Pre_GI: BLASTP Hits

Some Help

Query: NC_010001:1806000:1813126 Clostridium phytofermentans ISDg, complete genome

Start: 1813126, End: 1814313, Length: 1188

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012914:5194791:5200295520029552014971203Paenibacillus sp. JDR-2, complete genomeprotein of unknown function DUF3477e-90331
NC_008278:6885254:6912487691248769137821296Frankia alni ACN14a, complete genomePutative integral membrane protein (partial match)1e-75283
NC_003888:7028165:703279870327987033637840Streptomyces coelicolor A3(2), complete genomeintegral membrane protein2e-67256
NC_016582:11380000:113921971139219711393024828Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegral membrane protein8e-67254
NC_014618:57707:616236162362408786Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein1e-60233
NC_008699:1673181:169972216997221700594873Nocardioides sp. JS614, complete genomeprotein of unknown function DUF3472e-60233
NC_007973:3240866:325854232585423259324783Ralstonia metallidurans CH34 chromosome 1, complete sequenceprotein of unknown function DUF3476e-54211
NC_011000:2732330:275898527589852759767783Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein3e-52206
NC_012914:5194791:519947651994765200273798Paenibacillus sp. JDR-2, complete genomeprotein of unknown function DUF3476e-40165
NC_015656:1830220:184099718409971841866870Frankia symbiont of Datisca glomerata chromosome, complete genomehypothetical protein2e-39163
NC_011761:2067695:207698720769872077781795Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein2e-37156
NC_020157:36234:416424164242385744Anabaena cylindrica PCC 7122 plasmid pANACY.02, complete sequenceprotein of unknown function DUF3478e-37154
NC_004578:6334735:634550563455056346263759Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-35149
NC_015850:1850741:185752818575281858319792Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein3e-34146
NC_010943:2091199:210784721078472108611765Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane protein9e-33141
NC_021172:169215:179408179408180229822Hyphomicrobium denitrificans 1NES1, complete genomehypothetical protein4e-31135
NC_012969:2476318:249696624969662497724759Methylovorus glucosetrophus SIP3-4 chromosome, complete genomehypothetical protein1e-27124
NC_011000:2732330:276026527602652761023759Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein3e-27122
NC_007973:3240866:325981332598133260571759Ralstonia metallidurans CH34 chromosome 1, complete sequenceprotein of unknown function DUF3479e-27121
NC_007794:262402:270703270703271512810Novosphingobium aromaticivorans DSM 12444, complete genomehypothetical protein2e-26120
NC_016582:11380000:113931901139319011394092903Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegral membrane protein2e-26120
NC_010678:900389:922432922432923190759Ralstonia pickettii 12J chromosome 2, complete sequenceprotein of unknown function DUF3472e-25116
NC_012857:41946:639896398964747759Ralstonia pickettii 12D chromosome 2, complete genomeprotein of unknown function DUF3472e-25116
NC_015376:662844:669576669576670352777Burkholderia gladioli BSR3 chromosome chromosome 2, completehypothetical protein4e-23109
NC_015656:1830220:184657018465701847358789Frankia symbiont of Datisca glomerata chromosome, complete genomehypothetical protein8e-2098.6
NC_013283:113660:126712672034768Cronobacter turicensis plasmid pCTU1, complete sequencehypothetical protein3e-1996.7
NC_007973:3240866:325935432593543259803450Ralstonia metallidurans CH34 chromosome 1, complete sequenceconserved hypothetical signal peptide protein2e-0963.5
NC_011000:2732330:275979627597962760248453Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein1e-0861.2