Pre_GI: BLASTP Hits

Some Help

Query: NC_009930:152500:165048 Acaryochloris marina MBIC11017 plasmid pREB5, complete sequence

Start: 165048, End: 166478, Length: 1431

Host Lineage: Acaryochloris marina; Acaryochloris; ; Chroococcales; Cyanobacteria; Bacteria

General Information: Acaryochloris marina MBIC11017 was isolated from algae from the coast of the Palau Islands in the western Pacific. Marine cyanobacterium. Acaryochloris marina was first isolated as an epiphyte of algae. M. marina been isolated from a variety of habitats and locations, usually associated with algae but also as free-living organisms. This cyanobacterium produces an atypical photosynthetic pigment, chlorophyll d, as the major reactive agent. The oxygenic photosynthesis based on this pigment may have evolved as an acclimatization to far-red light environments, or an as intermediate between the red-absorbing oxygenic and the far-red-absorbing anoxygenic photosynthesis that uses bacteriochlorophylls. Because of the unusual ratio of chlorophyll a to chlorophyll d in this organism, it has been used as a model to study the spectrographic characteristics of the two pigments.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009929:3923:2255322553238751323Acaryochloris marina MBIC11017 plasmid pREB4, complete sequenceRNA polymerase sigma factor0757
NC_007644:626992:6482906482906493751086Moorella thermoacetica ATCC 39073, complete genomesigma 38 (RpoS)1e-1688.2
NC_013517:3082279:3083339308333930845021164Sebaldella termitidis ATCC 33386, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily4e-1686.3
NC_013192:1993718:1993718199371819948961179Leptotrichia buccalis DSM 1135, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily5e-1685.9
NC_010424:531727:5317275317275328091083Candidatus Desulforudis audaxviator MP104C, complete genomeRNA polymerase, sigma 70 subunit, RpoD family1e-1584.7
NC_013515:550464:5673445673445684831140Streptobacillus moniliformis DSM 12112, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily4e-1583.2
NC_009929:58465:800918009180900810Acaryochloris marina MBIC11017 plasmid pREB4, complete sequenceRNA polymerase sigma-70 factor, putative4e-1583.2
NC_014220:1670000:1685266168526616863511086Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily7e-1582.4
NC_012034:802453:8024538024538037061254Anaerocellum thermophilum DSM 6725, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily8e-1479
NC_019970:1991944:1999871199987120009441074Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRNA polymerase, sigma 70 subunit, RpoD1e-1378.6
NC_015555:863173:8722008722008732731074Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-1378.2
NC_010296:5002428:5008809500880950100591251Microcystis aeruginosa NIES-843, complete genomeRNA polymerase sigma factor RpoD2e-1377.4
NC_021182:2219286:2228867222886722299881122Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, sigma-70 family5e-1376.3
NC_009482:87193:958219582196795975Synechococcus sp. RCC307 chromosome, complete genomesigma-70 family RNA polymerase sigma factor4e-1376.3
NC_014393:1782811:1798057179805717991481092Clostridium cellulovorans 743B chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily7e-1375.9
NC_008702:1153344:117263311726331173568936Azoarcus sp. BH72, complete genomeputative RNA polymerase sigma factor2e-1273.9
NC_015672:2236000:225557622555762256508933Flexistipes sinusarabici DSM 4947 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit3e-1273.6
NC_013510:2782240:2799999279999928013331335Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily6e-1272.8
NC_008262:2169262:2181235218123521823351101Clostridium perfringens SM101, complete genomeRNA polymerase sigma factor RpoD7e-1272.4
NC_008312:6801445:6821260682126068224141155Trichodesmium erythraeum IMS101, complete genomeRNA polymerase, sigma 28 subunit7e-1272.4
NC_003366:2286083:2298082229808222992031122Clostridium perfringens str. 13, complete genomeRNA polymerase sigma factor8e-1272
NC_006322:2592176:2607296260729626084171122Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sigma factor1e-1172
NC_009454:1246393:126549412654941266273780Pelotomaculum thermopropionicum SI, complete genomeDNA-directed RNA polymerase specialized sigma subunit1e-1171.6
NC_009930:4909:293182931830124807Acaryochloris marina MBIC11017 plasmid pREB5, complete sequenceRNA polymerase sigma-70 factor1e-1171.6
NC_008054:1030994:1053267105326710543851119Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRNA polymerase sigma factor RpoD (Sigma-A)2e-1171.2
NC_011761:2067695:208789920878992088756858Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeRNA polymerase sigm-70 factor family2e-1171.2
NC_010723:915697:9156979156979168211125Clostridium botulinum E3 str. Alaska E43, complete genomeRNA polymerase sigma factor RpoD2e-1170.9
NC_008529:1042220:1071584107158410727021119Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)2e-1170.5
NC_016625:1259778:1274704127470412769172214Burkholderia sp. YI23 chromosome 2, complete sequenceRNA polymerase sigma-70 subunit RpoD4e-1170.1
NC_007650:722961:7258447258447282462403Burkholderia thailandensis E264 chromosome II, complete sequenceRNA polymerase sigma factor RpoD4e-1170.1
NC_010805:530876:5350295350295374432415Burkholderia multivorans ATCC 17616 chromosome 2, completeRNA polymerase primary sigma factor4e-1170.1
NC_010086:1907959:1937861193786119402752415Burkholderia multivorans ATCC 17616 chromosome 2, completeRNA polymerase, sigma 70 subunit, RpoD4e-1170.1
NC_007435:1077792:1089393108939310917952403Burkholderia pseudomallei 1710b chromosome II, complete sequenceRNA polymerase sigma factor4e-1170.1
NC_009075:2428248:2436729243672924389392211Burkholderia pseudomallei 668 chromosome II, complete sequenceRNA polymerase sigma factor RpoD4e-1170.1
NC_013525:1953920:1974765197476519765551791Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-1170.1
NC_006270:2591317:2606437260643726075581122Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sigma factor3e-1170.1
NC_015138:1582458:1597787159778716001292343Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeRNA polymerase sigma-70 subunit RpoD3e-1170.1
NC_009255:1071868:1076072107607210785012430Burkholderia vietnamiensis G4 chromosome 2, complete sequenceRNA polymerase sigma factor RpoD3e-1170.1
NC_009831:1539159:154015015401501541121972Shewanella sediminis HAW-EB3, complete genomeRNA polymerase, sigma 70 subunit, RpoD family3e-1170.1
NC_010552:752007:7562057562057586222418Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceRNA polymerase, sigma 70 subunit, RpoD3e-1170.1
NC_008752:1523768:1541468154146815438132346Acidovorax avenae subsp. citrulli AAC00-1, complete genomeRNA polymerase, sigma 70 subunit, RpoD family3e-1170.1
NC_016782:1385800:141846314184631419452990Corynebacterium diphtheriae 241 chromosome, complete genomeRNA polymerase sigma factor B4e-1169.7
NC_002935:1378566:143012114301211431110990Corynebacterium diphtheriae NCTC 13129, complete genomeRNA polymerase sigma factor4e-1169.7
NC_009078:2351046:2359522235952223617322211Burkholderia pseudomallei 1106a chromosome II, complete sequenceRNA polymerase sigma factor RpoD4e-1169.7
NC_016789:1432000:146396714639671464956990Corynebacterium diphtheriae PW8 chromosome, complete genomeRNA polymerase sigma factor B5e-1169.7
NC_016783:1397975:143905514390551440044990Corynebacterium diphtheriae INCA 402 chromosome, complete genomeRNA polymerase sigma factor B5e-1169.7
NC_006351:2398403:2406884240688424089262043Burkholderia pseudomallei K96243 chromosome 2, complete sequenceRNA polymerase sigma factor5e-1169.7
NC_011891:3004000:301729530172953018263969Anaeromyxobacter dehalogenans 2CP-1, complete genomeRNA polymerase, sigma 32 subunit, RpoH5e-1169.7
NC_016785:1357500:139661513966151397604990Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeRNA polymerase sigma factor B4e-1169.7
NC_016786:1359064:141872814187281419717990Corynebacterium diphtheriae HC01 chromosome, complete genomeRNA polymerase sigma factor B4e-1169.7
NC_015589:3085442:308799830879983088780783Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRNA polymerase sigma-F factor4e-1169.7
NC_016802:1317365:140325414032541404243990Corynebacterium diphtheriae HC02 chromosome, complete genomeRNA polymerase sigma factor B4e-1169.7
NC_016801:1422500:146025714602571461246990Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeRNA polymerase sigma factor B4e-1169.7
NC_016800:1411000:144660414466041447593990Corynebacterium diphtheriae BH8 chromosome, complete genomeRNA polymerase sigma factor B4e-1169.7
NC_016790:1345638:138610813861081387097990Corynebacterium diphtheriae VA01 chromosome, complete genomeRNA polymerase sigma factor B4e-1169.7
NC_016788:1376000:141350614135061414495990Corynebacterium diphtheriae HC04 chromosome, complete genomeRNA polymerase sigma factor B4e-1169.7
NC_016787:1350676:141004114100411411030990Corynebacterium diphtheriae HC03 chromosome, complete genomeRNA polymerase sigma factor B4e-1169.7
NC_012721:1986436:2004708200470820071252418Burkholderia glumae BGR1 chromosome 2, complete genomeRNA polymerase, sigma 70 subunit, RpoD family protein5e-1169.3
NC_016626:1669477:1686194168619416881401947Burkholderia sp. YI23 plasmid byi_1p, complete sequenceRNA polymerase sigma-70 subunit RpoD8e-1168.9
NC_013961:851044:852228852228853220993Erwinia amylovora, complete genomeRNA polymerase sigma factor rpoS1e-1068.6
NC_015856:1182974:1198779119877912012742496Collimonas fungivorans Ter331 chromosome, complete genomeRNA polymerase sigma factor1e-1068.6
NC_007760:1415663:141749914174991418467969Anaeromyxobacter dehalogenans 2CP-C, complete genomesigma 32 (RpoH)1e-1068.6
NC_010694:2971170:299977329997733000765993Erwinia tasmaniensis, complete genomeRNA polymerase sigma factor RpoS1e-1068.6
NC_005125:182701:1947391947391958091071Gloeobacter violaceus PCC 7421, complete genomegroup 2 sigma 70-type sigma factor1e-1068.6
NC_004578:1719849:1727080172708017280871008Pseudomonas syringae pv. tomato str. DC3000, complete genomeRNA polymerase sigma factor1e-1068.2
NC_014323:961825:9651409651409676922553Herbaspirillum seropedicae SmR1 chromosome, complete genomeRNA polymerase sigma-70 factor transcription regulator protein1e-1068.2
NC_012968:2228943:2243624224362422455641941Methylotenera mobilis JLW8, complete genomeRNA polymerase, sigma 70 subunit, RpoD2e-1067.8
NC_009659:543000:5459655459655484452481Janthinobacterium sp. Marseille chromosome, complete genomeRNA polymerase primary sigma factor2e-1067.8
NC_013959:2449315:2470861247086124728251965Sideroxydans lithotrophicus ES-1 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD2e-1067.8
NC_016781:1327516:132751613275161328505990Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeRNA polymerase sigma factor sigB3e-1067.4
NC_016932:1309644:131240113124011313390990Corynebacterium pseudotuberculosis 316 chromosome, complete genomeRNA polymerase sigma factor sigB3e-1067.4
NC_011071:4000620:4024096402409640259521857Stenotrophomonas maltophilia R551-3, complete genomeRNA polymerase, sigma 70 subunit, RpoD2e-1067.4
NC_015164:325212:344338344338345198861Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-1067.4
NC_009614:3476000:349491834949183495778861Bacteroides vulgatus ATCC 8482 chromosome, complete genomeRNA polymerase sigma factor rpoD2e-1067.4
NC_015947:3991696:4005239400523940070921854Burkholderia sp. JV3 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD2e-1067.4
NC_016818:749673:750744750744751730987Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRNA polymerase sigma factor RpoS2e-1067.4
NC_007086:4489153:4499598449959845014721875Xanthomonas campestris pv. campestris str. 8004, complete genomeRNA polymerase sigma factor2e-1067.4
NC_003902:4430621:4442015444201544438891875Xanthomonas campestris pv. campestris str. ATCC 33913, completeRNA polymerase sigma factor RpoD2e-1067.4
NC_007508:4476726:4490897449089744927741878Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeRNA polymerase sigma factor2e-1067.4
NC_012918:2758775:279005027900502791027978Geobacter sp. M21 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit3e-1067
NC_014314:755166:7722247722247737321509Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeRNA polymerase sigma 70 subunit RpoD subfamily3e-1067
NC_009482:2109270:2130734213073421318461113Synechococcus sp. RCC307 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-1067
NC_018677:111500:1414281414281431641737Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeRNA polymerase sigma factor RpoD4e-1066.6
NC_007298:2689731:271902027190202719949930Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma factor4e-1066.6
NC_014118:2316000:2320588232058823225851998Burkholderia sp. CCGE1002 chromosome chromosome 2, completeRNA polymerase, sigma 70 subunit, RpoD4e-1066.2
NC_017033:276741:2903512903512922311881Frateuria aurantia DSM 6220 chromosome, complete genomesigma-70 family RNA polymerase sigma factor7e-1065.9
NC_014484:1163576:1170458117045811722001743Spirochaeta thermophila DSM 6192 chromosome, complete genomeRNA polymerase sigma factor7e-1065.9
NC_014220:837926:842737842737843507771Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily7e-1065.9
NC_017511:602000:6167016167016186291929Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeRNA polymerase sigma factor RpoD1e-0965.5
NC_017518:1610803:1612761161276116146891929Neisseria meningitidis NZ-05/33 chromosome, complete genomeRNA polymerase sigma factor rpoD9e-1065.5
NC_013016:1441424:1443383144338314453111929Neisseria meningitidis alpha14 chromosome, complete genomeRNA polymerase sigma factor RpoD9e-1065.5
NC_013894:1380564:140102114010211401953933Thermocrinis albus DSM 14484 chromosome, complete genomeputative RNA polymerase, sigma 70 family subunit9e-1065.5
NC_019748:4129500:4144777414477741460271251Stanieria cyanosphaera PCC 7437, complete genomeRNA polymerase, sigma subunit, RpsC/SigC8e-1065.5
NC_003228:3212500:321592932159293216789861Bacteroides fragilis NCTC 9343, complete genomeputative sigma factor A1e-0965.1
NC_009074:94000:1169431169431183911449Burkholderia pseudomallei 668 chromosome I, complete sequenceRNA polymerase sigma factor RpoD1e-0965.1
NC_007410:112074:126026126026126970945Anabaena variabilis ATCC 29413 plasmid A, complete sequenceSigma-701e-0965.1
NC_015557:1412917:1423520142352014252561737Hydrogenobaculum sp. 3684 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-0965.1
NC_015587:1414304:1423388142338814251241737Hydrogenobaculum sp. SHO chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-0965.1
NC_007604:1586243:161346416134641614396933Synechococcus elongatus PCC 7942, complete genomeprincipal RNA polymerase sigma factor SigA2e-0964.7
NC_002971:1523065:1541273154127315433692097Coxiella burnetii RSA 493, complete genomeRNA polymerase sigma factor RpoD2e-0964.7
NC_009727:357206:3772503772503793462097Coxiella burnetii Dugway 7E9-12, complete genomeRNA polymerase sigma factor RpoD2e-0964.7
NC_011126:1430608:1443052144305214447881737Hydrogenobaculum sp. Y04AAS1, complete genomeRNA polymerase, sigma 70 subunit, RpoD family1e-0964.7
NC_020291:1389114:139335713933571394130774Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma-G factor SigG1e-0964.7
NC_006576:12230:144341443415384951Synechococcus elongatus PCC 6301, complete genomegroup2 RNA polymerase sigma factor RpoD62e-0964.3
NC_016593:2370000:239025823902582391010753Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeRNA polymerase sigma-F factor2e-0964.3
NC_011661:1332309:1332309133230913335501242Dictyoglomus turgidum DSM 6724, complete genomeputative RNA polymerase, sigma 70 family subunit2e-0964.3
NC_012668:62500:6800568005699331929Vibrio cholerae MJ-1236 chromosome 1, complete sequenceRNA polymerase sigma factor RpoD2e-0964.3
NC_014562:2563466:260248826024882603480993Pantoea vagans C9-1 chromosome, complete genomeRNA polymerase sigma factor rpoD2e-0963.9
NC_009053:1668500:1688201168820116900601860Actinobacillus pleuropneumoniae L20, complete genomeRNA polymerase sigma factor 703e-0963.5
NC_010278:1625695:1649248164924816511071860Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,RNA polymerase sigma factor RpoD3e-0963.5
NC_009512:469000:4860034860034878531851Pseudomonas putida F1, complete genomeRNA polymerase, sigma 70 subunit, RpoD4e-0963.5
NC_016629:3396500:3420075342007534218591785Desulfovibrio africanus str. Walvis Bay chromosome, completeRpoD subfamily RNA polymerase sigma-70 subunit4e-0963.5
NC_007516:2383097:2407948240794824090811134Synechococcus sp. CC9605, complete genomepossible type II alternative RNA polymerase sigma factor5e-0963.2
NC_015733:443122:4575524575524594021851Pseudomonas putida S16 chromosome, complete genomeRNA polymerase sigma factor RpoD4e-0963.2
NC_007509:644000:6590416590416610742034Burkholderia sp. 383 chromosome 3, complete sequencesigma 70 (RpoD)4e-0963.2
NC_011761:2067695:2080861208086120827351875Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeRNA polymerase sigma factor RpoD4e-0963.2
NC_011244:746801:7669497669497688411893Borrelia recurrentis A1, complete genomeRNA polymerase sigma factor RpoD4e-0963.2
NC_010939:1633000:1651959165195916538181860Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeRNA polymerase sigma factor 704e-0963.2
NC_002505:514732:5504075504075522841878Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeRNA polymerase sigma factor4e-0963.2
NC_016445:2938887:2961443296144329633201878Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeRNA polymerase primary sigma factor4e-0963.2
NC_016602:3122700:3127558312755831294441887Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceRNA polymerase sigma factor RpoD5e-0962.8
NC_017195:2273216:229212822921282292895768Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeRNA polymerase sigma-F factor8e-0962.4
NC_008710:703740:7526687526687545601893Borrelia turicatae 91E135, complete genomeRNA polymerase sigma factor RpoD7e-0962.4
NC_010673:703816:7554327554327573241893Borrelia hermsii DAH, complete genomeRNA polymerase sigma factor RpoD6e-0962.4
NC_016816:674171:6861796861796880231845Pantoea ananatis LMG 5342, complete genomeRNA polymerase sigma factor RpoD8e-0962
NC_017160:676249:6950996950996961571059Yersinia pestis D182038 chromosome, complete genomeRNA polymerase sigma factor RpoD9e-0962
NC_014657:914071:916231916231917052822Caldicellulosiruptor owensensis OL chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod subfamily1e-0862
NC_009434:796878:8138468138468155551710Pseudomonas stutzeri A1501, complete genomeRNA polymerase sigma factor RpoD1e-0861.6
NC_007947:2447635:2479188247918824811221935Methylobacillus flagellatus KT, complete genomesigma 70 (RpoD)1e-0861.6
NC_007645:6407370:6411603641160364135221920Hahella chejuensis KCTC 2396, complete genomeRNA polymerase sigma-70 factor RpoD1e-0861.6
NC_009952:2381601:2381601238160123835951995Dinoroseobacter shibae DFL 12, complete genomeRNA polymerase sigma factor1e-0861.6
NC_007651:72952:9341493414948651452Burkholderia thailandensis E264 chromosome I, complete sequenceRNA polymerase sigma factor RpoD2e-0861.2
NC_016513:1761830:1782400178240017842501851Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDNA-directed RNA polymerase sigma subunit RpoD2e-0860.8
NC_014837:3739408:3746389374638937482331845Pantoea sp. At-9b chromosome, complete genomeRNA polymerase,sigma 70 subunit,RpoD2e-0860.8
NC_013416:1429881:1448118144811814499681851Aggregatibacter actinomycetemcomitans D11S-1, complete genomeRNA polymerase sigma factor RpoD (Sigma-70)2e-0860.8
NC_015379:6226661:6226661622666162285081848Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,RNA polymerase sigma factor (sigma-70)2e-0860.8
NC_007974:1135863:1146392114639211482451854Ralstonia metallidurans CH34 chromosome 2, complete sequencesigma 70 (RpoD)3e-0860.5
NC_012918:1814000:1815755181575518167561002Geobacter sp. M21 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit3e-0860.5
NC_015224:3892972:3894878389487838967161839Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,RNA polymerase sigma factor RpoD3e-0860.5
NC_008149:587689:6087836087836106211839Yersinia pestis Nepal516, complete genomeRNA polymerase sigma factor RpoD3e-0860.5
NC_009708:633054:6495746495746514121839Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRNA polymerase sigma factor RpoD3e-0860.5
NC_014029:729675:7507627507627526001839Yersinia pestis Z176003 chromosome, complete genomeRNA polymerase sigma factor RpoD3e-0860.5
NC_017154:671816:6929146929146947521839Yersinia pestis D106004 chromosome, complete genomeRNA polymerase sigma factor RpoD3e-0860.5
NC_008800:4013298:4019198401919840210361839Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,RNA polymerase sigma factor RpoD3e-0860.5
NC_009439:4404942:4404942440494244067891848Pseudomonas mendocina ymp, complete genomeRNA polymerase sigma factor RpoD4e-0860.1
NC_014761:1321187:1321187132118713226411455Oceanithermus profundus DSM 14977 chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod subfamily4e-0860.1
NC_008820:2595500:2614605261460526157351131Prochlorococcus marinus str. MIT 9303, complete genomePutative type II alternative RNA polymerase sigma factor4e-0860.1
NC_007005:5500196:5502219550221955040691851Pseudomonas syringae pv. syringae B728a, complete genomeRNA polymerase sigma factor4e-0860.1
NC_014733:2363838:2377778237777823796941917Methylovorus sp. MP688 chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod3e-0860.1
NC_012969:2476318:2508883250888325107991917Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD3e-0860.1
NC_004578:568236:5888465888465906961851Pseudomonas syringae pv. tomato str. DC3000, complete genomeRNA polymerase sigma factor3e-0860.1
NC_010995:2547164:2553509255350925545161008Cellvibrio japonicus Ueda107, complete genomeRNA polymerase sigma factor RpoS4e-0859.7
NC_009380:1663545:166747116674711668469999Salinispora tropica CNB-440 chromosome, complete genomeRNA polymerase sigma factor SigB5e-0859.7
NC_004545:15650:5831358313601421830Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeRNA polymerase sigma factor RpoD7e-0859.3
NC_014623:7331860:7336519733651973386392121Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRNA polymerase sigma factor rpod6e-0859.3
NC_008463:632869:6471916471916490441854Pseudomonas aeruginosa UCBPP-PA14, complete genomesigma factor RpoD6e-0859.3
NC_014618:690056:7265327265327283761845Enterobacter cloacae SCF1 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD6e-0859.3
NC_010676:2869936:2882060288206028840571998Burkholderia phytofirmans PsJN chromosome 2, complete sequenceRNA polymerase, sigma 70 subunit, RpoD7e-0858.9
NC_007912:909112:9259819259819278221842Saccharophagus degradans 2-40, complete genomeputative transcriptional regulator, Fis family7e-0858.9
NC_016799:1439000:147027314702731471262990Corynebacterium diphtheriae 31A chromosome, complete genomeRNA polymerase sigma factor B9e-0858.9
NC_007517:1561466:158865115886511589631981Geobacter metallireducens GS-15, complete genomesigma 28 (Flagella/Sporulation)1e-0758.5
NC_013171:1194500:1219236121923612210441809Anaerococcus prevotii DSM 20548, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-0758.5
NC_015663:770485:7723817723817742251845Enterobacter aerogenes KCTC 2190 chromosome, complete genomeRNA polymerase sigma factor RpoD9e-0858.5
NC_008260:2340824:2350147235014723520481902Alcanivorax borkumensis SK2, complete genomeRNA polymerase sigma factor RpoD2e-0757.8
NC_007413:1405817:1426867142686714281171251Anabaena variabilis ATCC 29413, complete genomeRNA polymerase sigma-like factor2e-0757.8
NC_015713:2453409:2453409245340924550731665Simkania negevensis Z chromosome gsn.131, complete genomerNA polymerase sigma factor rpoD3e-0757.4
NC_012751:1538500:1553846155384615548531008Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeRNA polymerase, sigma S (sigma 38) factor3e-0757
NC_011146:3089297:3106852310685231078531002Geobacter bemidjiensis Bem, complete genomeRNA polymerase, sigma 70 subunit, RpoD family3e-0757
NC_014377:1227850:123522212352221235947726Thermosediminibacter oceani DSM 16646 chromosome, complete genomeRNA polymerase, sigma subunit, RpoX/SigF4e-0756.6
NC_009831:1255995:1273107127310712749451839Shewanella sediminis HAW-EB3, complete genomeRNA polymerase, sigma 70 subunit, RpoD family4e-0756.6
NC_009091:1598044:1616615161661516176341020Prochlorococcus marinus str. MIT 9301, complete genomeType II alternative RNA polymerase sigma factor, sigma-70 family5e-0756.2
NC_014330:697429:713067713067713921855Brachyspira pilosicoli 95/1000 chromosome, complete genomeDNA directed RNA polymerase sigma subunit6e-0756.2
NC_019908:2496149:250468525046852505539855Brachyspira pilosicoli P43/6/78 chromosome, complete genomeDNA directed RNA polymerase sigma subunit6e-0756.2
NC_014448:487381:5041035041035056771575Mycoplasma hyorhinis HUB-1 chromosome, complete genomeRNA polymerase sigma factor6e-0755.8
NC_008578:591357:595878595878596741864Acidothermus cellulolyticus 11B, complete genomeRNA polymerase, sigma 28 subunit9e-0755.5
NC_020409:168916:180363180363181148786Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeRNA polymerase sigma factor for flagellar operon1e-0655.1
NC_015318:249445:2540152540152554901476Hippea maritima DSM 10411 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-0655.1
NC_009483:3024115:3042895304289530439051011Geobacter uraniireducens Rf4 chromosome, complete genomeRpoD family RNA polymerase sigma factor1e-0654.7
NC_005042:1719055:1722731172273117237501020Prochlorococcus marinus subsp. marinus str. CCMP1375, completeDNA-directed RNA polymerase sigma subunit2e-0654.7
NC_005070:2374850:239942623994262400412987Synechococcus sp. WH 8102, complete genomeType II alternative RNA polymerase sigma factor, sigma-70 family2e-0654.3
NC_014962:4479989:449534144953414496174834Isosphaera pallida ATCC 43644 chromosome, complete genomeRNA polymerase sigma-38 subunit RpoS2e-0654.3
NC_021184:2238500:225056522505652251368804Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, FliA/WhiG family3e-0653.9
NC_016781:1297782:1320469132046913220221554Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeRNA polymerase sigma factor rpoD3e-0653.9
NC_017303:1297793:1320477132047713220301554Corynebacterium pseudotuberculosis I19 chromosome, complete genomeRNA polymerase sigma factor rpoD3e-0653.9
NC_013165:2440883:245653524565352457479945Slackia heliotrinireducens DSM 20476, complete genomeRNA polymerase sigma factor, sigma-70 family3e-0653.9
NC_011969:3627980:365313136531313654000870Bacillus cereus Q1 chromosome, complete genomesporulation sigma factor sigg2e-0653.9
NC_018677:111500:115439115439116281843Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeRNA polymerase sigma factor RpoH4e-0653.5
NC_018507:115346:121872121872122714843Candidatus Portiera aleyrodidarum BT-B chromosome, complete genomeRNA polymerase sigma-32 subunit RpoH4e-0653.5
NC_008054:1030994:1052095105209510532311137Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRNA polymerase sigma factor4e-0653.5
NC_007498:1666242:1677244167724416782871044Pelobacter carbinolicus DSM 2380, complete genomeDNA-directed RNA polymerase, sigma 70/sigma 32 subunit3e-0653.5
NC_016790:1345638:1379067137906713805871521Corynebacterium diphtheriae VA01 chromosome, complete genomeRNA polymerase sigma factor A4e-0653.1
NC_016788:1376000:1406465140646514079851521Corynebacterium diphtheriae HC04 chromosome, complete genomeRNA polymerase sigma factor A4e-0653.1
NC_008529:1042220:1070412107041210715481137Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)4e-0653.1
NC_002935:1378566:1423091142309114245991509Corynebacterium diphtheriae NCTC 13129, complete genomeRNA polymerase sigma factor4e-0653.1
NC_007298:778723:816228816228816974747Dechloromonas aromatica RCB, complete genomeSigma-70 region 44e-0653.1
NC_011296:909558:9211909211909226291440Thermodesulfovibrio yellowstonii DSM 11347, complete genomeRNA polymerase sigma factor RpoD6e-0652.8
NC_009465:90000:1217341217341235451812Candidatus Vesicomyosocius okutanii HA, complete genomeDNA-directed RNA polymerase sigma-70 factor6e-0652.8
NC_010001:3266561:327511932751193275883765Clostridium phytofermentans ISDg, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG8e-0652.4
NC_016787:1350676:1402928140292814045201593Corynebacterium diphtheriae HC03 chromosome, complete genomeRNA polymerase sigma factor A7e-0652.4
NC_016782:1385800:1411361141136114129411581Corynebacterium diphtheriae 241 chromosome, complete genomeRNA polymerase sigma factor A7e-0652.4
NC_016783:1397975:1431953143195314335331581Corynebacterium diphtheriae INCA 402 chromosome, complete genomeRNA polymerase sigma factor A7e-0652.4
NC_016785:1357500:1389513138951313910931581Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeRNA polymerase sigma factor A7e-0652.4
NC_016786:1359064:1411626141162614132061581Corynebacterium diphtheriae HC01 chromosome, complete genomeRNA polymerase sigma factor A7e-0652.4
NC_016799:1439000:1463172146317214647521581Corynebacterium diphtheriae 31A chromosome, complete genomeRNA polymerase sigma factor A7e-0652.4
NC_016801:1422500:1453156145315614547361581Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeRNA polymerase sigma factor A7e-0652.4
NC_016802:1317365:1396152139615213977321581Corynebacterium diphtheriae HC02 chromosome, complete genomeRNA polymerase sigma factor A7e-0652.4
NC_014538:1311500:133260513326051333345741Thermoanaerobacter sp. X513 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily7e-0652.4
NC_003155:883500:890067890067890906840Streptomyces avermitilis MA-4680, complete genomeRNA polymerase sigma factor7e-0652.4
NC_020411:905335:906699906699907436738Hydrogenobaculum sp. HO, complete genomeRNA polymerase, sigma 28 subunit, SigD/FliA/WhiG7e-0652.4
NC_015587:905255:906619906619907356738Hydrogenobaculum sp. SHO chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG7e-0652.4
NC_015557:905145:906509906509907246738Hydrogenobaculum sp. 3684 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG7e-0652.4
NC_016894:2931213:293121329312132932046834Acetobacterium woodii DSM 1030 chromosome, complete genomeRNA polymerase, sigma 28 subunit FliA7e-0652.4
NC_009523:2769154:2779011277901127802071197Roseiflexus sp. RS-1 chromosome, complete genomeRNA polymerase sigma-32 subunit RpoH7e-0652.4
NC_016800:1411000:1439503143950314410831581Corynebacterium diphtheriae BH8 chromosome, complete genomeRNA polymerase sigma factor A8e-0652.4