Pre_GI: BLASTP Hits

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Query: NC_010001:1702350:1704206 Clostridium phytofermentans ISDg, complete genome

Start: 1704206, End: 1704727, Length: 522

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010520:3674883:368638136863813686902522Clostridium botulinum A3 str. Loch Maree, complete genomeriboflavin biosynthesis protein RibD C- domain protein5e-85313
NC_012658:3678000:368092136809213681442522Clostridium botulinum Ba4 str. 657 chromosome, complete genomeriboflavin biosynthesis protein RibD C- domain-containing protein3e-84310
NC_008525:1493317:150049515004951501028534Pediococcus pentosaceus ATCC 25745, complete genomeDihydrofolate reductase1e-1892.8
NC_015930:821342:831948831948832469522Lactococcus garvieae ATCC 49156, complete genomehypothetical protein2e-1892
NC_016940:3600749:362739336273933627923531Saprospira grandis str. Lewin chromosome, complete genomedihydrofolate reductase8e-1889.7
NC_008255:1500067:150999815099981510528531Cytophaga hutchinsonii ATCC 33406, complete genomedihydrofolate reductase family protein6e-1786.7
NC_014976:2175667:218302321830232183589567Bacillus subtilis BSn5 chromosome, complete genomeputative oxidoreductase8e-1786.3
NC_007604:1875268:189234618923461892930585Synechococcus elongatus PCC 7942, complete genomehypothetical protein2e-1685.5
NC_006576:2423250:242412124241212424705585Synechococcus elongatus PCC 6301, complete genomehypothetical protein2e-1685.5
NC_000964:4164683:418563241856324186198567Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-1685.1
NC_013406:781308:796880796880797437558Paenibacillus sp. Y412MC10 chromosome, complete genomebifunctional deaminase-reductase domain-containing protein2e-1685.1
NC_020244:4020315:402831040283104028876567Bacillus subtilis XF-1, complete genomeputative oxidoreductase4e-1684
NC_014655:424486:451401451401451946546Leadbetterella byssophila DSM 17132 chromosome, complete genomebifunctional deaminase-reductase domain protein5e-1683.6
NC_020272:599064:615323615323615853531Bacillus amyloliquefaciens IT-45, complete genomedihydrofolate reductase family protein1e-1582.8
NC_008027:4953432:497552049755204976056537Pseudomonas entomophila L48, complete genomehypothetical protein6e-1580.1
NC_014622:653599:658806658806659345540Paenibacillus polymyxa SC2 chromosome, complete genomebifunctional deaminase-reductase domain-containing protein1e-1479
NC_008536:33776:383203832038874555Solibacter usitatus Ellin6076, complete genomebifunctional deaminase-reductase domain protein3e-1477.8
NC_008255:3331613:333161333316133332158546Cytophaga hutchinsonii ATCC 33406, complete genomedihydrofolate reductase6e-1477
NC_020829:1840281:186700618670061867551546Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein1e-1376.3
NC_016641:2225779:223120622312062231748543Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein1e-1375.9
NC_011830:4234392:425093042509304251475546Desulfitobacterium hafniense DCB-2, complete genomebifunctional deaminase-reductase domain protein1e-1375.5
NC_019904:5130458:513478351347835135319537Echinicola vietnamensis DSM 17526 chromosome, complete genomedihydrofolate reductase2e-1375.1
NC_007907:4956500:497695749769574977565609Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-1374.3
NC_014483:562594:567934567934568473540Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein5e-1373.9
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome3e-1168.2
NC_004193:375416:399284399284399871588Oceanobacillus iheyensis HTE831, complete genomehypothetical protein4e-1167.4
NC_009648:3224495:325335032533503253886537Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative bifunctional deaminase-reductase6e-1167
NC_011146:3720658:372891237289123729475564Geobacter bemidjiensis Bem, complete genomebifunctional deaminase-reductase domain protein6e-1166.6
NC_015711:570910:589919589919590470552Myxococcus fulvus HW-1 chromosome, complete genomeriboflavin biosynthesis protein RibD domain-containing protein1e-1065.9
NC_011751:3048490:307361930736193074158540Escherichia coli UMN026 chromosome, complete genomeputative Bifunctional deaminase-reductase2e-1065.1
NC_019904:1616742:163458716345871635147561Echinicola vietnamensis DSM 17526 chromosome, complete genomedihydrofolate reductase2e-1064.7
NC_015379:3175500:318930931893093189845537Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative bifunctional deaminase-reductase3e-1064.3
NC_013169:513327:523889523889524479591Kytococcus sedentarius DSM 20547, complete genomedihydrofolate reductase4e-1064.3
NC_016771:2933886:295508729550872955632546Bacillus cereus NC7401, complete genomepyrimidine reductase5e-1063.9
NC_011658:2978000:299921029992102999755546Bacillus cereus AH187 chromosome, complete genomeriboflavin biosynthesis protein RibD C- domain-containing protein5e-1063.9
NC_013061:2775623:278462427846242785202579Pedobacter heparinus DSM 2366, complete genomebifunctional deaminase-reductase domain protein1e-0962.8
NC_013521:1619394:162606116260611626612552Sanguibacter keddieii DSM 10542, complete genomedihydrofolate reductase1e-0962.8
NC_014008:3500000:350030635003063500830525Coraliomargarita akajimensis DSM 45221 chromosome, complete genomebifunctional deaminase-reductase domain protein1e-0962.4
NC_016830:3697173:371699237169923717528537Pseudomonas fluorescens F113 chromosome, complete genomedihydrofolate reductase3e-0961.2
NC_018750:3741581:376190037619003762442543Streptomyces venezuelae ATCC 10712, complete genomeDihydrofolate reductase4e-0960.8
NC_015957:8845274:885717488571748857767594Streptomyces violaceusniger Tu 4113 chromosome, complete genomebifunctional deaminase-reductase domain-containing protein5e-0960.5
NC_016514:1183356:120053712005371201076540Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YwjB9e-0959.7
NC_018750:5293829:529560652956065296187582Streptomyces venezuelae ATCC 10712, complete genomeDihydrofolate reductase1e-0859.7
NC_008313:1991000:199836819983681998904537Ralstonia eutropha H16 chromosome 1, complete sequencedihydrofolate reductase1e-0859.3
NC_008752:2334511:235544823554482355990543Acidovorax avenae subsp. citrulli AAC00-1, complete genomebifunctional deaminase-reductase domain protein2e-0858.2
NC_014815:3790050:380685938068593807434576Micromonospora sp. L5 chromosome, complete genomebifunctional deaminase-reductase domain protein6e-0857
NC_016609:4331359:435009643500964350716621Niastella koreensis GR20-10 chromosome, complete genomebifunctional deaminase-reductase domain-containing protein7e-0856.6
NC_019904:5130458:514303851430385143595558Echinicola vietnamensis DSM 17526 chromosome, complete genomedihydrofolate reductase7e-0856.6
NC_013235:2129982:213391921339192134494576Nakamurella multipartita DSM 44233, complete genomedihydrofolate reductase family protein8e-0856.6
NC_014973:2425994:244536924453692445920552Geobacter sp. M18 chromosome, complete genomebifunctional deaminase-reductase domain-containing protein9e-0856.6
NC_013521:1619394:163905916390591639613555Sanguibacter keddieii DSM 10542, complete genomedihydrofolate reductase9e-0856.2
NC_013959:1059004:109404110940411094631591Sideroxydans lithotrophicus ES-1 chromosome, complete genomebifunctional deaminase-reductase domain protein2e-0755.5
NC_014391:3103000:312022631202263120807582Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein5e-0753.9
NC_011832:1122268:113891711389171139480564Candidatus Methanosphaerula palustris E1-9c, complete genomeriboflavin biosynthesis protein RibD8e-0753.1
NC_013406:3672857:371669337166933717268576Paenibacillus sp. Y412MC10 chromosome, complete genomebifunctional deaminase-reductase domain-containing protein9e-0753.1
NC_013093:3996197:401394140139414014522582Actinosynnema mirum DSM 43827, complete genomehypothetical protein6e-0650.1
NC_013037:1587673:159115315911531591806654Dyadobacter fermentans DSM 18053, complete genomebifunctional deaminase-reductase domain protein6e-0650.1
NC_009338:3410349:342734734273473427946600Mycobacterium gilvum PYR-GCK chromosome, complete genomedeaminase-reductase domain-containing protein7e-0650.1