Pre_GI: BLASTP Hits

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Query: NC_010001:1:10807 Clostridium phytofermentans ISDg, complete genome

Start: 10807, End: 11355, Length: 549

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012778:2997:112701127011821552Eubacterium eligens ATCC 27750, complete genomefumarate hydratase1e-66252
NC_012781:4065:9844984410395552Eubacterium rectale ATCC 33656, complete genomefumarate hydratase subunit B5e-63239
NC_014376:6296:165621656217140579Clostridium saccharolyticum WM1 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit1e-62238
NC_009633:3457185:347993934799393480496558Alkaliphilus metalliredigens QYMF chromosome, complete genometartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta4e-60230
NC_009698:3553365:355628835562883556842555Clostridium botulinum A str. Hall chromosome, complete genometartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta2e-58224
NC_014328:4387303:441357444135744414140567Clostridium ljungdahlii ATCC 49587 chromosome, complete genomefumarate hydratase subunit beta1e-57222
NC_004557:2711702:271988127198812720438558Clostridium tetani E88, complete genomefumarate hydratase1e-57222
NC_015499:1640500:165739916573991657950552Thermodesulfobium narugense DSM 14796 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit8e-58222
NC_014387:79808:911229112291685564Butyrivibrio proteoclasticus B316 chromosome 1, complete genomefumarate hydratase beta subunit FumB2e-56218
NC_015958:84270:968729687297432561Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta4e-56217
NC_011898:2907017:292343229234322923989558Clostridium cellulolyticum H10, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit4e-55213
NC_010320:1769486:178392317839231784483561Thermoanaerobacter sp. X514 chromosome, complete genometartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta3e-54210
NC_014538:73272:807578075781317561Thermoanaerobacter sp. X513 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta3e-54210
NC_011830:4645453:466769946676994668256558Desulfitobacterium hafniense DCB-2, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit4e-54210
NC_013799:282500:306815306815307372558Hydrogenobacter thermophilus TK-6, complete genomefumarate hydratase beta subunit8e-54209
NC_017161:282500:306805306805307362558Hydrogenobacter thermophilus TK-6 chromosome, complete genomeFe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta8e-54209
NC_012440:1080675:108544010854401086003564Persephonella marina EX-H1, complete genomefumarate hydratase, class I1e-53208
NC_011837:238160:270925270925271491567Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-53208
NC_009706:238160:270925270925271491567Clostridium kluyveri DSM 555 chromosome, complete genomeprotein FumB1e-53208
NC_012225:1657248:167154616715461672076531Brachyspira hyodysenteriae WA1, complete genomefumarate hydratase2e-53208
NC_017243:424132:429518429518430048531Brachyspira intermedia PWS/A chromosome, complete genomefumarate hydratase6e-53206
NC_003869:74836:824298242982992564Thermoanaerobacter tengcongensis MB4, complete genomeTartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain6e-53206
NC_014410:51711:777237772378280558Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit6e-53206
NC_015555:49842:780277802778584558Thermoanaerobacterium xylanolyticum LX-11 chromosome, completehydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit1e-52205
NC_019970:35985:643006430064848549Thermoanaerobacterium thermosaccharolyticum M0795, complete genomehydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily1e-52205
NC_010730:627465:639509639509640072564Sulfurihydrogenibium sp. YO3AOP1, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit2e-50198
NC_014935:342491:369109369109369666558Nitratifractor saLSUginis DSM 16511 chromosome, complete genomehydro-lyase, fe-s type, tartrate/fumarate subfamily, beta subunit2e-50197
NC_012438:565419:573117573117573680564Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomefumarate hydratase, class I3e-50197
NC_012115:1122905:113189411318941132448555Nautilia profundicola AmH, complete genomeC-terminal fumarate hydratase, class I5e-50196
NC_014378:525717:526575526575527108534Acetohalobium arabaticum DSM 5501 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit1e-49195
NC_019978:2036779:203762420376242038151528Halobacteroides halobius DSM 5150, complete genomehydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily2e-48191
NC_009454:1389974:140408114040811404635555Pelotomaculum thermopropionicum SI, complete genomefumarase C-terminal domain-containing protein2e-47188
NC_015565:1511426:151628515162851516839555Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta3e-46184
NC_009802:1827138:184457018445701845130561Campylobacter concisus 13826, complete genomeL-cystine import ATP-binding protein TcyC7e-46182
NC_009662:837500:845117845117845671555Nitratiruptor sp. SB155-2, complete genomefumarate/tartrate hydratase, beta subunit8e-46182
NC_018145:50237:5023750237517601524Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completeFe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha6e-43173
NC_010718:2551000:256128725612872561847561Natranaerobius thermophilus JW/NM-WN-LF, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit1e-42172
NC_006526:1303635:1321511132151113230341524Zymomonas mobilis subsp. mobilis ZM4, complete genomefumarate hydratase3e-42171
NC_007974:2048000:206919820691982069761564Ralstonia metallidurans CH34 chromosome 2, complete sequencehydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region2e-39161
NC_018691:2863659:2867498286749828690241527Alcanivorax dieselolei B5 chromosome, complete genomeFumarate hydratase I, alpha subunit domain protein4e-38157
NC_004556:1132354:1145975114597511474921518Xylella fastidiosa Temecula1, complete genomefumarate hydratase7e-38156
NC_008390:2448379:2467096246709624686191524Burkholderia cepacia AMMD chromosome 1, complete sequencehydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit5e-35147
NC_009078:510525:5105255105255120601536Burkholderia pseudomallei 1106a chromosome II, complete sequencefumarate hydratase, class I9e-35146
NC_014923:5868000:5880453588045358820061554Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit8e-35146
NC_015675:6423000:6435124643512464366771554Mesorhizobium opportunistum WSM2075 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha8e-35146
NC_019973:5797000:5809413580941358109661554Mesorhizobium australicum WSM2073, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily8e-35146
NC_014910:1200605:1218907121890712204661560Alicycliphilus denitrificans BC chromosome, complete genomehydro-lyase, fe-s type, tartrate/fumarate subfamily, alpha subunit6e-35146
NC_011297:1167615:117649811764981177022525Dictyoglomus thermophilum H-6-12, complete genomefumarate hydratase, beta subunit2e-34144
NC_015856:3912195:3912871391287139144271557Collimonas fungivorans Ter331 chromosome, complete genomefumarate hydratase class I, aerobic4e-34144
NC_014153:2187409:2205868220586822074031536Thiomonas intermedia K12 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit7e-34143
NC_009659:997779:99938199938110009191539Janthinobacterium sp. Marseille chromosome, complete genomefumarate hydratase, class I1e-33142
NC_011661:1332309:135689213568921357416525Dictyoglomus turgidum DSM 6724, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit2e-33142
NC_010524:3391075:3391075339107533926011527Leptothrix cholodnii SP-6, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit6e-32136
NC_010102:2287934:229874022987402299282543Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-31135
NC_017046:819414:824159824159824701543Salmonella enterica subsp. enterica serovar Typhimurium str. 798hydro-lyase2e-31135
NC_003197:815964:824918824918825463546Salmonella typhimurium LT2, complete genomefumarate hydratase2e-31135
NC_011149:779903:788593788593789138546Salmonella enterica subsp. enterica serovar Agona str. SL483,hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta region2e-31135
NC_011083:862901:873157873157873702546Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-31135
NC_011205:839425:849101849101849646546Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hydro-lyase2e-31135
NC_011274:793681:801965801965802510546Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hydro-lyase2e-31135
NC_011294:781170:784071784071784616546Salmonella enterica subsp. enterica serovar Enteritidis strhydro-lyase2e-31135
NC_016810:819489:824174824174824719546Salmonella enterica subsp. enterica serovar Typhimurium strputative hydro-lyase2e-31135
NC_012125:793812:802118802118802663546Salmonella enterica subsp. enterica serovar Paratyphi C strainfumarate hydratase1e-31135
NC_006905:848000:853563853563854108546Salmonella enterica subsp. enterica serovar Choleraesuis strfumarate hydratase Class I anaerobic1e-31135
NC_011080:819103:829271829271829816546Salmonella enterica subsp. enterica serovar Newport str. SL254,fumarate hydratase I, beta subunit1e-31135
NC_016860:857500:863748863748864293546Salmonella enterica subsp. enterica serovar Typhimurium strhydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta region2e-31135
NC_016857:819429:824174824174824719546Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta region2e-31135
NC_016831:2209834:222064222206422221187546Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative hydro-lyase2e-31135
NC_015320:1260344:128290212829021283528627Archaeoglobus veneficus SNP6 chromosome, complete genomehydro-lyase subunit beta2e-31134
NC_016863:819478:825260825260825805546Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1fumarate hydratase4e-31134
NC_016856:819482:825260825260825805546Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sfumarate hydratase4e-31134
NC_015562:1189111:122629812262981226897600Methanotorris igneus Kol 5 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta4e-28124
NC_014804:1354970:136900913690091369533525Thermococcus barophilus MP chromosome, complete genomefumarate hydratase class I aerobic1e-26119
NC_014507:2276000:228573222857322286289558Methanoplanus petrolearius DSM 11571 chromosome, complete genomeFe-S type tartrate/fumarate subfamily hydro-lyase subunit beta4e-26117
NC_003552:3092456:309667130966713097261591Methanosarcina acetivorans C2A, complete genomefumarate hydratase1e-25115
NC_020389:3106847:311262031126203113198579Methanosarcina mazei Tuc01, complete genomeFumarate hydratase class I, aerobic/L(+)-tartrate dehydratase beta subunit3e-25114
NC_003901:3698164:371652037165203717098579Methanosarcina mazei Go1, complete genomefumarate hydratase3e-25114
NC_014122:842560:852587852587853129543Methanocaldococcus infernus ME chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit3e-24110
NC_009712:669647:698224698224698787564Candidatus Methanoregula boonei 6A8, complete genometartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit5e-24110
NC_010525:1177154:119545011954501196055606Thermoproteus neutrophilus V24Sta, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit6e-24110
NC_013790:1081757:109898810989881099518531Methanobrevibacter ruminantium M1 chromosome, complete genomefumarate hydratase FumA36e-24110
NC_013156:182896:207249207249207839591Methanocaldococcus fervens AG86, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit1e-23109
NC_015160:612000:6310286310286326381611Odoribacter splanchnicus DSM 20712 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit1e-22106
NC_009515:705911:728635728635729156522Methanobrevibacter smithii ATCC 35061, complete genomefumarate hydratase, class I2e-22105
NC_007626:3393940:344079334407933441401609Magnetospirillum magneticum AMB-1, complete genomeTartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain6e-22103
NC_012560:3200961:322393132239313224539609Azotobacter vinelandii DJ, complete genomeL(+)-tartrate dehydratase beta subunit protein9e-22103
NC_021150:3200959:322392932239293224537609Azotobacter vinelandii CA6, complete genomeL(+)-tartrate dehydratase subunit beta9e-22103
NC_012779:2281700:2284344228434422859901647Edwardsiella ictaluri 93-146, complete genomefumarate hydratase class I, anaerobic2e-2098.6
NC_020125:194691:2217722217722233791608Riemerella anatipestifer RA-CH-2, complete genomeTartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain protein2e-2098.6
NC_010694:2138000:2183060218306021847061647Erwinia tasmaniensis, complete genomeFumarase A2e-2098.6
NC_011565:620801:6544006544006560281629Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,fumarate hydratase3e-2098.2
NC_008343:2020785:2036188203618820378401653Granulibacter bethesdensis CGDNIH1, complete genomefumarate hydratase3e-2097.8
NC_013855:964000:9872169872169889851770Azospirillum sp. B510 plasmid pAB510a, complete sequencefumarate hydratase, class I3e-2097.8
NC_015224:4314116:4321411432141143230571647Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,fumarate hydratase class I, anaerobic3e-2097.8
CP002797:4411763:4411763441176344134091647Escherichia coli NA114, complete genomeFumarate hydratase class I4e-2097.4
NC_012214:2221702:2271989227198922736351647Erwinia pyrifoliae Ep1/96, complete genomeFumarase A6e-2097.1
NC_008800:4389687:4397629439762943992751647Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,fumarate hydratase class I, anaerobic1e-1995.9
NC_013939:913890:914353914353914937585Deferribacter desulfuricans SSM1, complete genomefumarate hydratase class I subunit beta2e-1995.5
NC_020126:4622371:4652616465261646542471632Myxococcus stipitatus DSM 14675, complete genomefumarate hydratase, class I2e-1995.5
NC_009328:448224:4482244482244497711548Geobacillus thermodenitrificans NG80-2 chromosome, complete genomefumarase2e-1995.1
NC_009778:1902995:1902995190299519046411647Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-1994.7
NC_016001:364666:3679143679143695151602Flavobacterium branchiophilum, complete genomefumarate hydratase class I3e-1994.7
NC_009975:1034144:105616710561671056742576Methanococcus maripaludis C6, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit4e-1994.4
NC_000961:1481685:148168514816851482185501Pyrococcus horikoshii OT3, complete genomefumarate hydratase4e-1994.4
NC_010067:3247169:3250028325002832516741647Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-1994
NC_019968:8397:2957629576312251650Prevotella dentalis DSM 3688 chromosome 2, complete sequencehydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily2e-1892
NC_016610:1310275:1311001131100113126411641Tannerella forsythia ATCC 43037 chromosome, complete genomefumarate hydratase class I, anaerobic4e-1890.9
NC_014222:1264000:126404812640481264647600Methanococcus voltae A3 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit3e-1788.2
NC_015672:699904:703133703133703711579Flexistipes sinusarabici DSM 4947 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta7e-1786.7
NC_019942:987134:103140610314061031978573Aciduliprofundum sp. MAR08-339, complete genomehydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily3e-1684.7
NC_011145:306623:311683311683312258576Anaeromyxobacter sp. K, complete genomeFe-S type hydro-lyase tartrate/fumarate beta region5e-1580.9
NC_012590:2501593:251194025119402512581642Corynebacterium aurimucosum ATCC 700975, complete genomeL-tartrate dehydratase7e-1580.1
NC_007760:308500:309179309179309748570Anaeromyxobacter dehalogenans 2CP-C, complete genomeFe-S type hydro-lyase tartrate/fumarate beta region7e-1580.1
NC_011891:315182:320247320247320822576Anaeromyxobacter dehalogenans 2CP-1, complete genomeFe-S type hydro-lyase tartrate/fumarate beta region2e-1478.6
NC_013410:3280039:329974232997423300245504Fibrobacter succinogenes subsp. succinogenes S85 chromosome,Fe-S type hydro-lyase tartrate/fumarate beta region7e-1373.6
NC_012792:310443:320161320161320841681Variovorax paradoxus S110 chromosome 2, complete genomeFe-S type hydro-lyase tartrate/fumarate beta region4e-0857.8