Pre_GI: BLASTP Hits

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Query: NC_010001:3266561:3273439 Clostridium phytofermentans ISDg, complete genome

Start: 3273439, End: 3275037, Length: 1599

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012778:841934:8541648541648557711608Eubacterium eligens ATCC 27750, complete genomehypothetical protein6e-88325
NC_014377:1089894:1099995109999511014341440Thermosediminibacter oceani DSM 16646 chromosome, complete genomeprotein of unknown function DUF3422e-69263
NC_008346:983816:9973719973719987741404Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein1e-56221
NC_010741:775000:7781337781337801031971Treponema pallidum subsp. pallidum SS14, complete genomehypothetical protein2e-52207
NC_016842:775368:7782697782697802391971Treponema pallidum subsp. pertenue str. SamoaD chromosome, completehypothetical protein2e-52207
NC_016843:775371:7784567784567804261971Treponema pallidum subsp. pertenue str. Gauthier chromosome,hypothetical protein2e-52207
NC_016844:775334:7786237786237805931971Treponema pallidum subsp. pallidum DAL-1 chromosome, completehypothetical protein2e-52207
NC_016848:775822:7787237787237806931971Treponema pallidum subsp. pertenue str. CDC2 chromosome, completehypothetical protein2e-52207
NC_017268:775000:7779357779357799051971Treponema pallidum subsp. pallidum str. Chicago chromosome,putative polymerase2e-52207
NC_021508:775264:7781657781657801351971Treponema pallidum subsp. pallidum SS14, complete genomehypothetical protein2e-52207
NC_015714:768500:7715647715647735341971Treponema paraluiscuniculi Cuniculi A chromosome, complete genomehypothetical protein2e-52207
NC_000919:773784:7766857766857786551971Treponema pallidum subsp. pallidum str. Nichols, complete genomehypothetical protein2e-52207
NC_017243:1499757:1515492151549215174771986Brachyspira intermedia PWS/A chromosome, complete genomePolymerase4e-44179
NC_012225:377441:3900153900153919911977Brachyspira hyodysenteriae WA1, complete genomePolymerase8e-44178
NC_014150:233194:2392902392902412721983Brachyspira murdochii DSM 12563 chromosome, complete genomeprotein of unknown function DUF3422e-43177
NC_014330:2409559:2420925242092524228921968Brachyspira pilosicoli 95/1000 chromosome, complete genomepolymerase3e-37156
NC_018604:1329228:1339002133900213409691968Brachyspira pilosicoli WesB complete genomepolymerase3e-37156
NC_019908:852230:8573018573018592681968Brachyspira pilosicoli P43/6/78 chromosome, complete genomepolymerase3e-37156
NC_018607:1134900:1144679114467911466461968Brachyspira pilosicoli B2904 chromosome, complete genomepolymerase3e-37156
NC_014376:3671441:3684239368423936859931755Clostridium saccharolyticum WM1 chromosome, complete genomeprotein of unknown function DUF3428e-37155
NC_008710:277207:2814372814372833351899Borrelia turicatae 91E135, complete genomehypothetical protein3e-34146
NC_006156:271410:2781822781822800861905Borrelia garinii PBi chromosome linear, complete sequencehypothetical protein1e-31138
NC_017238:272980:2785312785312804351905Borrelia afzelii PKo chromosome, complete genomehypothetical protein4e-31136
NC_008277:272741:2782922782922801961905Borrelia afzelii PKo, complete genomehypothetical protein4e-31136
NC_001318:270488:2794072794072813111905Borrelia burgdorferi B31, complete genomehypothetical protein3e-30133
NC_011728:269853:2787752787752806791905Borrelia burgdorferi ZS7, complete genomehypothetical protein3e-30133
NC_015921:272517:2779722779722798761905Borrelia bissettii DN127 chromosome, complete genomehypothetical protein1e-29131
NC_012225:445500:4627434627434644791737Brachyspira hyodysenteriae WA1, complete genomePredicted polymerase5e-24112
NC_010814:2394250:2395755239575523973171563Geobacter lovleyi SZ, complete genomeprotein of unknown function DUF3421e-21104
NC_004460:1237129:1252993125299312546661674Vibrio vulnificus CMCP6 chromosome II, complete sequencePredicted polymerase4e-2099.8
NC_005140:1820970:1837308183730818389811674Vibrio vulnificus YJ016 chromosome II, complete sequencepredicted polymerase4e-2099.8
NC_014377:1512217:1512217151221715140671851Thermosediminibacter oceani DSM 16646 chromosome, complete genomeprotein of unknown function DUF3426e-2099.4
NC_006510:1501487:1517620151762015203252706Geobacillus kaustophilus HTA426, complete genomehypothetical protein7e-2099
NC_015577:1462874:1486119148611914875011383Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein3e-1997.1
NC_014220:2037560:2043881204388120458902010Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeprotein of unknown function DUF3426e-1996.3
NC_014328:1046958:1048918104891810508701953Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein1e-1894.7
NC_012563:3090954:3116281311628131183142034Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein2e-1791.3
NC_015573:569625:5722575722575741371881Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein5e-1789.7
NC_009495:2876865:2902192290219229042252034Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein1e-1688.2
NC_009697:2790277:2815604281560428176372034Clostridium botulinum A str. ATCC 19397 chromosome, completehypothetical protein1e-1688.2
NC_012881:3727150:3743593374359337447051113Desulfovibrio salexigens DSM 2638, complete genomeprotein of unknown function DUF3425e-1686.3
NC_009784:2129069:2129069212906921307691701Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein6e-1686.3
NC_010516:2900057:2921338292133829233712034Clostridium botulinum B1 str. Okra, complete genomehypothetical protein7e-1685.9
NC_009699:2901497:2925871292587129279042034Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein7e-1685.9
NC_010520:2937981:2961694296169429637272034Clostridium botulinum A3 str. Loch Maree, complete genomehypothetical protein1e-1585.5
NC_020409:437781:4503654503654514861122Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein1e-1585.1
NC_008593:1060548:1071087107108710730541968Clostridium novyi NT, complete genomehypothetical protein2e-1584.3
NC_015565:2827444:2834781283478128363521572Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehypothetical protein6e-1479.3
NC_020291:4502467:4504742450474245064811740Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein4e-1273.2
NC_010424:448865:4687554687554704791725Candidatus Desulforudis audaxviator MP104C, complete genomeprotein of unknown function DUF3423e-1067
NC_020291:4944835:5002628500262850046041977Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative polymerase with PALM domain, HD hydrolase domain and Zn ribbon3e-0757