2169262:2181235218123521823351101Clostridium perfringens SM101, complete genomeRNA polymerase sigma factor RpoD2e-1066.6
NC_015589:3085442:308799830879983088780783Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRNA polymerase sigma-F factor2e-1066.2
NC_019970:1991944:1999871199987120009441074Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRNA polymerase, sigma 70 subunit, RpoD2e-1066.2
NC_015555:863173:8722008722008732731074Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-1066.2
NC_014614:6115:116041160412425822Clostridium sticklandii, complete genomeRNA polymerase sigma-37 factor (sigma-B)2e-1066.2
NC_013894:1380564:140102114010211401953933Thermocrinis albus DSM 14484 chromosome, complete genomeputative RNA polymerase, sigma 70 family subunit2e-1066.2
NC_014962:4479989:449534144953414496174834Isosphaera pallida ATCC 43644 chromosome, complete genomeRNA polymerase sigma-38 subunit RpoS2e-1066.2
NC_014393:1782811:1798057179805717991481092Clostridium cellulovorans 743B chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-1066.2
NC_013715:767722:7816667816667830481383Rothia mucilaginosa DY-18, complete genomeDNA-directed RNA polymerase, sigma subunit2e-1065.9
NC_013510:1849751:1870803187080318724821680Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-1065.9
NC_009932:39348:5824858248595191272Acaryochloris marina MBIC11017 plasmid pREB7, complete sequenceRNA polymerase sigma-24 subunit3e-1065.9
NC_003155:883500:890067890067890906840Streptomyces avermitilis MA-4680, complete genomeRNA polymerase sigma factor3e-1065.9
NC_013517:3082279:3083339308333930845021164Sebaldella termitidis ATCC 33386, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-1065.5
NC_008268:1748635:1757720175772017592821563Rhodococcus sp. RHA1, complete genomesigma factor, sigma 70 type, probable group 23e-1065.5
NC_015379:6226661:6226661622666162285081848Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,RNA polymerase sigma factor (sigma-70)3e-1065.5
NC_015957:8677395:8696862869686286981061245Streptomyces violaceusniger Tu 4113 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit5e-1065.1
NC_007005:5500196:5502219550221955040691851Pseudomonas syringae pv. syringae B728a, complete genomeRNA polymerase sigma factor5e-1065.1
NC_009434:796878:8138468138468155551710Pseudomonas stutzeri A1501, complete genomeRNA polymerase sigma factor RpoD4e-1065.1
NC_004578:568236:5888465888465906961851Pseudomonas syringae pv. tomato str. DC3000, complete genomeRNA polymerase sigma factor4e-1065.1
NC_018665:2563375:258281625828162583421606Exiguobacterium antarcticum B7 chromosome, complete genomeRNA polymerase sigma factor4e-1065.1
NC_014623:7331860:7336519733651973386392121Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRNA polymerase sigma factor rpod4e-1065.1
NC_015733:443122:4575524575524594021851Pseudomonas putida S16 chromosome, complete genomeRNA polymerase sigma factor RpoD4e-1065.1
NC_009512:469000:4860034860034878531851Pseudomonas putida F1, complete genomeRNA polymerase, sigma 70 subunit, RpoD4e-1065.1
NC_013171:1194500:1219236121923612210441809Anaerococcus prevotii DSM 20548, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily6e-1064.7
NC_013510:2782240:2799999279999928013331335Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily6e-1064.7
NC_014618:690056:7265327265327283761845Enterobacter cloacae SCF1 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD6e-1064.7
NC_009439:4404942:4404942440494244067891848Pseudomonas mendocina ymp, complete genomeRNA polymerase sigma factor RpoD6e-1064.7
NC_015672:2236000:225557622555762256508933Flexistipes sinusarabici DSM 4947 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit6e-1064.7
NC_012751:1538500:1553846155384615548531008Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeRNA polymerase, sigma S (sigma 38) factor5e-1064.7
NC_014761:1321187:1321187132118713226411455Oceanithermus profundus DSM 14977 chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod subfamily8e-1064.3
NC_015663:770485:7723817723817742251845Enterobacter aerogenes KCTC 2190 chromosome, complete genomeRNA polymerase sigma factor RpoD8e-1064.3
NC_020911:349610:353922353922354782861Octadecabacter antarcticus 307, complete genomeRNA polymerase sigma 32 factor RpoH7e-1064.3
NC_004578:1719849:1727080172708017280871008Pseudomonas syringae pv. tomato str. DC3000, complete genomeRNA polymerase sigma factor7e-1064.3
NC_017160:676249:6950996950996961571059Yersinia pestis D182038 chromosome, complete genomeRNA polymerase sigma factor RpoD7e-1064.3
NC_008463:632869:6471916471916490441854Pseudomonas aeruginosa UCBPP-PA14, complete genomesigma factor RpoD7e-1064.3
NC_014377:1227850:123522212352221235947726Thermosediminibacter oceani DSM 16646 chromosome, complete genomeRNA polymerase, sigma subunit, RpoX/SigF7e-1064.3
NC_008149:587689:6087836087836106211839Yersinia pestis Nepal516, complete genomeRNA polymerase sigma factor RpoD1e-0963.9
NC_009708:633054:6495746495746514121839Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRNA polymerase sigma factor RpoD1e-0963.9
NC_014029:729675:7507627507627526001839Yersinia pestis Z176003 chromosome, complete genomeRNA polymerase sigma factor RpoD1e-0963.9
NC_017154:671816:6929146929146947521839Yersinia pestis D106004 chromosome, complete genomeRNA polymerase sigma factor RpoD1e-0963.9
NC_016816:674171:6861796861796880231845Pantoea ananatis LMG 5342, complete genomeRNA polymerase sigma factor RpoD1e-0963.9
NC_015224:3892972:3894878389487838967161839Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,RNA polymerase sigma factor RpoD1e-0963.9
NC_013192:1993718:1993718199371819948961179Leptotrichia buccalis DSM 1135, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-0963.9
NC_017195:2273216:229212822921282292895768Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeRNA polymerase sigma-F factor9e-1063.9
NC_016785:1357500:139661513966151397604990Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeRNA polymerase sigma factor B1e-0963.5
NC_016782:1385800:141846314184631419452990Corynebacterium diphtheriae 241 chromosome, complete genomeRNA polymerase sigma factor B1e-0963.5
NC_002935:1378566:143012114301211431110990Corynebacterium diphtheriae NCTC 13129, complete genomeRNA polymerase sigma factor1e-0963.5
NC_016510:871000:877846877846878709864Flavobacterium columnare ATCC 49512 chromosome, complete genomeRpoD family RNA polymerase sigma factor1e-0963.5
NC_016789:1432000:146396714639671464956990Corynebacterium diphtheriae PW8 chromosome, complete genomeRNA polymerase sigma factor B1e-0963.5
NC_016783:1397975:143905514390551440044990Corynebacterium diphtheriae INCA 402 chromosome, complete genomeRNA polymerase sigma factor B1e-0963.5
NC_014538:1311500:133260513326051333345741Thermoanaerobacter sp. X513 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily1e-0963.5
NC_016786:1359064:141872814187281419717990Corynebacterium diphtheriae HC01 chromosome, complete genomeRNA polymerase sigma factor B1e-0963.5
NC_016787:1350676:141004114100411411030990Corynebacterium diphtheriae HC03 chromosome, complete genomeRNA polymerase sigma factor B1e-0963.5
NC_016788:1376000:141350614135061414495990Corynebacterium diphtheriae HC04 chromosome, complete genomeRNA polymerase sigma factor B1e-0963.5
NC_008800:4013298:4019198401919840210361839Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,RNA polymerase sigma factor RpoD1e-0963.5
NC_014837:3739408:3746389374638937482331845Pantoea sp. At-9b chromosome, complete genomeRNA polymerase,sigma 70 subunit,RpoD1e-0963.5
NC_009727:357206:3772503772503793462097Coxiella burnetii Dugway 7E9-12, complete genomeRNA polymerase sigma factor RpoD1e-0963.5
NC_016802:1317365:140325414032541404243990Corynebacterium diphtheriae HC02 chromosome, complete genomeRNA polymerase sigma factor B1e-0963.5
NC_016801:1422500:146025714602571461246990Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeRNA polymerase sigma factor B1e-0963.5
NC_016800:1411000:144660414466041447593990Corynebacterium diphtheriae BH8 chromosome, complete genomeRNA polymerase sigma factor B1e-0963.5
NC_016790:1345638:138610813861081387097990Corynebacterium diphtheriae VA01 chromosome, complete genomeRNA polymerase sigma factor B1e-0963.5
NC_002971:1523065:1541273154127315433692097Coxiella burnetii RSA 493, complete genomeRNA polymerase sigma factor RpoD1e-0963.2
NC_009831:1539159:154015015401501541121972Shewanella sediminis HAW-EB3, complete genomeRNA polymerase, sigma 70 subunit, RpoD family2e-0963.2
NC_008820:2595500:2614605261460526157351131Prochlorococcus marinus str. MIT 9303, complete genomePutative type II alternative RNA polymerase sigma factor3e-0962.8
NC_014355:399938:4011424011424024011260Candidatus Nitrospira defluvii, complete genomeRNA polymerase sigma-70 factor2e-0962.8
NC_016781:1297782:1320469132046913220221554Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeRNA polymerase sigma factor rpoD2e-0962.8
NC_017303:1297793:1320477132047713220301554Corynebacterium pseudotuberculosis I19 chromosome, complete genomeRNA polymerase sigma factor rpoD2e-0962.8
NC_016789:1432000:1456893145689314584461554Corynebacterium diphtheriae PW8 chromosome, complete genomeRNA polymerase sigma factor A2e-0962.8
NC_016787:1350676:1402928140292814045201593Corynebacterium diphtheriae HC03 chromosome, complete genomeRNA polymerase sigma factor A3e-0962.4
NC_009831:1255995:1273107127310712749451839Shewanella sediminis HAW-EB3, complete genomeRNA polymerase, sigma 70 subunit, RpoD family3e-0962.4
NC_016802:1317365:1396152139615213977321581Corynebacterium diphtheriae HC02 chromosome, complete genomeRNA polymerase sigma factor A3e-0962.4
NC_016801:1422500:1453156145315614547361581Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeRNA polymerase sigma factor A3e-0962.4
NC_016799:1439000:1463172146317214647521581Corynebacterium diphtheriae 31A chromosome, complete genomeRNA polymerase sigma factor A3e-0962.4
NC_016786:1359064:1411626141162614132061581Corynebacterium diphtheriae HC01 chromosome, complete genomeRNA polymerase sigma factor A3e-0962.4
NC_016785:1357500:1389513138951313910931581Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeRNA polymerase sigma factor A3e-0962.4
NC_016783:1397975:1431953143195314335331581Corynebacterium diphtheriae INCA 402 chromosome, complete genomeRNA polymerase sigma factor A3e-0962.4
NC_016782:1385800:1411361141136114129411581Corynebacterium diphtheriae 241 chromosome, complete genomeRNA polymerase sigma factor A3e-0962.4
NC_019908:2496149:250468525046852505539855Brachyspira pilosicoli P43/6/78 chromosome, complete genomeDNA directed RNA polymerase sigma subunit3e-0962.4
NC_014330:697429:713067713067713921855Brachyspira pilosicoli 95/1000 chromosome, complete genomeDNA directed RNA polymerase sigma subunit3e-0962.4
NC_016790:1345638:1379067137906713805871521Corynebacterium diphtheriae VA01 chromosome, complete genomeRNA polymerase sigma factor A3e-0962.4
NC_016788:1376000:1406465140646514079851521Corynebacterium diphtheriae HC04 chromosome, complete genomeRNA polymerase sigma factor A3e-0962.4
NC_012668:62500:6800568005699331929Vibrio cholerae MJ-1236 chromosome 1, complete sequenceRNA polymerase sigma factor RpoD3e-0962.4
NC_011898:426951:452033452033452782750Clostridium cellulolyticum H10, complete genomeRNA polymerase, sigma 28 subunit, Sig B/F/G subfamily3e-0962.4
NC_002935:1378566:1423091142309114245991509Corynebacterium diphtheriae NCTC 13129, complete genomeRNA polymerase sigma factor3e-0962.4
NC_016445:2938887:2961443296144329633201878Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeRNA polymerase primary sigma factor3e-0962.4
NC_002505:514732:5504075504075522841878Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeRNA polymerase sigma factor3e-0962.4
NC_016629:3396500:3420075342007534218591785Desulfovibrio africanus str. Walvis Bay chromosome, completeRpoD subfamily RNA polymerase sigma-70 subunit3e-0962.4
NC_016602:3122700:3127558312755831294441887Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceRNA polymerase sigma factor RpoD3e-0962.4
NC_004545:15650:5831358313601421830Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeRNA polymerase sigma factor RpoD4e-0962
NC_016800:1411000:1439503143950314410831581Corynebacterium diphtheriae BH8 chromosome, complete genomeRNA polymerase sigma factor A4e-0962
NC_009952:2381601:2381601238160123835951995Dinoroseobacter shibae DFL 12, complete genomeRNA polymerase sigma factor5e-0961.6
NC_007912:909112:9259819259819278221842Saccharophagus degradans 2-40, complete genomeputative transcriptional regulator, Fis family5e-0961.6
NC_016781:1327516:132751613275161328505990Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeRNA polymerase sigma factor sigB5e-0961.6
NC_016932:1309644:131240113124011313390990Corynebacterium pseudotuberculosis 316 chromosome, complete genomeRNA polymerase sigma factor sigB5e-0961.6
NC_009930:4909:293182931830124807Acaryochloris marina MBIC11017 plasmid pREB5, complete sequenceRNA polymerase sigma-70 factor5e-0961.6
NC_011661:1332309:1332309133230913335501242Dictyoglomus turgidum DSM 6724, complete genomeputative RNA polymerase, sigma 70 family subunit5e-0961.6
NC_008260:2340824:2350147235014723520481902Alcanivorax borkumensis SK2, complete genomeRNA polymerase sigma factor RpoD5e-0961.6
NC_015138:5046921:5053585505358550562212637Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeRpoD subfamily RNA polymerase sigma-70 subunit5e-0961.6
NC_018677:111500:1414281414281431641737Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeRNA polymerase sigma factor RpoD6e-0961.2
NC_014220:837926:842737842737843507771Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily6e-0961.2
NC_013510:3065000:3081198308119830822801083Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily7e-0961.2
NC_009380:1663545:1684802168480216864301629Salinispora tropica CNB-440 chromosome, complete genomeRNA polymerase sigma factor8e-0960.8
NC_009089:1:9857985710630774Clostridium difficile 630, complete genomeRNA polymerase sigma-B factor1e-0860.1
NC_013316:1:9857985710630774Clostridium difficile R20291, complete genomeRNA polymerase sigma-B factor1e-0860.1
NC_011761:2067695:2080861208086120827351875Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeRNA polymerase sigma factor RpoD2e-0859.7
NC_013961:851044:852228852228853220993Erwinia amylovora, complete genomeRNA polymerase sigma factor rpoS2e-0859.3
NC_010694:2971170:299977329997733000765993Erwinia tasmaniensis, complete genomeRNA polymerase sigma factor RpoS2e-0859.3
NC_009921:5202607:5225702522570252269041203Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma 70 subunit, RpoD family3e-0858.9
NC_014562:2563466:260248826024882603480993Pantoea vagans C9-1 chromosome, complete genomeRNA polymerase sigma factor rpoD3e-0858.9
NC_016626:1669477:1686194168619416881401947Burkholderia sp. YI23 plasmid byi_1p, complete sequenceRNA polymerase sigma-70 subunit RpoD3e-0858.9
NC_016818:749673:750744750744751730987Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRNA polymerase sigma factor RpoS3e-0858.9
NC_015713:2453409:2453409245340924550731665Simkania negevensis Z chromosome gsn.131, complete genomerNA polymerase sigma factor rpoD3e-0858.9
NC_007509:644000:6590416590416610742034Burkholderia sp. 383 chromosome 3, complete sequencesigma 70 (RpoD)4e-0858.5
NC_014118:2316000:2320588232058823225851998Burkholderia sp. CCGE1002 chromosome chromosome 2, completeRNA polymerase, sigma 70 subunit, RpoD4e-0858.5
NC_014448:487381:5041035041035056771575Mycoplasma hyorhinis HUB-1 chromosome, complete genomeRNA polymerase sigma factor7e-0857.8
NC_007517:1561466:158865115886511589631981Geobacter metallireducens GS-15, complete genomesigma 28 (Flagella/Sporulation)1e-0757.4
NC_010125:2295500:231102723110272312004978Gluconacetobacter diazotrophicus PAl 5, complete genomeputative RNA polymerase sigma-32 factor1e-0757
NC_011365:502620:519355519355520242888Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeRNA polymerase factor sigma-321e-0757
NC_009929:3923:2255322553238751323Acaryochloris marina MBIC11017 plasmid pREB4, complete sequenceRNA polymerase sigma factor1e-0757
NC_011662:1160887:116325211632521164103852Thauera sp. MZ1T, complete genomeRNA polymerase, sigma 32 subunit, RpoH1e-0756.6
NC_009929:58465:800918009180900810Acaryochloris marina MBIC11017 plasmid pREB4, complete sequenceRNA polymerase sigma-70 factor, putative1e-0756.6
NC_012918:1814000:1815755181575518167561002Geobacter sp. M21 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit2e-0756.2
NC_012563:2680246:269292326929232693474552Clostridium botulinum A2 str. Kyoto, complete genomeRNA polymerase sigma factor, sigma-70 family2e-0756.2
NC_017249:2073558:207916620791662080077912Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-0755.8
NC_013515:550464:5673445673445684831140Streptobacillus moniliformis DSM 12112, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-0755.8
NC_013595:3388000:338860033886003389376777Streptosporangium roseum DSM 43021, complete genomeputative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily3e-0755.5
NC_014311:1:77257725104482724Ralstonia solanacearum PSI07 chromosome, complete genomeRNA polymerase sigma factor5e-0755.1
NC_014932:1387818:138931913893191390230912Bartonella clarridgeiae 73, complete genomeRNA polymerase sigma-32 factor5e-0755.1
NC_007498:1666242:1677244167724416782871044Pelobacter carbinolicus DSM 2380, complete genomeDNA-directed RNA polymerase, sigma 70/sigma 32 subunit6e-0754.7
NC_020291:1389114:139335713933571394130774Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma-G factor SigG6e-0754.7
NC_010814:155834:170098170098170940843Geobacter lovleyi SZ, complete genomeputative RNA polymerase, sigma 70 family subunit1e-0653.9
NC_017511:602000:6167016167016186291929Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeRNA polymerase sigma factor RpoD2e-0653.1
NC_017518:1610803:1612761161276116146891929Neisseria meningitidis NZ-05/33 chromosome, complete genomeRNA polymerase sigma factor rpoD2e-0653.1
NC_009952:2752500:277254127725412773437897Dinoroseobacter shibae DFL 12, complete genomeRNA polymerase2e-0653.1
NC_013016:1441424:1443383144338314453111929Neisseria meningitidis alpha14 chromosome, complete genomeRNA polymerase sigma factor RpoD2e-0653.1
NC_008710:819389:820347820347821150804Borrelia turicatae 91E135, complete genomeRNA polymerase sigma factor RpoS2e-0652.8
NC_005125:182701:1947391947391958091071Gloeobacter violaceus PCC 7421, complete genomegroup 2 sigma 70-type sigma factor2e-0652.8
NC_007410:112074:126026126026126970945Anabaena variabilis ATCC 29413 plasmid A, complete sequenceSigma-702e-0652.8
NC_010371:57683:738267382674692867Finegoldia magna ATCC 29328 plasmid pFMC, complete sequenceRNA polymerase sigma factor2e-0652.8
NC_011969:3627980:365313136531313654000870Bacillus cereus Q1 chromosome, complete genomesporulation sigma factor sigg3e-0652.4
NC_010676:2869936:2882060288206028840571998Burkholderia phytofirmans PsJN chromosome 2, complete sequenceRNA polymerase, sigma 70 subunit, RpoD3e-0652.4
NC_017262:623351:625601625601626509909Zymomonas mobilis subsp. mobilis ATCC 10988 chromosome, completeRNA polymerase sigma-32 subunit RpoH3e-0652.4
NC_009482:87193:958219582196795975Synechococcus sp. RCC307 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-0652.4
NC_011386:136223:1551691551691563321164Oligotropha carboxidovorans OM5, complete genomeRNA polymerase sigma factor RpoD4e-0652
NC_015684:362236:3723743723743735401167Oligotropha carboxidovorans OM5 chromosome, complete genome4e-0652
NC_008609:112340:130809130809131687879Pelobacter propionicus DSM 2379, complete genomeRNA polymerase, sigma 32 subunit, RpoH4e-0652
NC_010118:207843:2067912067912078461056Candidatus Sulcia muelleri GWSS, complete genomeRNA polymerase sigma factor rpoD4e-0652
NC_009930:152500:1650481650481664781431Acaryochloris marina MBIC11017 plasmid pREB5, complete sequenceRNA polymerase sigma factor domain protein4e-0652
NC_012806:105133:1119901119901135911602Mycoplasma conjunctivae, complete genomeRNA polymerase sigma factor6e-0651.2
NC_007974:1135863:1146392114639211482451854Ralstonia metallidurans CH34 chromosome 2, complete sequencesigma 70 (RpoD)7e-0651.2
NC_020908:1889759:1893970189397018961262157Octadecabacter arcticus 238, complete genomeputative RNA polymerase sima factor8e-0650.8