Pre_GI: BLASTP Hits

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Query: NC_010001:1917456:1920371 Clostridium phytofermentans ISDg, complete genome

Start: 1920371, End: 1921045, Length: 675

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010674:1496500:151882715188271519507681Clostridium botulinum B str. Eklund 17B, complete genomehydrogenase accessory protein HypB4e-89327
NC_002967:2194829:219714321971432197805663Treponema denticola ATCC 35405, complete genomehydrogenase accessory protein HypB1e-69262
NC_012778:688621:703884703884704594711Eubacterium eligens ATCC 27750, complete genomehydrogenase nickel incorporation protein HypB5e-68257
NC_012778:688621:704587704587705264678Eubacterium eligens ATCC 27750, complete genomehydrogenase nickel incorporation protein HypB5e-63240
NC_016629:3629848:363394936339493634602654Desulfovibrio africanus str. Walvis Bay chromosome, completehydrogenase nickel incorporation protein HypB6e-51200
NC_010278:1467146:147114114711411471950810Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hydrogenase nickel incorporation protein HypB6e-51200
NC_013173:815696:834992834992835648657Desulfomicrobium baculatum DSM 4028, complete genomehydrogenase accessory protein HypB1e-49196
NC_011666:3001513:302246030224603023341882Methylocella silvestris BL2, complete genomehydrogenase accessory protein HypB2e-48192
NC_007626:1746475:178051117805111781449939Magnetospirillum magneticum AMB-1, complete genomeNi2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase5e-48190
NC_008340:2272692:229228022922802293227948Alkalilimnicola ehrlichei MLHE-1, complete genomehydrogenase accessory protein HypB1e-47189
NC_015312:6717973:672459567245956725413819Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehydrogenase accessory protein HypB7e-47187
NC_020411:28995:401784017840930753Hydrogenobaculum sp. HO, complete genomeHydrogenase nickel incorporation protein HypB2e-46185
NC_015557:30622:401444014440896753Hydrogenobaculum sp. 3684 chromosome, complete genomehydrogenase accessory protein HypB2e-46185
NC_015587:28997:401804018040932753Hydrogenobaculum sp. SHO chromosome, complete genomehydrogenase accessory protein HypB2e-46185
NC_018697:825058:825058825058825801744Cycloclasticus sp. P1 chromosome, complete genomeHydrogenase accessory protein HypB2e-46185
NC_009801:3013838:301419230141923015064873Escherichia coli E24377A, complete genomehydrogenase isoenzymes nickel incorporation protein HypB6e-46184
NC_007413:5742406:576290357629035763748846Anabaena variabilis ATCC 29413, complete genomeHydrogenase accessory protein HypB6e-46184
NC_003272:784437:806344806344807189846Nostoc sp. PCC 7120, complete genomehydrogenase expression/formation protein6e-46183
NC_008253:2828573:282857328285732829445873Escherichia coli 536, complete genomehydrogenase isoenzymes nickel incorporation protein HypB8e-46183
NC_015565:348941:366944366944367609666Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehydrogenase accessory protein HypB3e-45181
NC_010067:84093:112472112472113344873Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-45180
NC_009937:673820:673820673820674770951Azorhizobium caulinodans ORS 571, complete genomehydrogenase accessory protein3e-42171
NC_015660:1784553:180121918012191801914696Geobacillus thermoglucosidasius C56-YS93 chromosome, completehydrogenase accessory protein HypB5e-42171
NC_014650:1763308:178000017800001780695696Geobacillus sp. Y4.1MC1 chromosome, complete genomehydrogenase accessory protein HypB5e-42171
NC_010794:1673049:167760616776061678376771Methylacidiphilum infernorum V4, complete genome[NiFe] hydrogenase nickel incorporation-associated protein HypB, GTPase1e-41169
NC_018515:937994:952775952775953455681Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehydrogenase nickel incorporation protein HypB1e-41169
NC_012483:3529895:353819235381923538872681Acidobacterium capsulatum ATCC 51196, complete genomehydrogenase accessory protein HypB4e-41167
NC_019940:2834850:283739628373962838280885Thioflavicoccus mobilis 8321 chromosome, complete genomehydrogenase nickel incorporation protein HypB9e-41166
NC_007760:535825:558088558088558933846Anaeromyxobacter dehalogenans 2CP-C, complete genomehydrogenase accessory protein HypB1e-40166
NC_021182:1983456:199417619941761994835660Clostridium pasteurianum BC1, complete genomehydrogenase accessory protein HypB2e-40166
NC_021182:1761789:177282817728281773487660Clostridium pasteurianum BC1, complete genomehydrogenase accessory protein HypB2e-40166
NC_009092:1989977:200931720093172010150834Shewanella loihica PV-4, complete genomehydrogenase accessory protein HypB2e-40165
NC_013921:1614397:162295416229541623610657Thermoanaerobacter italicus Ab9 chromosome, complete genomehydrogenase accessory protein HypB5e-40164
NC_016627:1133759:114313411431341143784651Clostridium clariflavum DSM 19732 chromosome, complete genomehydrogenase nickel incorporation protein HypB6e-40164
NC_010001:2125500:213713521371352137785651Clostridium phytofermentans ISDg, complete genomehydrogenase accessory protein HypB9e-40163
NC_010334:2749250:275173727517372752498762Shewanella halifaxensis HAW-EB4, complete genomehydrogenase accessory protein HypB1e-39163
NC_015555:114977:122092122092122745654Thermoanaerobacterium xylanolyticum LX-11 chromosome, completehydrogenase accessory protein HypB7e-39160
NC_009901:2427291:245169124516912452452762Shewanella pealeana ATCC 700345, complete genomehydrogenase accessory protein HypB6e-39160
NC_014209:1580423:158892815889281589584657Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,hydrogenase accessory protein HypB1e-38159
NC_013730:4636575:465755946575594658287729Spirosoma linguale DSM 74, complete genomehydrogenase accessory protein HypB1e-37156
NC_007575:1484305:149459414945941495394801Sulfurimonas denitrificans DSM 1251, complete genomehydrogenase accessory protein HypB4e-37154
NC_017192:1841987:185519318551931855966774Arcobacter sp. L, complete genomehydrogenase expression/formation protein HypB7e-37153
NC_009720:2424975:244236924423692443310942Xanthobacter autotrophicus Py2, complete genomehydrogenase accessory protein HypB6e-35147
NC_003901:2533000:256627525662752566961687Methanosarcina mazei Go1, complete genomehydrogenase expression/formation protein5e-30131
NC_014122:549932:587317587317587967651Methanocaldococcus infernus ME chromosome, complete genomehydrogenase accessory protein HypB1e-29129
NC_015216:2213427:223171122317112232364654Methanobacterium sp. AL-21 chromosome, complete genomehydrogenase accessory protein HypB7e-29127
NC_014507:2174500:219304321930432193690648Methanoplanus petrolearius DSM 11571 chromosome, complete genomehydrogenase accessory protein HypB4e-28124
NC_008595:2687245:271563127156312716002372Mycobacterium avium 104, complete genomehydrogenase accessory protein HypB2e-27122
NC_013665:2495234:252029325202932520943651Methanocella paludicola SANAE, complete genomeputative hydrogenase nickel incorporation protein HypB2e-26119
NC_009712:2362218:237646023764602377107648Candidatus Methanoregula boonei 6A8, complete genomehydrogenase accessory protein HypB2e-24112