Pre_GI: BLASTP Hits

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Query: NC_010001:2125500:2140465 Clostridium phytofermentans ISDg, complete genome

Start: 2140465, End: 2141511, Length: 1047

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:1133759:1146360114636011474091050Clostridium clariflavum DSM 19732 chromosome, complete genomehydrogenase expression/formation protein HypD1e-104380
NC_011898:513835:5328455328455339301086Clostridium cellulolyticum H10, complete genomehydrogenase expression/formation protein HypD3e-79295
NC_015499:1097432:1103515110351511045941080Thermodesulfobium narugense DSM 14796 chromosome, complete genomehydrogenase expression/formation protein HypD3e-78292
NC_021182:1983456:2000868200086820019501083Clostridium pasteurianum BC1, complete genomehydrogenase expression/formation protein HypD6e-78291
NC_015555:114977:1252101252101262621053Thermoanaerobacterium xylanolyticum LX-11 chromosome, completehydrogenase expression/formation protein HypD3e-75281
NC_013921:1614397:1619460161946016205181059Thermoanaerobacter italicus Ab9 chromosome, complete genomehydrogenase expression/formation protein HypD2e-72273
NC_017192:1841987:1853660185366018547871128Arcobacter sp. L, complete genomehydrogenase expression/formation protein HypD2e-72272
NC_009801:3013838:3015327301532730164481122Escherichia coli E24377A, complete genomehydrogenase expression/formation protein HypD3e-72272
NC_008253:2828573:2829708282970828308291122Escherichia coli 536, complete genomehydrogenase isoenzymes formation protein HYpd3e-72271
NC_014209:1580423:1585434158543415864921059Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,hydrogenase expression/formation protein HypD2e-71270
NC_010067:84093:1110881110881122091122Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-71270
NC_015958:141500:1501151501151511761062Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehydrogenase expression/formation protein HypD1e-71270
NC_007413:5742406:5759737575973757608881152Anabaena variabilis ATCC 29413, complete genomeHydrogenase formation HypD protein4e-69261
NC_007575:1484305:1493160149316014943021143Sulfurimonas denitrificans DSM 1251, complete genomehydrogenase formation HypD protein4e-69261
NC_013730:4636575:4653776465377646548731098Spirosoma linguale DSM 74, complete genomehydrogenase expression/formation protein HypD2e-68259
NC_010278:1467146:1471962147196214730771116Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hydrogenase maturation factor6e-68258
NC_014328:2518081:2529858252985825309161059Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative hydrogenase expression/formation protein HypD5e-68258
NC_010794:1673049:1673049167304916741551107Methylacidiphilum infernorum V4, complete genome[NiFe] hydrogenase metallocenter assembly protein HypD4e-68258
NC_015565:348941:3700743700743711951122Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehydrogenase expression/formation protein HypD1e-67256
NC_003272:784437:8032858032858044361152Nostoc sp. PCC 7120, complete genomehydrogenase expression/formation protein8e-67254
NC_013222:229190:2449472449472460471101Robiginitalea biformata HTCC2501, complete genomeputative [NiFe] hydrogenase expression/formation protein2e-66253
NC_010336:852915:8643368643368654271092Francisella philomiragia subsp. philomiragia ATCC 25017, completehydrogenase expression/formation protein HypD2e-66253
NC_009901:2427291:2450325245032524514431119Shewanella pealeana ATCC 700345, complete genomehydrogenase expression/formation protein HypD6e-66251
NC_008698:1556223:1559975155997515612101236Thermofilum pendens Hrk 5, complete genomehydrogenase formation HypD protein1e-65250
NC_007626:1746475:1778045177804517791841140Magnetospirillum magneticum AMB-1, complete genomeHydrogenase expression/formation protein hypD21e-65249
NC_009635:905768:9207429207429218631122Methanococcus aeolicus Nankai-3 chromosome, complete genomehydrogenase expression/formation protein HypD3e-65249
NC_014408:1340016:1340016134001613410711056Methanothermobacter marburgensis str. Marburg chromosome, completehydrogenase expression/formation protein HypD2e-64246
NC_010334:2749250:2752746275274627538671122Shewanella halifaxensis HAW-EB4, complete genomehydrogenase expression/formation protein HypD2e-64246
NC_009937:673820:6765636765636776841122Azorhizobium caulinodans ORS 571, complete genomehydrogenase formation protein2e-64246
NC_004463:1898648:1900381190038119015321152Bradyrhizobium japonicum USDA 110, complete genomehydrogenase expression/formation protein4e-64245
NC_015216:2276929:2293935229393522949931059Methanobacterium sp. AL-21 chromosome, complete genomehydrogenase expression/formation protein HypD5e-64244
NC_012483:3529895:3540046354004635411731128Acidobacterium capsulatum ATCC 51196, complete genomehydrogenase expression/formation protein HypD8e-64244
NC_019942:987134:1048364104836410494611098Aciduliprofundum sp. MAR08-339, complete genomehydrogenase expression/formation protein HypD1e-63243
NC_017273:352150:3731133731133742371125Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completehydrogenase expression/formation protein HypD3e-63242
NC_009051:1118486:1121028112102811220591032Methanoculleus marisnigri JR1, complete genomehydrogenase expression/formation protein HypD2e-62239
NC_011832:1949717:1965167196516719661921026Candidatus Methanosphaerula palustris E1-9c, complete genomehydrogenase expression/formation protein HypD5e-62238
NC_008340:2272692:2288590228859022897261137Alkalilimnicola ehrlichei MLHE-1, complete genomehydrogenase expression/formation protein HypD4e-61235
NC_015557:30622:4480244802458961095Hydrogenobaculum sp. 3684 chromosome, complete genomehydrogenase expression/formation protein HypD5e-61234
NC_020411:28995:4483644836459301095Hydrogenobaculum sp. HO, complete genomeHydrogenase maturation protein HypD5e-61234
NC_015587:28997:4483844838459321095Hydrogenobaculum sp. SHO chromosome, complete genomehydrogenase expression/formation protein HypD5e-61234
NC_014926:875948:8821958821958832561062Thermovibrio ammonificans HB-1 chromosome, complete genomehydrogenase expression/formation protein HypD1e-60233
NC_016070:167362:1813101813101825961287Thermoproteus tenax Kra 1, complete genomehydrogenase expression/formation protein3e-60232
NC_009092:1989977:2007954200795420090691116Shewanella loihica PV-4, complete genomehydrogenase expression/formation protein HypD3e-60232
NC_014507:1373325:1373325137332513743531029Methanoplanus petrolearius DSM 11571 chromosome, complete genomehydrogenase expression/formation protein HypD8e-60231
NC_011666:3001513:3018769301876930199141146Methylocella silvestris BL2, complete genomehydrogenase expression/formation protein HypD8e-58224
NC_008576:1061171:1076962107696210780621101Magnetococcus sp. MC-1, complete genomehydrogenase formation HypD protein2e-39163