Pre_GI: BLASTP Hits

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Query: NC_009975:1203372:1222801 Methanococcus maripaludis C6, complete genome

Start: 1222801, End: 1223037, Length: 237

Host Lineage: Methanococcus maripaludis; Methanococcus; Methanococcaceae; Methanococcales; Euryarchaeota; Archaea

General Information: This strain was isolated from intertidal sediments. Methanococcus maripaludis is a rapid growing hydrogenotrophic methanoarchaeon common in salt marshes, marine and estuarine environments in the Southeastern U.S.A. Methanococcus maripaludis is an obligately anaerobic, mesophilic, methane-producing archaeon. Growth on hydrogen and carbon dioxide results in the production of methane as a waste product. M. maripaludis stands out among methanogenic archaea as an ideal model species because of fast reproducible growth and effective genetic tools.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009637:602079:607399607399607635237Methanococcus maripaludis C7 chromosome, complete genomeDNA-directed RNA polymerase subunit H4e-36149
NC_015847:1418036:142335814233581423594237Methanococcus maripaludis XI chromosome, complete genomeDNA-directed RNA polymerase subunit H1e-34144
NC_005791:1334880:133903513390351339271237Methanococcus maripaludis S2, complete genomeRNA polymerase H/23 kD subunit1e-34144
NC_009634:714715:719161719161719397237Methanococcus vannielii SB chromosome, complete genomeDNA-directed RNA polymerase subunit H3e-25113
NC_015636:468500:487791487791488027237Methanothermococcus okinawensis IH1 chromosome, complete genomeDNA-directed RNA polymerase subunit H2e-24110
NC_015562:1571928:157881915788191579052234Methanotorris igneus Kol 5 chromosome, complete genomeDNA-directed RNA polymerase subunit H2e-23107
NC_009635:800000:819679819679819915237Methanococcus aeolicus Nankai-3 chromosome, complete genomeDNA-directed RNA polymerase subunit H9e-2199
NC_013407:1527454:154708515470851547339255Methanocaldococcus vulcanius M7, complete genomeRNA polymerase Rpb52e-1994
NC_013156:1182609:118797411879741188210237Methanocaldococcus fervens AG86, complete genomeRNA polymerase Rpb54e-1890.1
NC_013887:1601730:160832316083231608559237Methanocaldococcus sp. FS406-22 chromosome, complete genomeRNA polymerase Rpb54e-1889.7
NC_000909:963984:970761970761970997237Methanocaldococcus jannaschii DSM 2661, complete genomeDNA-directed RNA polymerase, subunit H (rpoH)8e-1889
NC_015676:546895:549885549885550121237Methanosalsum zhilinae DSM 4017 chromosome, complete genomeRNA polymerase Rpb52e-1684.3
NC_018876:996855:100908210090821009324243Methanolobus psychrophilus R15 chromosome, complete genomeDNA-directed RNA polymerase, subunit H6e-1682.8
NC_014122:549932:582287582287582523237Methanocaldococcus infernus ME chromosome, complete genomeRNA polymerase Rpb52e-1581.3
NC_007955:1254051:127111012711101271346237Methanococcoides burtonii DSM 6242, complete genomeRNA polymerase subunit, RPB56e-1579.7
NC_007355:4740161:475917447591744759410237Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceDNA-directed RNA polymerase subunit H6e-1579.3
NC_003901:2685716:270256127025612702884324Methanosarcina mazei Go1, complete genomeDNA-directed RNA polymerase subunit H3e-1477
NC_020389:2288541:230747423074742307797324Methanosarcina mazei Tuc01, complete genomeDNA-directed RNA polymerase subunit H3e-1477
NC_019977:1897556:191027419102741910510237Methanomethylovorans hollandica DSM 15978, complete genomeDNA-directed RNA polymerase, subunit H, RpoH/RPB51e-1375.1
NC_000917:1693500:169639316963931696623231Archaeoglobus fulgidus DSM 4304, complete genomeDNA-directed RNA polymerase, subunit H (rpoH)1e-1375.1
NC_003552:1492500:150939815093981509634237Methanosarcina acetivorans C2A, complete genomeDNA-directed RNA polymerase, subunit H2e-1374.3
NC_012883:360348:371434371434371682249Thermococcus sibiricus MM 739, complete genomeDNA-directed RNA polymerase subunit H3e-1373.9
NC_014253:729996:747238747238747474237Methanohalobium evestigatum Z-7303 chromosome, complete genomeRNA polymerase Rpb53e-1373.9
NC_007181:543000:554034554034554288255Sulfolobus acidocaldarius DSM 639, complete genomeDNA-directed RNA polymerase, subunit H1e-1271.6
NC_014471:1153438:117060911706091170869261Ignisphaera aggregans DSM 17230 chromosome, complete genomeDNA-directed RNA polymerase, subunit H5e-1270.1
NC_009033:791515:798567798567798842276Staphylothermus marinus F1, complete genomeRNA polymerase subunit, RPB59e-1268.9
NC_007681:1532500:154980415498041550037234Methanosphaera stadtmanae DSM 3091, complete genomeRpoH1e-1168.6
NC_008698:235688:255320255320255562243Thermofilum pendens Hrk 5, complete genomeRNA polymerase subunit, RPB52e-1168.2
NC_014537:1146000:115073011507301151002273Vulcanisaeta distributa DSM 14429 chromosome, complete genomeRNA polymerase Rpb52e-1167.8
NC_015320:1159613:119575811957581195991234Archaeoglobus veneficus SNP6 chromosome, complete genomeDNA-directed RNA polymerase subunit H5e-1166.6
NC_013849:651158:670197670197670427231Ferroglobus placidus DSM 10642 chromosome, complete genomeRNA polymerase Rpb55e-1166.6
NC_014658:620819:638354638354638593240Methanothermus fervidus DSM 2088 chromosome, complete genomeDNA-directed RNA polymerase, subunit h7e-1165.9
NC_003106:282320:295283295283295582300Sulfolobus tokodaii str. 7, complete genomehypothetical DNA-directed RNA polymerase subunit H2e-1064.7
NC_009376:2074325:207432520743252074552228Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeDNA-directed RNA polymerase subunit H2e-1064.3
NC_015931:134601:189031189031189348318Pyrolobus fumarii 1A, complete genomeRNA polymerase Rpb52e-1064.3
NC_014804:189368:195828195828196076249Thermococcus barophilus MP chromosome, complete genomeDNA-directed RNA polymerase subunit H3e-1063.9
NC_003413:1448377:146301314630131463261249Pyrococcus furiosus DSM 3638, complete genomeDNA-directed RNA polymerase subunit H3e-1063.9
NC_015435:21736:283342833428585252Metallosphaera cuprina Ar-4 chromosome, complete genomeDNA-directed RNA polymerase subunit H5e-1063.2
NC_009073:1934715:193652819365281936755228Pyrobaculum calidifontis JCM 11548, complete genomeRNA polymerase subunit, RPB56e-1062.8
NC_015518:685885:703356703356703610255Acidianus hospitalis W1 chromosome, complete genomeRNA polymerase subunit H6e-1062.8
NC_015574:254731:262243262243262476234Methanobacterium sp. SWAN-1 chromosome, complete genomeDNA-directed RNA polymerase subunit H1e-0961.6
NC_009440:21947:285422854228793252Metallosphaera sedula DSM 5348 chromosome, complete genomeDNA-directed RNA polymerase subunit H1e-0961.6
NC_019791:1454764:146323614632361463490255Caldisphaera lagunensis DSM 15908 chromosome, complete genomeDNA-directed RNA polymerase, subunit H, RpoH/RPB52e-0961.2
NC_013790:2337000:234968723496872349935249Methanobrevibacter ruminantium M1 chromosome, complete genomeDNA-directed RNA polymerase subunit H RpoH2e-0961.2
NC_015315:1584890:158672015867201586959240Thermoproteus uzoniensis 768-20 chromosome, complete genomeDNA-directed RNA polymerase subunit H3e-0960.8
NC_016070:1448488:147175914717591472058300Thermoproteus tenax Kra 1, complete genomeDNA-directed RNA polymerase subunit H3e-0960.5
NC_000961:1366000:137933213793321379580249Pyrococcus horikoshii OT3, complete genomeDNA-directed RNA polymerase subunit H4e-0960.1
NC_000868:571500:579272579272579520249Pyrococcus abyssi GE5, complete genomeDNA-directed RNA polymerase subunit H5e-0960.1
NC_002578:377783:413685413685413960276Thermoplasma acidophilum DSM 1728, complete genomeDNA-directed RNA polymerase subunit H5e-0959.7
NC_015216:2422758:244222624422262442459234Methanobacterium sp. AL-21 chromosome, complete genomeDNA-directed RNA polymerase subunit H5e-0959.7
NC_015474:105075:118792118792119040249Pyrococcus sp. NA2 chromosome, complete genomeDNA-directed RNA polymerase subunit H2e-0858.2
NC_014374:1072218:116463111646311164837207Acidilobus saccharovorans 345-15 chromosome, complete genomeDNA-directed RNA polymerase subunit H4e-0856.6
NC_012589:1837985:184057618405761840830255Sulfolobus islandicus L.S.2.15, complete genomeRNA polymerase Rpb51e-0755.5
NC_012588:1747963:175055417505541750808255Sulfolobus islandicus M.14.25 chromosome, complete genomeDNA-directed RNA polymerase subunit H1e-0755.5
NC_012632:1851991:185458218545821854836255Sulfolobus islandicus M.16.27 chromosome, complete genomeDNA-directed RNA polymerase subunit H1e-0755.5
NC_012726:1751713:175481417548141755068255Sulfolobus islandicus M.16.4 chromosome, complete genomeDNA-directed RNA polymerase subunit H1e-0755.5
NC_013769:1841908:184784518478451848099255Sulfolobus islandicus L.D.8.5 chromosome, complete genomeRNA polymerase subunit, RPB51e-0755.5
NC_017275:1775794:177889517788951779149255Sulfolobus islandicus HVE10/4 chromosome, complete genomeRNA polymerase Rpb51e-0755.5
NC_017276:1631819:163441016344101634664255Sulfolobus islandicus REY15A chromosome, complete genomeRNA polymerase Rpb51e-0755.5
NC_000916:952663:954546954546954779234Methanothermobacter thermautotrophicus str. Delta H, completeDNA-dependent RNA polymerase, subunit H1e-0755.5
NC_017954:471000:471005471005471280276Thermogladius cellulolyticus 1633 chromosome, complete genomeDNA-directed RNA polymerase subunit H1e-0755.1
NC_002754:181819:196577196577196831255Sulfolobus solfataricus P2, complete genomeDNA-directed RNA polymerase, subunit H (rpoH)1e-0755.1
NC_014408:1314382:131785113178511318084234Methanothermobacter marburgensis str. Marburg chromosome, completeDNA-directed RNA polymerase, subunit H2e-0754.7
NC_002689:1228061:124147812414781241741264Thermoplasma volcanium GSS1, complete genomeDNA-directed RNA polymerase subunit H2e-0754.3