Pre_GI: BLASTP Hits

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Query: NC_010001:1:9911 Clostridium phytofermentans ISDg, complete genome

Start: 9911, End: 10753, Length: 843

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012778:2997:104121041211254843Eubacterium eligens ATCC 27750, complete genomefumarate hydratase2e-104378
NC_014376:6296:157201572016562843Clostridium saccharolyticum WM1 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit2e-97355
NC_014387:79808:902839028391125843Butyrivibrio proteoclasticus B316 chromosome 1, complete genomefumarate hydratase alpha subunit FumA8e-97353
NC_012781:4065:883688369681846Eubacterium rectale ATCC 33656, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit1e-96352
NC_009698:3553365:355694335569433557785843Clostridium botulinum A str. Hall chromosome, complete genomefumarate hydratase3e-87321
NC_009697:3659834:365983436598343660676843Clostridium botulinum A str. ATCC 19397 chromosome, completefumarate hydratase3e-87321
NC_014328:4387303:441420444142044415046843Clostridium ljungdahlii ATCC 49587 chromosome, complete genomefumarate hydratase subunit alpha1e-86320
NC_004557:2711702:272045227204522721300849Clostridium tetani E88, complete genomefumarate hydratase2e-85315
NC_011837:238160:270031270031270873843Clostridium kluyveri NBRC 12016, complete genomefumarate hydratase2e-82305
NC_009706:238160:270031270031270873843Clostridium kluyveri DSM 555 chromosome, complete genomefumarate hydratase2e-82305
NC_009633:3457185:348051034805103481352843Alkaliphilus metalliredigens QYMF chromosome, complete genomefumarate hydratase2e-82305
NC_019970:35985:634306343064272843Thermoanaerobacterium thermosaccharolyticum M0795, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily4e-82304
NC_014410:51711:768537685377695843Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit8e-82303
NC_015555:49842:771617716178003843Thermoanaerobacterium xylanolyticum LX-11 chromosome, completehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit7e-80297
NC_015958:84270:960099600996851843Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha1e-79296
NC_009454:1389974:140318314031831404025843Pelotomaculum thermopropionicum SI, complete genomefumarate hydratase1e-79296
NC_015565:1511426:151734015173401518191852Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha3e-78291
NC_010320:1769486:178450317845031785345843Thermoanaerobacter sp. X514 chromosome, complete genomefumarate hydratase5e-77287
NC_014538:73272:798957989580737843Thermoanaerobacter sp. X513 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha5e-77287
NC_010718:2551000:256200125620012562843843Natranaerobius thermophilus JW/NM-WN-LF, complete genomefumarase alpha subunit7e-77287
NC_019978:2036779:203815520381552039018864Halobacteroides halobius DSM 5150, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily5e-76284
NC_012225:1657248:167212216721221672964843Brachyspira hyodysenteriae WA1, complete genomefumarate hydratase7e-76283
NC_009802:1827138:184514018451401845985846Campylobacter concisus 13826, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha region4e-75281
NC_011898:2907017:292400329240032924845843Clostridium cellulolyticum H10, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit8e-75280
NC_014378:525717:525717525717526559843Acetohalobium arabaticum DSM 5501 chromosome, complete genomefumarase alpha subunit7e-73273
NC_007974:2048000:206977520697752070617843Ralstonia metallidurans CH34 chromosome 2, complete sequencehydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region2e-71268
NC_017243:424132:428630428630429472843Brachyspira intermedia PWS/A chromosome, complete genomefumarate hydratase5e-71267
NC_012438:565419:571665571665572510846Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomefumarate hydratase3e-69261
NC_012440:1080675:108458410845841085429846Persephonella marina EX-H1, complete genomeL(+)-tartrate dehydratase subunit alpha (L-TTD alpha)3e-69261
NC_010730:627465:640083640083640928846Sulfurihydrogenibium sp. YO3AOP1, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit2e-68259
NC_015499:197945:207049207049207888840Thermodesulfobium narugense DSM 14796 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit9e-67253
NC_012115:1122905:113245811324581133318861Nautilia profundicola AmH, complete genomefumarate hydratase, alpha subunit2e-63243
NC_009662:837500:844243844243845106864Nitratiruptor sp. SB155-2, complete genomefumarate/tartrate hydratase, alpha subunit6e-61234
NC_011149:779903:789153789153789998846Salmonella enterica subsp. enterica serovar Agona str. SL483,fumarate hydratase5e-60231
NC_011080:819103:829831829831830676846Salmonella enterica subsp. enterica serovar Newport str. SL254,fumarate hydratase5e-60231
NC_011083:862901:873717873717874562846Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,fumarate hydratase5e-60231
NC_012125:793812:802678802678803523846Salmonella enterica subsp. enterica serovar Paratyphi C strainfumarate hydratase5e-60231
NC_011294:781170:784631784631785476846Salmonella enterica subsp. enterica serovar Enteritidis strfumarate hydratase4e-60231
NC_011205:839425:849661849661850542882Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853fumarate hydratase3e-60231
NC_016831:2209834:221974622197462220627882Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative hydro-lyase3e-60231
NC_006905:848000:854123854123854968846Salmonella enterica subsp. enterica serovar Choleraesuis strfumarate hydratase1e-59230
NC_003197:815964:825478825478826323846Salmonella typhimurium LT2, complete genomefumarate hydratase7e-60230
NC_016810:819489:824734824734825579846Salmonella enterica subsp. enterica serovar Typhimurium strputative hydro-lyase7e-60230
NC_016856:819482:825820825820826665846Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sfumarate hydratase7e-60230
NC_016857:819429:824734824734825615882Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74fumarate hydratase7e-60230
NC_016860:857500:864308864308865153846Salmonella enterica subsp. enterica serovar Typhimurium strfumarate hydratase7e-60230
NC_016863:819478:825820825820826665846Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1fumarate hydratase7e-60230
NC_017046:819414:824719824719825564846Salmonella enterica subsp. enterica serovar Typhimurium str. 798hydro-lyase7e-60230
NC_011274:793681:802525802525803370846Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91fumarate hydratase1e-59229
NC_014935:342491:368246368246369097852Nitratifractor saLSUginis DSM 16511 chromosome, complete genomefumarase alpha subunit4e-57221
NC_011661:1332309:135741313574131358255843Dictyoglomus turgidum DSM 6724, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit1e-56219
NC_009648:838000:845712845712846557846Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomefumarate hydratase1e-56219
NC_015682:205900:222628222628223467840Thermodesulfobacterium sp. OPB45 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha5e-56218
NC_011297:1167615:117701911770191177861843Dictyoglomus thermophilum H-6-12, complete genomefumarate hydratase6e-56217
NC_010102:2287934:229787722978772298722846Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-54213
NC_014910:1200605:1218907121890712204661560Alicycliphilus denitrificans BC chromosome, complete genomehydro-lyase, fe-s type, tartrate/fumarate subfamily, alpha subunit3e-44179
NC_020389:3106847:311177831117783112620843Methanosarcina mazei Tuc01, complete genomeFumarate hydratase class I, aerobic/ L(+)-tartrate dehydratase alpha subunit6e-44177
NC_003901:3698164:371562737156273716520894Methanosarcina mazei Go1, complete genomefumarate hydratase1e-43176
NC_003552:3092456:309581730958173096671855Methanosarcina acetivorans C2A, complete genomefumarate hydratase3e-43175
NC_008390:2448379:2467096246709624686191524Burkholderia cepacia AMMD chromosome 1, complete sequencehydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit4e-42171
NC_014923:5868000:5880453588045358820061554Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit1e-41170
NC_015675:6423000:6435124643512464366771554Mesorhizobium opportunistum WSM2075 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha1e-41170
NC_019973:5797000:5809413580941358109661554Mesorhizobium australicum WSM2073, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily1e-41170
NC_014153:2187409:2205868220586822074031536Thiomonas intermedia K12 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit1e-41169
NC_010524:3391075:3391075339107533926011527Leptothrix cholodnii SP-6, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit2e-41169
NC_014122:726070:743594743594744433840Methanocaldococcus infernus ME chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit2e-41169
NC_009659:997779:99938199938110009191539Janthinobacterium sp. Marseille chromosome, complete genomefumarate hydratase, class I2e-40166
NC_009078:510525:5105255105255120601536Burkholderia pseudomallei 1106a chromosome II, complete sequencefumarate hydratase, class I2e-40166
NC_015856:3912195:3912871391287139144271557Collimonas fungivorans Ter331 chromosome, complete genomefumarate hydratase class I, aerobic2e-40166
NC_018691:2863659:2867498286749828690241527Alcanivorax dieselolei B5 chromosome, complete genomeFumarate hydratase I, alpha subunit domain protein6e-39161
NC_015320:1260344:128354412835441284362819Archaeoglobus veneficus SNP6 chromosome, complete genomehydro-lyase subunit alpha1e-38160
NC_004556:1132354:1145975114597511474921518Xylella fastidiosa Temecula1, complete genomefumarate hydratase1e-35150
NC_009712:669647:698784698784699605822Candidatus Methanoregula boonei 6A8, complete genometartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit8e-35147
NC_014804:1354970:135799213579921358855864Thermococcus barophilus MP chromosome, complete genomefumarate hydratase class I aerobic1e-34146
NC_019942:987134:103055410305541031405852Aciduliprofundum sp. MAR08-339, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily1e-32140
NC_014507:2276000:228628622862862287119834Methanoplanus petrolearius DSM 11571 chromosome, complete genomeFe-S type tartrate/fumarate subfamily hydro-lyase subunit alpha2e-31136
NC_006526:1303635:1321511132151113230341524Zymomonas mobilis subsp. mobilis ZM4, complete genomefumarate hydratase5e-31134
NC_018145:50237:5023750237517601524Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completeFe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha6e-31134
NC_000961:1481685:148087614808761481694819Pyrococcus horikoshii OT3, complete genomefumarate hydratase8e-27120
NC_012590:2501593:2512612251261225136461035Corynebacterium aurimucosum ATCC 700975, complete genometartrate dehydratase1e-21103
NC_021150:3200959:322453432245343225394861Azotobacter vinelandii CA6, complete genometartrate dehydratase subunit alpha4e-21102
NC_012560:3200961:322453632245363225396861Azotobacter vinelandii DJ, complete genomeL-tartrate dehydratase alpha subunit4e-21102
NC_012792:310443:320835320835321770936Variovorax paradoxus S110 chromosome 2, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit5e-21101
NC_013939:913890:914927914927915796870Deferribacter desulfuricans SSM1, complete genomefumarate hydratase class I subunit alpha4e-1788.6
NC_007626:3393940:344139834413983442297900Magnetospirillum magneticum AMB-1, complete genomeTartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain3e-1685.9
NC_008343:2020785:2036188203618820378401653Granulibacter bethesdensis CGDNIH1, complete genomefumarate hydratase1e-1583.6
CP002797:4411763:4411763441176344134091647Escherichia coli NA114, complete genomeFumarate hydratase class I5e-1581.6
NC_009778:1902995:1902995190299519046411647Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-1581.3
NC_015672:699904:703704703704704570867Flexistipes sinusarabici DSM 4947 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha1e-1480.5
NC_020126:4622371:4652616465261646542471632Myxococcus stipitatus DSM 14675, complete genomefumarate hydratase, class I1e-1377
NC_019968:8397:2957629576312251650Prevotella dentalis DSM 3688 chromosome 2, complete sequencehydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily2e-1376.6
NC_010694:2138000:2183060218306021847061647Erwinia tasmaniensis, complete genomeFumarase A4e-1375.5
NC_012214:2221702:2271989227198922736351647Erwinia pyrifoliae Ep1/96, complete genomeFumarase A6e-1375.1
NC_009328:448224:4482244482244497711548Geobacillus thermodenitrificans NG80-2 chromosome, complete genomefumarase5e-1375.1
NC_008800:4389687:4397629439762943992751647Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,fumarate hydratase class I, anaerobic7e-1374.7
NC_015224:4314116:4321411432141143230571647Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,fumarate hydratase class I, anaerobic9e-1374.3
NC_013855:964000:9872169872169889851770Azospirillum sp. B510 plasmid pAB510a, complete sequencefumarate hydratase, class I3e-1272.8
NC_011565:620801:6544006544006560281629Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,fumarate hydratase3e-1272.4
NC_010067:3247169:3250028325002832516741647Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1272
NC_015160:612000:6310286310286326381611Odoribacter splanchnicus DSM 20712 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit1e-1170.5
NC_016610:1310275:1311001131100113126411641Tannerella forsythia ATCC 43037 chromosome, complete genomefumarate hydratase class I, anaerobic3e-1169.3
NC_012779:2281700:2284344228434422859901647Edwardsiella ictaluri 93-146, complete genomefumarate hydratase class I, anaerobic4e-1168.9
NC_020125:194691:2217722217722233791608Riemerella anatipestifer RA-CH-2, complete genomeTartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain protein3e-1065.9
NC_016001:364666:3679143679143695151602Flavobacterium branchiophilum, complete genomefumarate hydratase class I5e-1065.1
NC_015574:2057602:206207020620702062936867Methanobacterium sp. SWAN-1 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha4e-0962
NC_015216:405657:407972407972408829858Methanobacterium sp. AL-21 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha8e-0754.7