Pre_GI: BLASTP Hits

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Query: NC_010001:1745089:1763676 Clostridium phytofermentans ISDg, complete genome

Start: 1763676, End: 1764362, Length: 687

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014328:4316008:432415343241534324899747Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative microcompartment shellprotein3e-24112
NC_014328:1286407:129488112948811295627747Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative microcompartment shellprotein3e-24112
NC_004557:1553000:155794115579411558630690Clostridium tetani E88, complete genomecarbon dioxide concentrating mechanism protein ccmK homolog2e-22105
NC_012658:2295536:230715823071582307961804Clostridium botulinum Ba4 str. 657 chromosome, complete genomemicrocompartments family protein2e-2099.4
NC_010723:1465097:148270914827091483467759Clostridium botulinum E3 str. Alaska E43, complete genomebacterial microcompartments family protein3e-1892
NC_010674:1496500:151249615124961513254759Clostridium botulinum B str. Eklund 17B, complete genomebacterial microcompartments family protein2e-1789.4
NC_016584:5625975:563232356323235632955633Desulfosporosinus orientis DSM 765 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein2e-1685.9
NC_009633:3933941:394262139426213943220600Alkaliphilus metalliredigens QYMF chromosome, complete genomemicrocompartments protein9e-1683.6
NC_009698:2171151:217850121785012179298798Clostridium botulinum A str. Hall chromosome, complete genomemicrocompartments family protein4e-1478.2
NC_009697:2173000:217828221782822179079798Clostridium botulinum A str. ATCC 19397 chromosome, completemicrocompartments family protein4e-1478.2
NC_009495:2244774:224964022496402250437798Clostridium botulinum A str. ATCC 3502 chromosome, complete genomepropanediol/ethanolamine utilization protein4e-1478.2
NC_012563:2384500:239304423930442393841798Clostridium botulinum A2 str. Kyoto, complete genomebacterial microcompartments family protein4e-1478.2
NC_017297:2288000:229888722988872299771885Clostridium botulinum F str. 230613 chromosome, complete genomebacterial microcompartments family protein5e-1374.7
NC_009699:2287893:229877522987752299659885Clostridium botulinum F str. Langeland chromosome, complete genomecarbon dioxide concentrating mechanism protein CcmK-like protein5e-1374.7
NC_009922:2556033:256607825660782566818741Alkaliphilus oremlandii OhILAs, complete genomemicrocompartments protein2e-1168.9
NC_016584:1998000:202628320262832026615333Desulfosporosinus orientis DSM 765 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein2e-1065.9
NC_016584:1714507:171854317185431718875333Desulfosporosinus orientis DSM 765 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein4e-1065.1
NC_018515:1663912:167198016719801672312333Desulfosporosinus meridiei DSM 13257 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein4e-1064.7
NC_013517:1055854:112352411235241123799276Sebaldella termitidis ATCC 33386, complete genomemicrocompartments protein7e-1064.3
NC_013517:1055854:112546311254631125756294Sebaldella termitidis ATCC 33386, complete genomemicrocompartments protein1e-0963.5
NC_013192:63111:837278372784002276Leptotrichia buccalis DSM 1135, complete genomemicrocompartments protein1e-0963.5
NC_013192:63111:815288152881833306Leptotrichia buccalis DSM 1135, complete genomemicrocompartments protein1e-0963.2
NC_013192:63111:833848338483659276Leptotrichia buccalis DSM 1135, complete genomemicrocompartments protein2e-0962.8
NC_014019:3543389:355222235522223552515294Bacillus megaterium QM B1551 chromosome, complete genomeethanolamine utilization protein EutM5e-0961.2
NC_014654:1113116:112459411245941124899306Halanaerobium sp. 'sapolanicus' chromosome, complete genomemicrocompartments protein9e-0960.5
NC_007907:456164:472491472491472769279Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0860.1
NC_013517:1055854:112283711228371123112276Sebaldella termitidis ATCC 33386, complete genomemicrocompartments protein1e-0860.1
NC_009633:286677:299934299934300218285Alkaliphilus metalliredigens QYMF chromosome, complete genomemicrocompartments protein2e-0859.7
NC_010001:1745089:176664817666481766932285Clostridium phytofermentans ISDg, complete genomemicrocompartments protein1e-0859.7
NC_009633:3933941:394007839400783940377300Alkaliphilus metalliredigens QYMF chromosome, complete genomemicrocompartments protein1e-0859.7
NC_015275:4493500:449848144984814498771291Clostridium lentocellum DSM 5427 chromosome, complete genomemicrocompartments protein1e-0859.7
NC_007907:456164:472172472172472462291Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0859.3
NC_012491:5914500:593835159383515938638288Brevibacillus brevis NBRC 100599, complete genomehypothetical protein3e-0858.9
NC_014328:1286407:129793312979331298223291Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative microcompartment protein3e-0858.9
NC_014328:4316008:432155743215574321847291Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative microcompartment protein3e-0858.9
NC_010001:1745089:175168417516841751974291Clostridium phytofermentans ISDg, complete genomemicrocompartments protein4e-0858.5
NC_009922:2556033:256346325634632563759297Alkaliphilus oremlandii OhILAs, complete genomemicrocompartments protein3e-0858.5
NC_013315:2059007:207238620723862072673288Clostridium difficile CD196 chromosome, complete genomeethanolamine/propanediol utilization protein3e-0858.5
NC_017179:2067015:208039420803942080681288Clostridium difficile BI1, complete genomeethanolamine/propanediol utilization protein3e-0858.5
NC_010723:1465097:148577314857731486063291Clostridium botulinum E3 str. Alaska E43, complete genomebacterial microcompartments family protein5e-0858.2
NC_012563:2384500:239039723903972390687291Clostridium botulinum A2 str. Kyoto, complete genomebacterial microcompartments family protein4e-0858.2
NC_009495:2244774:224699322469932247283291Clostridium botulinum A str. ATCC 3502 chromosome, complete genomemicrocompartments family protein4e-0858.2
NC_009697:2173000:217563521756352175925291Clostridium botulinum A str. ATCC 19397 chromosome, completemicrocompartments family protein4e-0858.2
NC_009698:2171151:217585421758542176144291Clostridium botulinum A str. Hall chromosome, complete genomemicrocompartments family protein4e-0858.2
NC_009699:2287893:229612722961272296417291Clostridium botulinum F str. Langeland chromosome, complete genomemicrocompartments family protein4e-0858.2
NC_012658:2295536:230451123045112304801291Clostridium botulinum Ba4 str. 657 chromosome, complete genomemicrocompartments family protein4e-0858.2
NC_017297:2288000:229623922962392296529291Clostridium botulinum F str. 230613 chromosome, complete genomebacterial microcompartments family protein4e-0858.2
NC_014614:284005:298729298729299022294Clostridium sticklandii, complete genomeputative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein6e-0857.8
NC_009706:830461:843677843677843955279Clostridium kluyveri DSM 555 chromosome, complete genomemicrocompartment shellprotein6e-0857.8
NC_010674:1496500:151556015155601515850291Clostridium botulinum B str. Eklund 17B, complete genomepropanediol utilization protein PduA5e-0857.8
NC_014328:1286407:129829812982981298594297Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative microcompartment protein5e-0857.8
NC_014328:4316008:432118643211864321482297Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative microcompartment protein5e-0857.8
NC_011837:830436:843565843565843930366Clostridium kluyveri NBRC 12016, complete genomehypothetical protein8e-0857.4
NC_008261:1048515:106245710624571062747291Clostridium perfringens ATCC 13124, complete genomeethanolamine utilization protein EutM7e-0857.4
NC_003366:1091766:110572111057211106011291Clostridium perfringens str. 13, complete genomepropanediol utilization protein7e-0857.4
NC_009253:1381401:139119213911921391479288Desulfotomaculum reducens MI-1 chromosome, complete genomemicrocompartments protein7e-0857.4
NC_016584:5625975:562987456298745630164291Desulfosporosinus orientis DSM 765 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein3e-0755.5
NC_019970:2080419:209413520941352094410276Thermoanaerobacterium thermosaccharolyticum M0795, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein6e-0754.3
NC_008497:1575884:157969115796911579969279Lactobacillus brevis ATCC 367, complete genomePropanediol utilization protein1e-0653.5
NC_008319:1727686:174459617445961745027432Synechococcus sp. CC9311, complete genomepossible carbon dioxide concentrating mechanism protein CcmK2e-0652.8
NC_007520:903799:923593923593923901309Thiomicrospira crunogena XCL-2, complete genomemicrocompartments protein3e-0652