Pre_GI: BLASTP Hits

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Query: NC_009952:3596399:3620154 Dinoroseobacter shibae DFL 12, complete genome

Start: 3620154, End: 3623531, Length: 3378

Host Lineage: Dinoroseobacter shibae; Dinoroseobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This aerobic anoxygenic phototroph was isolated from cultivated marine dinoflagellates originally from the Bay of Tokyo, Japan. Liquid cultures grown in the dark are distinctly pink, while colonies on complex agar media are dark red.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002696:3759551:3785717378571737893283612Caulobacter crescentus CB15, complete genomehelicase, UvrD/Rep family1e-147525
NC_014774:293800:2902742902742938133540Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completedouble-strand break repair helicase AddA5e-111403
NC_010184:1114000:1121749112174911254743726Bacillus weihenstephanensis KBAB4, complete genomeRecombination helicase AddA3e-38161
NC_009720:870194:8701948701948735173324Xanthobacter autotrophicus Py2, complete genomeUvrD/REP helicase8e-38159
NC_010368:191920:2037122037122073473636Halobacterium salinarum R1 plasmid PHS3, complete sequenceputative helicase5e-37157
NC_020453:7826358:7826358782635878296753318Agromonas oligotrophica S58 DNA, complete genomeUvrD/REP helicase5e-36154
NC_016047:1234743:1254214125421412579183705Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completerecombination helicase AddA8e-35149
NC_016627:3972751:3975148397514839789123765Clostridium clariflavum DSM 19732 chromosome, complete genomerecombination helicase AddA9e-35149
NC_015978:1266196:1262475126247512662033729Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeATP-dependent helicase/nuclease subunit A3e-32141
NC_009051:1455183:1496202149620214994443243Methanoculleus marisnigri JR1, complete genomeUvrD/REP helicase7e-32140
NC_015388:269301:2693012693012727143414Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeUvrD/REP helicase6e-31137
NC_014315:2239725:2236289223628922397323444Nitrosococcus watsoni C-113 chromosome, complete genomeUvrD/REP helicase2e-30135
NC_011772:1094534:1106450110645011101753726Bacillus cereus G9842, complete genomeATP-dependent nuclease, subunit A6e-29130
NC_014171:1118000:1128345112834511320703726Bacillus thuringiensis BMB171 chromosome, complete genomeATP-dependent nuclease subunit A7e-29130
NC_004722:1108649:1120491112049111242163726Bacillus cereus ATCC 14579, complete genomeATP-dependent nuclease subunit A7e-29130
NC_015732:30472:6948969489730223534Spirochaeta caldaria DSM 7334 chromosome, complete genomeUvrD/REP helicase7e-29130
NC_011725:1150779:1162548116254811662733726Bacillus cereus B4264 chromosome, complete genomeATP-dependent nuclease subunit A8e-29130
NC_017208:1147230:1159040115904011627653726Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeATP-dependent nuclease subunit A1e-28129
NC_005945:1103729:1115543111554311192683726Bacillus anthracis str. Sterne, complete genomeATP-dependent nuclease, subunit A1e-28129
NC_012659:1103737:1115551111555111192763726Bacillus anthracis str. A0248, complete genomeATP-dependent nuclease, subunit A1e-28129
NC_011969:1181302:1191830119183011955553726Bacillus cereus Q1 chromosome, complete genomeATP-dependent nuclease, subunit a1e-28129
NC_003909:1244000:1254852125485212585773726Bacillus cereus ATCC 10987, complete genomeATP-dependent nuclease, subunit A1e-28129
NC_014335:1094000:1105302110530211090273726Bacillus cereus biovar anthracis str. CI chromosome, completeATP-dependent nuclease subunit A9e-29129
NC_013520:1905554:1912628191262819164943867Veillonella parvula DSM 2008, complete genomerecombination helicase AddA8e-28126
NC_010725:3315007:3335885333588533390283144Methylobacterium populi BJ001, complete genomeUvrD/REP helicase8e-28126
NC_020388:1479568:1527842152784215316603819Natronomonas moolapensis 8.8.11 complete genomeUvrD/REP family helicase2e-25118
NC_006576:414696:4315394315394347243186Synechococcus elongatus PCC 6301, complete genomehypothetical protein6e-25117
NC_007604:1183497:1186081118608111892663186Synechococcus elongatus PCC 7942, complete genomehypothetical protein5e-25117
NC_015428:2291430:2308080230808023118383759Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeATP-dependent helicase/nuclease subunit A1e-24115
NC_018581:2768743:2778553277855327818073255Gordonia sp. KTR9 chromosome, complete genomeATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)2e-24115
NC_011830:3025437:3043677304367730478554179Desulfitobacterium hafniense DCB-2, complete genomerecombination helicase AddA9e-23110
NC_007907:1940000:1958144195814419623224179Desulfitobacterium hafniense Y51, complete genomehypothetical protein9e-23109
NC_015740:3678342:3678342367834236820223681Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeexodeoxyribonuclease V subunit beta1e-22109
NC_016641:5528826:5539691553969155437884098Paenibacillus terrae HPL-003 chromosome, complete genomeATP-dependent nuclease subunit A1e-21106
NC_014614:260782:2675712675712711253555Clostridium sticklandii, complete genomeATP-dependent nuclease, subunit A2e-21105
NC_010694:3055403:3055403305540330589393537Erwinia tasmaniensis, complete genomeExodeoxyribonuclease V beta chain1e-21105
NC_020209:3797830:3794159379415937978333675Pseudomonas poae RE*1-1-14, complete genomeexodeoxyribonuclease V subunit beta5e-21103
NC_020291:1:2221022210259413732Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeATP-dependent helicase/nuclease subunit A5e-21103
NC_015425:369225:3726203726203763543735Clostridium botulinum BKT015925 chromosome, complete genomeATP-dependent nuclease subunit A8e-21103
NC_020409:297258:2972582972583004043147Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeUvrD/REP helicase1e-20102
NC_020388:1869000:1872073187207318755343462Natronomonas moolapensis 8.8.11 complete genomeUvrD/REP family helicase1e-20102
NC_014622:3819495:3827329382732938313484020Paenibacillus polymyxa SC2 chromosome, complete genomerecombination helicase adda1e-20102
NC_014365:2037506:2061168206116820646473480Desulfarculus baarsii DSM 2075 chromosome, complete genomeUvrD/REP helicase2e-20102
NC_015519:2045935:2048474204847420513862913Tepidanaerobacter sp. Re1 chromosome, complete genomeUvrD/REP helicase4e-20101
NC_014500:2479814:2500330250033025040043675Dickeya dadantii 3937 chromosome, complete genomeexonuclease V (RecBCD complex), subunit beta3e-20101
NC_019814:320260:3202603202603236193360Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonashypothetical protein5e-1997.4
NC_009465:90000:9221992219953893171Candidatus Vesicomyosocius okutanii HA, complete genomeATP-dependent DNA helicase8e-1996.7
NC_014729:1185294:1198980119898012024383459Halogeometricum borinquense DSM 11551 chromosome, complete genomeATP-dependent exonuclase v subunit beta, helicase and exonuclease domain-containing5e-1894
NC_013851:3478153:3489678348967834935323855Allochromatium vinosum DSM 180 chromosome, complete genomeexodeoxyribonuclease V, beta subunit2e-1792.4
NC_018645:4945698:4953396495339649571633768Desulfobacula toluolica Tol2, complete genomeexodeoxyribonuclease V subunit beta2e-1792
NC_008536:33776:4416344163474293267Solibacter usitatus Ellin6076, complete genomeUvrD/REP helicase3e-1791.7
NC_014844:2028666:2049096204909620522633168Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeUvrD/REP helicase5e-1790.9
NC_021171:358456:3625633625633647762214Bacillus sp. 1NLA3E, complete genomeATP-dependent DNA helicase5e-1790.9
NC_009785:1443500:1456866145686614605163651Streptococcus gordonii str. Challis substr. CH1, complete genomefirst chain of major exonuclease RexA3e-1688.2
NC_011206:2512667:2516056251605625196523597Acidithiobacillus ferrooxidans ATCC 53993, complete genomeexodeoxyribonuclease V, beta subunit6e-1687.4
NC_010278:1467146:1468739146873914709372199Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,DNA-dependent helicase II9e-1686.7
NC_004459:1794540:1790923179092317945433621Vibrio vulnificus CMCP6 chromosome I, complete sequenceATP-dependent exoDNAse beta subunit1e-1586.7
NC_015738:978794:1043373104337310470443672Eggerthella sp. YY7918, complete genomeATP-dependent exoDNAse exonuclease V subunit beta2e-1585.9
NC_006270:718169:7181697181697203882220Bacillus licheniformis ATCC 14580, complete genomeATP-dependent DNA helicase2e-1585.5
NC_006322:717953:7179537179537201722220Bacillus licheniformis ATCC 14580, complete genomePcrA2e-1585.5
NC_011745:3197584:3215233321523332187753543Escherichia coli ED1a chromosome, complete genomeexonuclease V subunit beta2e-1585.5
NC_013361:3823347:3840997384099738445393543Escherichia coli O26:H11 str. 11368 chromosome, complete genomeexonuclease V subunit beta3e-1585.1
NC_010498:3023442:3041092304109230446043513Escherichia coli SMS-3-5, complete genomeexodeoxyribonuclease V, beta subunit3e-1585.1
NC_010939:405477:4438164438164474243609Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeexodeoxyribonuclease V beta chain4e-1584.7
NC_010278:398521:4207614207614243693609Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,exodeoxyribonuclease V subunit beta4e-1584.7
NC_009053:393700:4160344160344196423609Actinobacillus pleuropneumoniae L20, complete genomeexodeoxyribonuclease V beta chain4e-1584.7
NC_007613:2699500:2715195271519527187373543Shigella boydii Sb227, complete genomeATP-dependent dsDNA/ssDNA exonuclease V subunit5e-1584.3
NC_014762:1715190:1715190171519017184983309Sulfuricurvum kujiense DSM 16994 chromosome, complete genomeuvrd/rep helicase6e-1584
NC_008253:2965573:2983115298311529866573543Escherichia coli 536, complete genomeexodeoxyribonuclease V beta chain6e-1584
NC_012791:4794362:4820354482035448241453792Variovorax paradoxus S110 chromosome 1, complete genomeexodeoxyribonuclease V, beta subunit9e-1583.6
NC_015508:296856:3134503134503166353186Agrobacterium sp. H13-3 chromosome linear, complete sequenceexodeoxyribonuclease V subunit beta1e-1482.8
NC_019978:2293327:2307011230701123091222112Halobacteroides halobius DSM 5150, complete genomeATP-dependent DNA helicase PcrA1e-1482.8
NC_014924:3334386:3354099335409933577163618Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeexodeoxyribonuclease V, beta subunit2e-1482.4
NC_013889:1740858:1737139173713917408613723Thioalkalivibrio sp. K90mix chromosome, complete genomeexodeoxyribonuclease V, beta subunit2e-1482
NC_011742:3057444:3074776307477630783183543Escherichia coli S88 chromosome, complete genomeexonuclease V subunit beta2e-1482
NC_007946:3125577:3142897314289731464483552Escherichia coli UTI89, complete genomeexodeoxyribonuclease V beta chain3e-1481.6
NC_007645:713930:7350657350657372302166Hahella chejuensis KCTC 2396, complete genomeSuperfamily I DNA and RNA helicase3e-1481.6
NC_015660:3518931:3562042356204235642342193Geobacillus thermoglucosidasius C56-YS93 chromosome, completeATP-dependent DNA helicase PcrA4e-1481.3
NC_014933:3015678:3025455302545530287693315Bacteroides helcogenes P 36-108 chromosome, complete genomeUvrD/REP helicase5e-1480.9
NC_013316:1081044:1106579110657911104063828Clostridium difficile R20291, complete genomeATP-dependent nuclease subunit A9e-1480.1
NC_016944:168530:1942241942241963952172Vibrio cholerae IEC224 chromosome I, complete sequenceDNA-dependent helicase II1e-1379.7
NC_016445:2593800:2619482261948226216532172Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA-dependent helicase II1e-1379.7
NC_012668:442601:4426014426014447722172Vibrio cholerae MJ-1236 chromosome 1, complete sequenceDNA-dependent helicase II1e-1379.7
NC_002505:168532:1942141942141963852172Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeDNA helicase II1e-1379.7
NC_019815:761480:7794157794157827743360Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiUvrD/Rep helicase family protein 22e-1379
NC_009089:1202261:1227866122786612316933828Clostridium difficile 630, complete genomeATP-dependent nuclease subunit A2e-1379
NC_015666:252740:3158373158373187162880Halopiger xanaduensis SH-6 chromosome, complete genomeUvrD/REP helicase2e-1378.6
NC_007712:3382000:3401801340180134053433543Sodalis glossinidius str. 'morsitans', complete genomeexodeoxyribonuclease V beta subunit4e-1378.2
NC_015578:2428500:2432809243280924359673159Treponema primitia ZAS-2 chromosome, complete genomeputative UvrD/REP helicase3e-1378.2
NC_002937:2068117:2138236213823621416943459Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeATP-dependent DNA helicase, UvrD/REP family3e-1378.2
NC_014829:443500:4665374665374688192283Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeATP-dependent DNA helicase PcrA4e-1377.8
NC_021171:2562000:2569926256992625731923267Bacillus sp. 1NLA3E, complete genomeUvrD/REP helicase5e-1377.4
NC_011761:2785660:2785660278566027877892130Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeDNA helicase II7e-1377.4
NC_011206:2685499:2685499268549926876282130Acidithiobacillus ferrooxidans ATCC 53993, complete genomeUvrD/REP helicase7e-1377.4
NC_021184:3793285:3798282379828238022203939Desulfotomaculum gibsoniae DSM 7213, complete genomeATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing1e-1276.3
NC_017200:345502:3455023455023477512250Bacillus thuringiensis serovar finitimus YBT-020 chromosome,ATP-dependent DNA helicase PcrA2e-1275.5
NC_016779:312500:3133533133533156142262Bacillus cereus F837/76 chromosome, complete genomeATP-dependent DNA helicase UvrD/PcrA2e-1275.5
NC_003902:4989855:5009047500904750131654119Xanthomonas campestris pv. campestris str. ATCC 33913, completeexodeoxyribonuclease V beta chain3e-1275.1
NC_014924:3065430:3065430306543030676102181Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeDNA helicase II3e-1275.1
NC_010688:4991410:5011365501136550154834119Xanthomonas campestris pv. campestris, complete genomeexodeoxyribonuclease V beta chain4e-1274.7
NC_017271:4852351:4873729487372948776823954Xanthomonas campestris pv. raphani 756C chromosome, completeexodeoxyribonuclease V subunit beta4e-1274.7
NC_007086:5064053:5081732508173250858504119Xanthomonas campestris pv. campestris str. 8004, complete genomeexodeoxyribonuclease V beta chain8e-1273.6
NC_008639:1573971:1592170159217015958353666Chlorobium phaeobacteroides DSM 266, complete genomeexodeoxyribonuclease V, beta subunit2e-1172.8
NC_014550:615609:6289646289646313422379Arthrobacter arilaitensis Re117, complete genomeATP-dependent DNA helicase PcrA2e-1172.4
NC_007426:1840670:1859558185955818626443087Natronomonas pharaonis DSM 2160, complete genomeprobable helicase5e-1170.9
NC_021182:2360500:2367269236726923712613993Clostridium pasteurianum BC1, complete genomerecombination helicase AddA6e-1170.9
NC_012796:4693500:4707295470729547091481854Desulfovibrio magneticus RS-1, complete genomeATP-dependent DNA helicase1e-1070.1
NC_015859:1069116:1089451108945110925733123Corynebacterium variabile DSM 44702 chromosome, complete genomeATP-dependent DNA helicase II8e-1170.1
NC_014483:3498395:3506660350666035106794020Paenibacillus polymyxa E681 chromosome, complete genomeATP-dependent nuclease subunit A2e-1068.9
NC_014541:4167916:4183237418323741854022166Ferrimonas balearica DSM 9799 chromosome, complete genomeATP-dependent DNA helicase UvrD3e-1068.6
NC_011901:625712:6616286616286636432016Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeATP-dependent DNA helicase Rep4e-1068.2
NC_012438:192065:1930181930181951202103Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeATP-dependent DNA helicase PcrA6e-1067.4
NC_012796:2041579:2051898205189820537721875Desulfovibrio magneticus RS-1, complete genomeATP-dependent DNA helicase7e-1067.4
NC_012796:4693500:4738098473809847399721875Desulfovibrio magneticus RS-1, complete genomeATP-dependent DNA helicase8e-1067
NC_020299:127480:1491181491181524593342Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeUvrD/Rep helicase family protein1e-0966.2
NC_020299:149118:1491181491181524593342Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeUvrD/Rep helicase family protein1e-0966.2
NC_014926:795549:7955497955497984252877Thermovibrio ammonificans HB-1 chromosome, complete genomeUvrD/REP helicase2e-0965.5
NC_009621:389181:4008564008564040113156Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequenceUvrD/REP helicase2e-0965.5
NC_019940:2546500:2567719256771925713003582Thioflavicoccus mobilis 8321 chromosome, complete genomeexodeoxyribonuclease V subunit beta3e-0965.1
NC_015064:1984662:1989249198924919927463498Acidobacterium sp. MP5ACTX9 chromosome, complete genomeUvrD/REP helicase6e-0964.3
NC_010545:619346:6399726399726430403069Corynebacterium urealyticum DSM 7109, complete genomeputative ATP-dependent DNA helicase II8e-0963.5
NC_013525:1953920:1968327196832719706662340Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeUvrD/REP helicase9e-0963.5
NC_014831:329983:3299833299833323582376Thermaerobacter marianensis DSM 12885 chromosome, complete genomeATP-dependent DNA helicase PcrA1e-0863.2
NC_012811:317308:3394763394763414762001Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative ATP-dependent DNA helicase1e-0863.2
NC_003919:5056650:5056650505665050586261977Xanthomonas axonopodis pv. citri str. 306, complete genomeATP-dependent DNA helicase1e-0862.8
NC_019978:1066000:1076331107633110794143084Halobacteroides halobius DSM 5150, complete genomeATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing3e-0862
NC_008228:816000:8307258307258335142790Pseudoalteromonas atlantica T6c, complete genomeUvrD/REP helicase3e-0862
NC_007644:2099878:2099878209987821020672190Moorella thermoacetica ATCC 39073, complete genomeATP-dependent DNA helicase PcrA3e-0861.6
NC_013204:1135397:1155067115506711575082442Eggerthella lenta DSM 2243, complete genomeUvrD/REP helicase6e-0860.8
NC_013223:2279869:2304961230496123071052145Desulfohalobium retbaense DSM 5692, complete genomeUvrD/REP helicase7e-0860.5
NC_007963:3553678:3568340356834035703882049Chromohalobacter salexigens DSM 3043, complete genomeATP-dependent DNA helicase Rep2e-0759.3
NC_018080:6048516:6099658609965861016672010Pseudomonas aeruginosa DK2 chromosome, complete genomeATP-dependent DNA helicase Rep2e-0758.9
NC_015067:1528984:1554473155447315585884116Bifidobacterium longum subsp. longum JCM 1217, complete genomeATP-dependent nuclease subunit A7e-0757.4
NC_002663:564958:5899775899775936693693Pasteurella multocida subsp. multocida str. Pm70, complete genomeRecB6e-0757.4
NC_014218:1437931:1439939143993914424492511Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeUvrD/REP helicase7e-0757
NC_014803:709000:7160817160817179971917Pseudoalteromonas sp. SM9913 chromosome chromosome I, completeUvrD family helicase1e-0656.6
NC_014033:1152994:1154615115461511570442430Prevotella ruminicola 23 chromosome, complete genomeputative ATP-dependent DNA helicase PcrA1e-0656.6
NC_012668:442601:4725634725634745782016Vibrio cholerae MJ-1236 chromosome 1, complete sequenceATP-dependent DNA helicase Rep2e-0655.8
NC_012804:1514533:1538600153860015402551656Thermococcus gammatolerans EJ3, complete genomeATP-dependent DNA helicase, putative, UvrD/REP family3e-0655.5
NC_010102:997417:1014640101464010180233384Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0655.1
NC_007951:2087385:2104394210439421059561563Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative ATP-dependent DNA helicase, Rep6e-0653.9
NC_007644:469181:4920174920174962344218Moorella thermoacetica ATCC 39073, complete genomeUvrD/REP helicase8e-0653.5