Pre_GI: BLASTP Hits

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Query: NC_009975:1203372:1215416 Methanococcus maripaludis C6, complete genome

Start: 1215416, End: 1216576, Length: 1161

Host Lineage: Methanococcus maripaludis; Methanococcus; Methanococcaceae; Methanococcales; Euryarchaeota; Archaea

General Information: This strain was isolated from intertidal sediments. Methanococcus maripaludis is a rapid growing hydrogenotrophic methanoarchaeon common in salt marshes, marine and estuarine environments in the Southeastern U.S.A. Methanococcus maripaludis is an obligately anaerobic, mesophilic, methane-producing archaeon. Growth on hydrogen and carbon dioxide results in the production of methane as a waste product. M. maripaludis stands out among methanogenic archaea as an ideal model species because of fast reproducible growth and effective genetic tools.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009637:602079:6138626138626150221161Methanococcus maripaludis C7 chromosome, complete genomeDNA-directed RNA polymerase subunit A''0710
NC_009135:168500:1816101816101827701161Methanococcus maripaludis C5, complete genomeDNA-directed RNA polymerase, subunit A''0704
NC_015847:1418036:1429820142982014309801161Methanococcus maripaludis XI chromosome, complete genomeDNA-directed RNA polymerase subunit A''0696
NC_005791:1334880:1345497134549713466571161Methanococcus maripaludis S2, complete genomeDNA-directed RNA polymerase subunit A0696
NC_009634:714715:7256337256337267931161Methanococcus vannielii SB chromosome, complete genomeDNA-directed RNA polymerase subunit A''0639
NC_014222:1156648:1172599117259911737621164Methanococcus voltae A3 chromosome, complete genomeDNA-directed RNA polymerase, subunit A''7e-159560
NC_009635:800000:8114418114418126341194Methanococcus aeolicus Nankai-3 chromosome, complete genomeDNA-directed RNA polymerase subunit A''1e-140499
NC_015636:468500:4784074784074795941188Methanothermococcus okinawensis IH1 chromosome, complete genomeDNA-directed RNA polymerase subunit A''1e-137489
NC_013887:1601730:1614842161484216160051164Methanocaldococcus sp. FS406-22 chromosome, complete genomeDNA-directed RNA polymerase, subunit A''1e-127456
NC_013156:1182609:1194491119449111956541164Methanocaldococcus fervens AG86, complete genomeDNA-directed RNA polymerase, subunit A''2e-125449
NC_015562:1571928:1585407158540715880012595Methanotorris igneus Kol 5 chromosome, complete genomeDNA-directed RNA polymerase subunit A''3e-125448
NC_000909:963984:9787069787069812852580Methanocaldococcus jannaschii DSM 2661, complete genomeDNA-directed RNA polymerase subunit A4e-119428
NC_013407:1527454:1536566153656615389652400Methanocaldococcus vulcanius M7, complete genomeRNA polymerase Rpb1 domain 57e-113407
NC_014122:549932:5737185737185761862469Methanocaldococcus infernus ME chromosome, complete genomeRNA polymerase Rpb1 domain 51e-112407
NC_014658:620819:6311776311776323341158Methanothermus fervidus DSM 2088 chromosome, complete genomeDNA-directed RNA polymerase, subunit a'3e-100365
NC_019977:1897556:1916715191671519178571143Methanomethylovorans hollandica DSM 15978, complete genomeDNA-directed RNA polymerase, subunit A''7e-100364
NC_018876:996855:1015525101552510166671143Methanolobus psychrophilus R15 chromosome, complete genomeDNA-directed RNA polymerase subunit A''2e-98358
NC_000868:571500:5856245856245868171194Pyrococcus abyssi GE5, complete genomeDNA-directed RNA polymerase subunit A2e-96352
NC_013849:651158:6630996630996642291131Ferroglobus placidus DSM 10642 chromosome, complete genomeDNA-directed RNA polymerase, subunit A''3e-95348
NC_000961:1366000:1372029137202913732221194Pyrococcus horikoshii OT3, complete genomeDNA-directed RNA polymerase subunit A5e-95348
NC_015474:105075:1114981114981126911194Pyrococcus sp. NA2 chromosome, complete genomeDNA-directed RNA polymerase subunit A'5e-95348
NC_003413:1448377:1455699145569914568921194Pyrococcus furiosus DSM 3638, complete genomeDNA-directed RNA polymerase subunit A8e-94344
NC_000917:1693500:1702621170262117037631143Archaeoglobus fulgidus DSM 4304, complete genomeDNA-directed RNA polymerase subunit A1e-93343
NC_015676:546895:5563865563865575431158Methanosalsum zhilinae DSM 4017 chromosome, complete genomeDNA-directed RNA polymerase subunit A''1e-93343
NC_020389:2288541:2299951229995123011741224Methanosarcina mazei Tuc01, complete genomeDNA-directed RNA polymerase subunit A''4e-93342
NC_003901:2685716:2695038269503826962641227Methanosarcina mazei Go1, complete genomeDNA-directed RNA polymerase subunit A''4e-93342
NC_014408:1314382:1325031132503113263861356Methanothermobacter marburgensis str. Marburg chromosome, completeDNA-directed RNA polymerase, subunit A''6e-93341
NC_000916:952663:9608749608749622291356Methanothermobacter thermautotrophicus str. Delta H, completeDNA-directed RNA polymerase subunit A1e-92340
NC_014804:189368:2021872021872033711185Thermococcus barophilus MP chromosome, complete genomeDNA-directed RNA polymerase subunit A''2e-92339
NC_015574:254731:2687582687582699301173Methanobacterium sp. SWAN-1 chromosome, complete genomeDNA-directed RNA polymerase subunit A''4e-92338
NC_012883:360348:3777793777793789721194Thermococcus sibiricus MM 739, complete genomeDNA-directed RNA polymerase subunit A''9e-92337
NC_007355:4740161:4751603475160347528831281Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceDNA-directed RNA polymerase subunit A2e-91335
NC_003552:1492500:1501905150190515030981194Methanosarcina acetivorans C2A, complete genomeDNA-directed RNA polymerase subunit A4e-91335
NC_007955:1254051:1263609126360912647691161Methanococcoides burtonii DSM 6242, complete genomeDNA-directed RNA polymerase, subunit A''3e-90332
NC_015320:1159613:1188621118862111897511131Archaeoglobus veneficus SNP6 chromosome, complete genomeDNA-directed RNA polymerase subunit A''4e-89328
NC_013926:1037681:1043551104355110451011551Aciduliprofundum boonei T469 chromosome, complete genomeDNA-directed RNA polymerase, subunit A''1e-88327
NC_003106:282320:2880782880782892741197Sulfolobus tokodaii str. 7, complete genomeDNA-directed RNA polymerase subunit A2e-88326
NC_015216:2422758:2434835243483524359891155Methanobacterium sp. AL-21 chromosome, complete genomeDNA-directed RNA polymerase subunit A''3e-88325
NC_014253:729996:7398087398087409741167Methanohalobium evestigatum Z-7303 chromosome, complete genomeDNA-directed RNA polymerase subunit A''5e-88325
NC_012589:1837985:1846854184685418480321179Sulfolobus islandicus L.S.2.15, complete genomeDNA-directed RNA polymerase, subunit A''5e-88325
NC_012588:1747963:1756832175683217580101179Sulfolobus islandicus M.14.25 chromosome, complete genomeDNA-directed RNA polymerase subunit A''5e-88325
NC_012632:1851991:1860860186086018620381179Sulfolobus islandicus M.16.27 chromosome, complete genomeDNA-directed RNA polymerase subunit A''5e-88325
NC_012726:1751713:1761092176109217622701179Sulfolobus islandicus M.16.4 chromosome, complete genomeDNA-directed RNA polymerase subunit A''5e-88325
NC_013769:1841908:1854123185412318553011179Sulfolobus islandicus L.D.8.5 chromosome, complete genomeDNA-directed RNA polymerase subunit A''5e-88325
NC_017275:1775794:1785173178517317863511179Sulfolobus islandicus HVE10/4 chromosome, complete genomeDNA-directed RNA polymerase subunit A''5e-88325
NC_017276:1631819:1640688164068816418661179Sulfolobus islandicus REY15A chromosome, complete genomeDNA-directed RNA polymerase subunit A''5e-88325
NC_002754:181819:1893721893721905591188Sulfolobus solfataricus P2, complete genomeDNA-directed RNA polymerase subunit A2e-87322
NC_009515:853932:8704018704018716121212Methanobrevibacter smithii ATCC 35061, complete genomeDNA-directed RNA polymerase subunit A''2e-86319
NC_013741:809030:8239548239548250871134Archaeoglobus profundus DSM 5631, complete genomeDNA-directed RNA polymerase, subunit A''3e-86319
NC_019942:1270060:1273705127370512752551551Aciduliprofundum sp. MAR08-339, complete genomeDNA-directed RNA polymerase, subunit A''4e-86318
NC_007681:1532500:1541581154158115427501170Methanosphaera stadtmanae DSM 3091, complete genomeRpoA29e-86317
NC_007181:543000:5468285468285480091182Sulfolobus acidocaldarius DSM 639, complete genomeDNA-directed RNA polymerase subunit A5e-85315
NC_015518:685885:6961606961606973381179Acidianus hospitalis W1 chromosome, complete genomeDNA-directed RNA polymerase subunit A''7e-84311
NC_009440:21947:3482934829360071179Metallosphaera sedula DSM 5348 chromosome, complete genomeDNA-directed RNA polymerase subunit A''9e-82303
NC_005877:284829:2881492881492896751527Picrophilus torridus DSM 9790, complete genomeDNA-directed RNA polymerase subunit A2e-81303
NC_013922:2202889:2202889220288922040881200Natrialba magadii ATCC 43099 chromosome, complete genomeDNA-directed RNA polymerase, subunit A''3e-81302
NC_013743:375459:3783763783763795691194Haloterrigena turkmenica DSM 5511, complete genomeDNA-directed RNA polymerase, subunit A''4e-81301
NC_009033:791515:8049918049918062561266Staphylothermus marinus F1, complete genomeDNA-directed RNA polymerase, subunit A''1e-80300
NC_002689:1228061:1233699123369912352401542Thermoplasma volcanium GSS1, complete genomeDNA-directed RNA polymerase subunit A2e-80299
NC_015435:21736:3462134621357991179Metallosphaera cuprina Ar-4 chromosome, complete genomeDNA-directed RNA polymerase subunit A''3e-80299
NC_014961:1283889:1303707130370713049301224Desulfurococcus mucosus DSM 2162 chromosome, complete genomeDNA-directed RNA polymerase subunit A'3e-80299
NC_019974:192862:1976181976181988141197Natronococcus occultus SP4, complete genomeDNA-directed RNA polymerase, subunit A'4e-80298
NC_017954:471000:4773734773734785841212Thermogladius cellulolyticus 1633 chromosome, complete genomeDNA-directed RNA polymerase subunit A'4e-80298
NC_015931:134601:1955191955191967931275Pyrolobus fumarii 1A, complete genomeDNA-directed RNA polymerase subunit A''1e-79297
NC_011766:1255503:1271922127192212731421221Desulfurococcus kamchatkensis 1221n chromosome, complete genomeDNA-directed RNA polymerase, subunit A''1e-79297
NC_008698:235688:2480502480502492611212Thermofilum pendens Hrk 5, complete genomeDNA-directed RNA polymerase, subunit A''2e-79296
NC_014205:1553530:1570936157093615722011266Staphylothermus hellenicus DSM 12710 chromosome, complete genomeDNA-directed RNA polymerase, subunit A''4e-79295
NC_002578:377783:4201954201954217301536Thermoplasma acidophilum DSM 1728, complete genomeDNA-directed RNA polymerase subunit A1e-78293
NC_014160:1273859:1307138130713813083641227Thermosphaera aggregans DSM 11486 chromosome, complete genomeDNA-directed RNA polymerase subunit A'3e-77288
NC_014471:1153438:1163306116330611644811176Ignisphaera aggregans DSM 17230 chromosome, complete genomeDNA-directed RNA polymerase, subunit A'3e-77288
NC_014537:1146000:1157263115726311584381176Vulcanisaeta distributa DSM 14429 chromosome, complete genomeDNA-directed RNA polymerase subunit A''1e-74280
NC_014374:1072218:1171059117105911723991341Acidilobus saccharovorans 345-15 chromosome, complete genomeDNA-directed RNA polymerase subunit A''1e-73277
NC_019791:1454764:1469684146968414709671284Caldisphaera lagunensis DSM 15908 chromosome, complete genomeDNA-directed RNA polymerase, subunit A''''2e-73276
NC_009073:1934715:1943049194304919441971149Pyrobaculum calidifontis JCM 11548, complete genomeDNA-directed RNA polymerase, subunit A''3e-73275
NC_009376:2074325:2080652208065220817911140Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeDNA-directed RNA polymerase subunit A''1e-72274
NC_016070:1448488:1464527146452714656631137Thermoproteus tenax Kra 1, complete genomeDNA-directed RNA polymerase subunit A''4e-72271
NC_003364:359500:3656203656203667591140Pyrobaculum aerophilum str. IM2, complete genomeDNA-directed RNA polymerase subunit A2e-70266
NC_015315:1584890:1593168159316815943041137Thermoproteus uzoniensis 768-20 chromosome, complete genomeDNA-directed RNA polymerase subunit A''1e-69264
NC_005213:202400:3763973763973775211125Nanoarchaeum equitans Kin4-M, complete genomeDNA-directed RNA polymerase subunit A1e-61237
NC_005213:295994:3763973763973775211125Nanoarchaeum equitans Kin4-M, complete genomeDNA-directed RNA polymerase subunit A1e-61237
NC_013790:2337000:2341639234163923432761638Methanobrevibacter ruminantium M1 chromosome, complete genomeDNA-directed RNA polymerase subunit A'' RpoA21e-56221
NC_010723:223935:2426032426032461363534Clostridium botulinum E3 str. Alaska E43, complete genomeDNA-directed RNA polymerase, beta' subunit8e-1478.6
NC_017351:566717:5813795813795850023624Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeDNA-directed RNA polymerase subunit beta'1e-1274.3
NC_013525:766848:7722237722237764494227Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeDNA-directed RNA polymerase, beta' subunit2e-1273.9
NC_006055:689956:6953006953006990643765Mesoplasma florum L1, complete genomeDNA-directed RNA polymerase beta subunit2e-1273.6
NC_013521:3285423:3308042330804233119233882Sanguibacter keddieii DSM 10542, complete genomeDNA-directed RNA polymerase subunit beta'1e-1171.2
NC_017096:1081904:1101379110137911051703792Caldisericum exile AZM16c01, complete genomeDNA-directed RNA polymerase subunit beta'3e-1169.7
NC_000908:421467:4305804305804344583879Mycoplasma genitalium G37, complete genomeDNA-directed RNA polymerase beta' subunit1e-1067.8
NC_002677:2241065:2269270226927022732203951Mycobacterium leprae TN, complete genomeDNA-directed RNA polymerase beta' subunit2e-1067.4
NC_011896:2240990:2269195226919522731453951Mycobacterium leprae Br4923, complete genomeRNA polymerase subunit beta'2e-1067.4
NC_013171:497499:5070325070325105983567Anaerococcus prevotii DSM 20548, complete genomeDNA-directed RNA polymerase, beta' subunit3e-0963.2
NC_017955:4888990:4916000491600049198993900Modestobacter marinus, complete genomeDNA-directed RNA polymerase subunit beta'5e-0962.4
NC_018664:2357882:2380410238041023839673558Clostridium acidurici 9a chromosome, complete genomeDNA-directed RNA polymerase subunit beta'5e-0962.4
NC_008261:2957354:2980796298079629843323537Clostridium perfringens ATCC 13124, complete genomeDNA-directed RNA polymerase, beta' subunit6e-0962
NC_008262:2598920:2624347262434726278833537Clostridium perfringens SM101, complete genomeDNA-directed RNA polymerase, beta' subunit6e-0962
NC_003366:2731995:2758152275815227616883537Clostridium perfringens str. 13, complete genomeDNA-directed RNA polymerase beta' subunit6e-0962
NC_009922:542500:5503745503745539133540Alkaliphilus oremlandii OhILAs, complete genomeDNA-directed RNA polymerase, beta' subunit6e-0962
NC_012563:3956500:3980705398070539842413537Clostridium botulinum A2 str. Kyoto, complete genomeDNA-directed RNA polymerase, beta' subunit6e-0962
NC_020291:166500:1849321849321884683537Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeDNA-directed RNA polymerase subunit beta'6e-0962
NC_012658:3778822:3803487380348738070233537Clostridium botulinum Ba4 str. 657 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'6e-0962
NC_010516:3759136:3783787378378737873233537Clostridium botulinum B1 str. Okra, complete genomeDNA-directed RNA polymerase, beta' subunit6e-0962
NC_010520:3788702:3813360381336038168963537Clostridium botulinum A3 str. Loch Maree, complete genomeDNA-directed RNA polymerase, beta' subunit6e-0962.4
NC_009495:3688138:3712790371279037163263537Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'6e-0962.4
NC_009698:3553365:3585888358588835894243537Clostridium botulinum A str. Hall chromosome, complete genomeDNA-directed RNA polymerase subunit beta'6e-0962.4
NC_009089:87581:9391893918974033486Clostridium difficile 630, complete genomeDNA-directed RNA polymerase beta' chain6e-0962.4
NC_013316:81969:97667976671011523486Clostridium difficile R20291, complete genomeDNA-directed RNA polymerase beta' chain6e-0962.4
NC_008593:196257:2267872267872303443558Clostridium novyi NT, complete genomeDNA-directed RNA polymerase, beta' subunit6e-0962.4
NC_015425:198315:2314402314402349973558Clostridium botulinum BKT015925 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'6e-0962.4
NC_014393:4482896:4507836450783645113543519Clostridium cellulovorans 743B chromosome, complete genomeDNA-directed RNA polymerase, beta' subunit6e-0962.4
NC_021182:4557608:4581806458180645853333528Clostridium pasteurianum BC1, complete genomeDNA-directed RNA polymerase, beta'' subunit, predominant form6e-0962.4
NC_018750:4688968:4703097470309747069963900Streptomyces venezuelae ATCC 10712, complete genomeDNA-directed RNA polymerase beta subunit6e-0962.4
NC_009617:163466:1833521833521868883537Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'6e-0962.4
NC_014328:4387303:4451245445124544547813537Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'7e-0962
NC_015687:3252233:3276898327689832804463549Clostridium acetobutylicum DSM 1731 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'7e-0962
NC_003030:3251941:3275271327527132788193549Clostridium acetobutylicum ATCC 824, complete genomeDNA-directed RNA polymerase beta' subunit7e-0962
NC_017295:3250451:3274528327452832780763549Clostridium acetobutylicum EA 2018 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'7e-0962
NC_013921:1977444:2020120202012020236743555Thermoanaerobacter italicus Ab9 chromosome, complete genomeDNA-directed RNA polymerase, beta' subunit7e-0962
NC_009699:3790917:3815568381556838191043537Clostridium botulinum F str. Langeland chromosome, complete genomeDNA-directed RNA polymerase subunit beta'7e-0962
NC_017297:3787191:3814182381418238177183537Clostridium botulinum F str. 230613 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'7e-0962
NC_003888:5042283:5081644508164450855433900Streptomyces coelicolor A3(2), complete genomeDNA-directed RNA polymerase beta' subunit8e-0961.6
NC_013169:2147111:2160099216009921639923894Kytococcus sedentarius DSM 20547, complete genomeDNA-directed RNA polymerase subunit beta'8e-0961.6
NC_021177:4912982:4927522492752249314213900Streptomyces fulvissimus DSM 40593, complete genomeRPOC DNA-directed RNA polymerase subunit beta'8e-0961.6
NC_016109:3591401:3595201359520135990943894Kitasatospora setae KM-6054, complete genomeDNA-directed RNA polymerase subunit beta'8e-0961.6
NC_003155:5957657:5973224597322459771233900Streptomyces avermitilis MA-4680, complete genomeDNA-directed RNA polymerase beta' subunit8e-0961.6
NC_009633:4563877:4583610458361045871253516Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA-directed RNA polymerase subunit beta'8e-0961.6
NC_010572:3363830:3366887336688733707863900Streptomyces griseus subsp. griseus NBRC 13350, complete genomeRNA polymerase beta prime subunit8e-0961.6
NC_015519:197836:2054142054142089683555Tepidanaerobacter sp. Re1 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'9e-0961.6
NC_013757:4707960:4734220473422047381253906Geodermatophilus obscurus DSM 43160, complete genomeDNA-directed RNA polymerase, beta' subunit9e-0961.6
NC_016943:4145981:4159419415941941633243906Blastococcus saxobsidens DD2, complete genomeDNA-directed RNA polymerase subunit beta'9e-0961.6
NC_015953:4385419:4389034438903443929333900Streptomyces sp. SirexAA-E chromosome, complete genomeDNA-directed RNA polymerase subunit beta'9e-0961.6
NC_010674:222016:2406962406962442293534Clostridium botulinum B str. Eklund 17B, complete genomeDNA-directed RNA polymerase, beta' subunit9e-0961.6
NC_013929:4186840:4186840418684041907393900Streptomyces scabiei 87.22 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'9e-0961.6
NC_007793:574580:5892695892695928653597Staphylococcus aureus subsp. aureus USA300, complete genomeDNA-directed RNA polymerase, beta' subunit1e-0861.2
NC_011898:351792:3615013615013650103510Clostridium cellulolyticum H10, complete genomeDNA-directed RNA polymerase, beta' subunit1e-0861.2
NC_007622:537195:5518555518555554783624Staphylococcus aureus RF122, complete genomeDNA-directed RNA polymerase beta' subunit1e-0861.2
NC_010079:575123:5897855897855934083624Staphylococcus aureus subsp. aureus USA300_TCH1516, completeDNA-directed RNA polymerase subunit beta'1e-0861.2
NC_004461:277291:3053613053613089843624Staphylococcus epidermidis ATCC 12228, complete genomeDNA-directed RNA polymerase beta' subunit1e-0861.2
NC_002976:177282:1896121896121932353624Staphylococcus epidermidis RP62A, complete genomeDNA-directed RNA polymerase beta' subunit1e-0861.2
NC_002951:596000:6106766106766142993624Staphylococcus aureus subsp. aureus COL, complete genomeDNA-directed RNA polymerase beta' subunit1e-0861.2
NC_003923:559208:5738705738705774933624Staphylococcus aureus subsp. aureus MW2, complete genomeDNA-directed RNA polymerase beta' subunit1e-0861.2
NC_002758:592892:6075546075546111773624Staphylococcus aureus subsp. aureus Mu50, complete genomeDNA-directed RNA polymerase beta' subunit1e-0861.2
NC_020164:2219612:2231066223106622346893624Staphylococcus warneri SG1, complete genomeDNA-directed RNA polymerase subunit beta'1e-0861.2
NC_017341:591952:6027406027406063363597Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,DNA-directed RNA polymerase beta' chain protein1e-0861.2
NC_007795:511186:5258755258755294713597Staphylococcus aureus subsp. aureus NCTC 8325, complete genomeDNA directed RNA polymerase beta-prime chain, putative1e-0861.2
NC_015958:2251619:2299727229972723032813555Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'1e-0860.8
NC_014964:388458:4059084059084094623555Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeDNA-directed RNA polymerase subunit beta'1e-0860.8
NC_010321:393000:4104924104924140463555Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeDNA-directed RNA polymerase subunit beta'1e-0860.8
NC_019970:336472:3743573743573779113555Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeDNA-directed RNA polymerase subunit beta'1e-0861.2
NC_014410:403776:4208574208574244113555Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,DNA-directed RNA polymerase, beta' subunit1e-0861.2
NC_015555:327562:3446843446843482383555Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeDNA-directed RNA polymerase subunit beta'1e-0861.2
NC_018704:124823:1297211297211333473627Amphibacillus xylanus NBRC 15112, complete genomeDNA-directed RNA polymerase subunit beta'1e-0861.2
NC_014152:305955:3093663093663128333468Thermincola sp. JR, complete genomeDNA-directed RNA polymerase, beta' subunit1e-0861.2
NC_016627:762000:7678227678227713253504Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'1e-0861.2
NC_015520:2280643:2292443229244322959733531Mahella australiensis 50-1 BON chromosome, complete genomeDNA-directed RNA polymerase subunit beta'1e-0861.2
NC_002952:582365:5945195945195981423624Staphylococcus aureus subsp. aureus MRSA252, complete genomeDNA-directed RNA polymerase beta' subunit1e-0861.2
NC_009782:596847:6090016090016126243624Staphylococcus aureus subsp. aureus Mu3, complete genomeRNA polymerase beta-prime chain1e-0861.2
NC_014387:2869914:2890863289086328946063744Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeDNA directed RNA polymerase beta-prime subunit RpoC1e-0861.2
NC_017347:586629:5987835987836024063624Staphylococcus aureus subsp. aureus T0131 chromosome, completeDNA-directed RNA polymerase subunit beta'1e-0861.2
NC_012121:198480:2090582090582126963639Staphylococcus carnosus subsp. carnosus TM300, complete genomeRNA polymerase beta-prime chain1e-0861.2
NC_016111:3769818:3783170378317037870693900Streptomyces cattleya NRRL 8057, complete genomeRNA polymerase (beta' subunit)1e-0861.2
NC_007168:2448422:2461987246198724656073621Staphylococcus haemolyticus JCSC1435, complete genomeDNA-directed RNA polymerase beta' subunit1e-0861.6
NC_010001:4520979:4526626452662645303933768Clostridium phytofermentans ISDg, complete genomeDNA-directed RNA polymerase, beta' subunit1e-0861.6
NC_020134:301500:3250243250243285633540Clostridium stercorarium subsp. stercorarium DSM 8532, completeDNA-directed RNA polymerase subunit beta'1e-0861.6
NC_014220:2265882:2265882226588222693403459Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeDNA-directed RNA polymerase, beta' subunit1e-0861.6
NC_009012:3204696:3215205321520532187023498Clostridium thermocellum ATCC 27405, complete genomeDNA-directed RNA polymerase, beta' subunit1e-0861.6
NC_010718:193231:2112982112982149543657Natranaerobius thermophilus JW/NM-WN-LF, complete genomeDNA-directed RNA polymerase, beta' subunit1e-0861.6
NC_009487:609170:6238316238316274543624Staphylococcus aureus subsp. aureus JH9 chromosome, completeDNA-directed RNA polymerase subunit beta'1e-0861.2
NC_013893:2406893:2412063241206324156863624Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeDNA-directed RNA polymerase beta' subunit1e-0861.2
NC_002745:572959:5833085833085869313624Staphylococcus aureus subsp. aureus N315, complete genomeDNA-directed RNA polymerase beta' subunit1e-0861.2
NC_002953:561740:5725015725015761243624Staphylococcus aureus subsp. aureus MSSA476, complete genomeDNA-directed RNA polymerase beta' subunit1e-0861.2
NC_009632:609046:6237076237076273303624Staphylococcus aureus subsp. aureus JH1 chromosome, completeDNA-directed RNA polymerase subunit beta'1e-0861.2
NC_009641:565103:5797655797655833883624Staphylococcus aureus subsp. aureus str. Newman chromosome,DNA-directed RNA polymerase subunit beta'1e-0861.2
NC_016912:511182:5258445258445294673624Staphylococcus aureus subsp. aureus VC40 chromosome, completeDNA-directed RNA polymerase subunit beta'1e-0861.2
NC_016928:561138:5732915732915769143624Staphylococcus aureus subsp. aureus M013 chromosome, completeDNA-directed RNA polymerase subunit beta'1e-0861.2
NC_016941:549373:5621755621755657983624Staphylococcus aureus subsp. aureus MSHR1132, complete genomeDNA-directed RNA polymerase beta' chain protein1e-0861.2
NC_017337:580850:5955125955125991353624Staphylococcus aureus subsp. aureus ED133 chromosome, completeDNA-directed RNA polymerase subunit beta1e-0861.2
NC_017338:556319:5670805670805707033624Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeDNA-directed RNA polymerase beta' chain protein1e-0861.2
NC_017342:2758157:2766014276601427696373624Staphylococcus aureus subsp. aureus TCH60 chromosome, completeDNA-directed RNA polymerase subunit beta prime1e-0861.2
NC_015949:1363053:1372929137292913764203492Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.5
NC_020207:2575808:2580685258068525843383654Enterococcus faecium NRRL B-2354, complete genomeDNA-directed RNA polymerase beta' subunit2e-0860.5
NC_014165:597000:6007536007536046253873Thermobispora bispora DSM 43833 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.5
NC_015913:1491393:1508084150808415116443561Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.5
NC_015516:1801500:1803952180395218076083657Melissococcus plutonius ATCC 35311, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.5
NC_016938:336000:3465213465213501743654Melissococcus plutonius DAT561 chromosome 1, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.5
NC_014652:1898969:1909708190970819131993492Caldicellulosiruptor hydrothermalis 108 chromosome, completeDNA-directed RNA polymerase, beta' subunit2e-0860.5
NC_020995:3300751:3328497332849733321473651Enterococcus casseliflavus EC20, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.5
NC_012034:893000:8993518993519028423492Anaerocellum thermophilum DSM 6725, complete genomeDNA-directed RNA polymerase, beta' subunit2e-0860.5
NC_013595:1100230:1103724110372411076113888Streptosporangium roseum DSM 43021, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.5
NC_014721:1953708:1963584196358419670753492Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeDNA-directed RNA polymerase, beta' subunit2e-0860.5
NC_014392:848195:8565638565638600543492Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeDNA-directed RNA polymerase, beta' subunit2e-0860.5
NC_014657:742739:7511067511067545973492Caldicellulosiruptor owensensis OL chromosome, complete genomeDNA-directed RNA polymerase, beta' subunit2e-0860.5
NC_014377:112992:1194611194611230153555Thermosediminibacter oceani DSM 16646 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.1
NC_017294:1457262:1474475147447514780473573Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.5
NC_007503:2063451:2078498207849820819563459Carboxydothermus hydrogenoformans Z-2901, complete genomeDNA-directed RNA polymerase beta' subunit2e-0860.5
NC_010320:881351:8965138965138999863474Thermoanaerobacter sp. X514 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.5
NC_014171:109280:1191981191981224523255Bacillus thuringiensis BMB171 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.8
NC_013159:380014:3800143800143839253912Saccharomonospora viridis DSM 43017, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.8
NC_013406:6422000:6439459643945964430733615Paenibacillus sp. Y412MC10 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.8
NC_018515:223164:2299052299052333573453Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.8
NC_017208:108134:1208911208911245023612Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA-directed RNA polymerase subunit beta'2e-0860.8
NC_014391:6175531:6190039619003961939263888Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.8
NC_014815:622048:6353046353046391913888Micromonospora sp. L5 chromosome, complete genomeDNA-directed RNA polymerase, beta' subunit2e-0860.8
NC_013216:293571:3042343042343077613528Desulfotomaculum acetoxidans DSM 771, complete genomeDNA-directed RNA polymerase, beta' subunit2e-0860.8
NC_016012:1380260:1397878139787814014383561Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.5
NC_014538:1998180:2014598201459820181523555Thermoanaerobacter sp. X513 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.5
NC_015275:3846260:3868617386861738722463630Clostridium lentocellum DSM 5427 chromosome, complete genomeDNA-directed RNA polymerase, beta' subunit2e-0860.5
NC_011025:183287:2009982009982053924395Mycoplasma arthritidis 158L3-1, complete genomeDNA-directed RNA polymerase beta' subunit2e-0860.5
NC_016052:82358:9296192961966143654Tetragenococcus halophilus NBRC 12172, complete genomeDNA-directed RNA polymerase beta' chain2e-0860.5
NC_015312:5783366:5792072579207257959743903Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'2e-0860.8
NC_019978:178277:1898861898861933203435Halobacteroides halobius DSM 5150, complete genomeDNA-directed RNA polymerase, beta' subunit, predominant form3e-0859.7
NC_004193:119737:1325901325901362013612Oceanobacillus iheyensis HTE831, complete genomeDNA-directed RNA polymerase beta' subunit3e-0859.7
NC_008025:669281:6852496852496898624614Deinococcus geothermalis DSM 11300, complete genomeDNA-directed RNA polymerase, subunit beta-prime3e-0859.7
NC_009454:316000:3202853202853237973513Pelotomaculum thermopropionicum SI, complete genomeDNA-directed RNA polymerase subunit beta'3e-0860.1
NC_014829:133305:1404021404021440163615Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeDNA-directed RNA polymerase, beta' subunit3e-0860.1
NC_019673:8763773:8766379876637987702753897Saccharothrix espanaensis DSM 44229 complete genomeDNA-directed RNA polymerase subunit beta3e-0860.1
NC_013385:1504650:1521568152156815250923525Ammonifex degensii KC4, complete genomeDNA-directed RNA polymerase, beta' subunit3e-0860.1
NC_013093:7722436:7756765775676577606613897Actinosynnema mirum DSM 43827, complete genomeDNA-directed RNA polymerase, beta' subunit3e-0860.1
NC_014614:2295131:2319293231929323228323540Clostridium sticklandii, complete genomeDNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (Transcriptase subunit beta') (RNA polymerase subunit beta')3e-0860.1
NC_017095:2143845:2150031215003121549834953Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'4e-0859.3
NC_014654:2101500:2117904211790421213833480Halanaerobium sp. 'sapolanicus' chromosome, complete genomeDNA-directed RNA polymerase, beta' subunit4e-0859.3
NC_015636:468500:4795914795914810691479Methanothermococcus okinawensis IH1 chromosome, complete genomeRNA polymerase Rpb1 domain 55e-0859.3
NC_014448:65000:7287472874771364263Mycoplasma hyorhinis HUB-1 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'6e-0858.9
NC_011653:1339868:1363144136314413680934950Thermosipho africanus TCF52B, complete genomeDNA-directed RNA polymerase beta' chain8e-0858.5
NC_015707:826649:8393388393388442814944Thermotoga thermarum DSM 5069 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'9e-0858.5
NC_011047:443475:4675594675594716174059Candidatus Phytoplasma mali, complete genomeDNA-directed RNA polymerase beta' chain9e-0858.2
NC_012785:1960500:1965955196595519706374683Kosmotoga olearia TBF 19.5.1, complete genomeDNA-directed RNA polymerase, beta' subunit9e-0858.2
NC_010163:145808:1583581583581624854128Acholeplasma laidlawii PG-8A chromosome, complete genomeDNA-directed RNA polymerase subunit beta'1e-0757.8
NC_008148:2156873:2173406217340621772933888Rubrobacter xylanophilus DSM 9941, complete genomeDNA-directed RNA polymerase, subunit beta-prime1e-0757.8
NC_016751:1776669:1789194178919417939304737Marinitoga piezophila KA3 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'1e-0757.8
NC_011899:124500:1279651279651314623498Halothermothrix orenii H 168, complete genomeDNA-directed RNA polymerase, beta' subunit1e-0758.2
NC_009828:469778:5053865053865103384953Thermotoga lettingae TMO, complete genomeDNA-directed RNA polymerase, beta' subunit1e-0758.2
NC_005303:272915:2978492978493019104062Onion yellows phytoplasma OY-M, complete genomeDNA-directed RNA polymerase beta' subunit2e-0757
NC_015514:1088767:1096747109674711006133867Cellulomonas fimi ATCC 484 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'2e-0757
NC_015671:874500:8824518824518863173867Cellvibrio gilvus ATCC 13127 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'2e-0757
NC_008528:1265542:1279099127909912828003702Oenococcus oeni PSU-1, complete genomeDNA-directed RNA polymerase, beta' subunit/160 kD subunit2e-0757
NC_014151:2945037:2963785296378529676543870Cellulomonas flavigena DSM 20109 chromosome, complete genomeDNA-directed RNA polymerase, beta' subunit2e-0757
NC_015588:701606:7051747051747090553882Isoptericola variabilis 225 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'2e-0757.4
NC_009767:2051203:2051203205120320557114509Roseiflexus castenholzii DSM 13941, complete genomeDNA-directed RNA polymerase, beta' subunit3e-0756.6
NC_014833:3268102:3279324327932432829143591Ruminococcus albus 7 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'3e-0756.6
NC_007716:467235:4753584753584794194062Aster yellows witches'-broom phytoplasma AYWB, complete genomeDNA-directed RNA polymerase beta' chain3e-0757
NC_013172:2647716:2665357266535726692413885Brachybacterium faecium DSM 4810, complete genomeDNA-directed RNA polymerase subunit beta'4e-0756.2
NC_014921:313312:3225853225853270604476Mycoplasma fermentans M64 chromosome, complete genomeDNA-directed RNA polymerase subunit beta4e-0756.2
NC_009664:1569335:1593919159391915978003882Kineococcus radiotolerans SRS30216, complete genomeDNA-directed RNA polymerase, beta' subunit5e-0755.8
NC_014644:1456689:1470633147063314746524020Gardnerella vaginalis ATCC 14019 chromosome, complete genomeDNA-directed RNA polymerase subunit beta prime8e-0755.1
NC_014759:3572500:3583602358360235879004299Marivirga tractuosa DSM 4126 chromosome, complete genomeDNA-directed RNA polymerase subunit beta'6e-0652.4