Pre_GI: BLASTP Hits

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Query: NC_009953:4942500:4945949 Salinispora arenicola CNS-205 chromosome, complete genome

Start: 4945949, End: 4946911, Length: 963

Host Lineage: Salinispora arenicola; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Found in marine sediment, this organism produces cancer-fighting compounds. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. Salinispora arenicola produces the bioactive compounds staurosporine and rifamycin which may be useful in the treatment of cancer.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013729:4978401:499089449908944991847954Kribbella flavida DSM 17836, complete genomeHelix-turn-helix type 11 domain protein2e-61236
NC_013729:4978401:498611749861174987112996Kribbella flavida DSM 17836, complete genomeHelix-turn-helix type 11 domain protein7e-33141
NC_013947:5075581:5081866508186650828761011Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein2e-31136
NC_015125:1668780:168712716871271688122996Microbacterium testaceum StLB037, complete genomepredicted transcriptional regulator7e-27121
NC_013729:5982000:598555659855565986518963Kribbella flavida DSM 17836, complete genomeHelix-turn-helix type 11 domain protein5e-24112
NC_016114:4210173:4212930421293042139641035Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeregulatory protein DeoR5e-22105
NC_018681:7692560:769893876989387699930993Nocardia brasiliensis ATCC 700358 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein2e-1996.7
NC_015671:1865752:188228018822801883251972Cellvibrio gilvus ATCC 13127 chromosome, complete genomeDeoR family transcriptional regulator2e-1790.5
NC_015957:7408466:743208074320807433060981Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein DeoR2e-1687
NC_013169:1845735:186560718656071866323717Kytococcus sedentarius DSM 20547, complete genomepredicted transcriptional regulator4e-1582.4
NC_009380:1491428:1512341151234115133601020Salinispora tropica CNB-440 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein2e-1480.1
NC_015953:2512152:253349725334972533910414Streptomyces sp. SirexAA-E chromosome, complete genome2e-1170.5