Pre_GI: BLASTN Hits

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Query: NC_009953:1484000 Salinispora arenicola CNS-205 chromosome, complete genome

Start: 1484000, End: 1502456, Length: 18457

Host Lineage: Salinispora arenicola; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Found in marine sediment, this organism produces cancer-fighting compounds. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. Salinispora arenicola produces the bioactive compounds staurosporine and rifamycin which may be useful in the treatment of cancer.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021177:69546756954675697309918425Streptomyces fulvissimus DSM 40593, complete genome8e-111408BLASTN svgBLASTP svg
NC_015953:18609461860946187926918324Streptomyces sp. SirexAA-E chromosome, complete genome4e-26127BLASTN svgBLASTP svg
NC_014391:4617688*4617688463728919602Micromonospora aurantiaca ATCC 27029 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_009142:27250002725000275437129372Saccharopolyspora erythraea NRRL 2338, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_013093:57919615791961581744825488Actinosynnema mirum DSM 43827, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_014391:1226922*1226922125015223231Micromonospora aurantiaca ATCC 27029 chromosome, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_003155:210240*21024026219151952Streptomyces avermitilis MA-4680, complete genome5e-0763.9BLASTN svgBLASTP svg