Pre_GI: BLASTN Hits

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Query: NC_009953:3426344 Salinispora arenicola CNS-205 chromosome, complete genome

Start: 3426344, End: 3447180, Length: 20837

Host Lineage: Salinispora arenicola; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Found in marine sediment, this organism produces cancer-fighting compounds. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. Salinispora arenicola produces the bioactive compounds staurosporine and rifamycin which may be useful in the treatment of cancer.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013093:54194585419458545295833501Actinosynnema mirum DSM 43827, complete genome6e-38167BLASTN svgBLASTP svg
NC_013093:57919615791961581744825488Actinosynnema mirum DSM 43827, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014318:63953926395392646309967708Amycolatopsis mediterranei U32 chromosome, complete genome6e-35157BLASTN svgBLASTP svg
NC_009921:36668983666898374071873821Frankia sp. EAN1pec, complete genome1e-45192BLASTN svgBLASTP svg
NC_009921:34199783419978344561625639Frankia sp. EAN1pec, complete genome1e-38168BLASTN svgBLASTP svg
NC_013757:1343396*1343396136140718012Geodermatophilus obscurus DSM 43160, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012803:3691*36914264438954Micrococcus luteus NCTC 2665, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014391:1226922*1226922125015223231Micromonospora aurantiaca ATCC 27029 chromosome, complete genome6e-38167BLASTN svgBLASTP svg
NC_014391:19102731910273196409853826Micromonospora aurantiaca ATCC 27029 chromosome, complete genome4e-36161BLASTN svgBLASTP svg
NC_014815:6616500*6616500671195895459Micromonospora sp. L5 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_014815:46215524621552466359942048Micromonospora sp. L5 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014815:1490957*1490957151776526809Micromonospora sp. L5 chromosome, complete genome9e-37163BLASTN svgBLASTP svg
NC_006361:30477883047788307176223975Nocardia farcinica IFM 10152, complete genome5e-26127BLASTN svgBLASTP svg
NC_014210:14717521471752153434662595Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,2e-25125BLASTN svgBLASTP svg
NC_015312:52406535240653526596525313Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009142:25655612565561258937023810Saccharopolyspora erythraea NRRL 2338, complete genome1e-0560BLASTN svgBLASTP svg
NC_019673:8161242*8161242818734226101Saccharothrix espanaensis DSM 44229 complete genome2e-31145BLASTN svgBLASTP svg
NC_019673:7951493*7951493797009918607Saccharothrix espanaensis DSM 44229 complete genome7e-19103BLASTN svgBLASTP svg
NC_003888:85945008594500861384119342Streptomyces coelicolor A3(2), complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015953:46732467328409937368Streptomyces sp. SirexAA-E chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015434:666692*66669270459937908Verrucosispora maris AB-18-032 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg