Pre_GI: BLASTN Hits

Some Help

Query: NC_009953:2727669 Salinispora arenicola CNS-205 chromosome, complete genome

Start: 2727669, End: 2755188, Length: 27520

Host Lineage: Salinispora arenicola; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Found in marine sediment, this organism produces cancer-fighting compounds. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. Salinispora arenicola produces the bioactive compounds staurosporine and rifamycin which may be useful in the treatment of cancer.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013093:24715742471574251123439661Actinosynnema mirum DSM 43827, complete genome6e-54220BLASTN svgBLASTP svg
NC_014318:51839755183975520609922125Amycolatopsis mediterranei U32 chromosome, complete genome5e-73283BLASTN svgBLASTP svg
NC_018720:993869*993869102159927731Bifidobacterium asteroides PRL2011 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007164:10908581090858111859527738Corynebacterium jeikeium K411, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008278:40239184023918406150737590Frankia alni ACN14a, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007777:26385802638580267126232683Frankia sp. CcI3, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009921:26057212605721262856122841Frankia sp. EAN1pec, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009921:49485004948500497677728278Frankia sp. EAN1pec, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015656:27957842795784281882923046Frankia symbiont of Datisca glomerata chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_013441:27888062788806282218133376Gordonia bronchialis DSM 43247, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015635:93224093224095905926820Microlunatus phosphovorus NM-1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008595:2432184*2432184245655424371Mycobacterium avium 104, complete genome1e-30143BLASTN svgBLASTP svg
NC_011896:17160001716000173793921940Mycobacterium leprae Br4923, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_002677:17160001716000173800622007Mycobacterium leprae TN, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_013947:19569231956923198076223840Stackebrandtia nassauensis DSM 44728 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013947:33471743347174338411536942Stackebrandtia nassauensis DSM 44728 chromosome, complete genome6e-20107BLASTN svgBLASTP svg
NC_015957:32821833282183330581123629Streptomyces violaceusniger Tu 4113 chromosome, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_006177:46745*467457785031106Symbiobacterium thermophilum IAM 14863, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014165:20819142081914210211520202Thermobispora bispora DSM 43833 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg