Pre_GI: BLASTP Hits

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Query: NC_009901:3317068:3322370 Shewanella pealeana ATCC 700345, complete genome

Start: 3322370, End: 3323242, Length: 873

Host Lineage: Shewanella pealeana; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This species was isolated from a microbial community colonizing the accessory nidamental gland of the squid Loligo peali (Atlantic squid) for their capacity to respire on sulfur. It was placed in the Shewanella genus based on physiological and biochemical characteristics and 16S rRNA sequence analysis. Shewanella are ubiquitous in marine environment and play very important role in global carbon and nitrogen cycle. The present strain is moderately halophilic, requiring sodium ions for growth. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014934:4834000:483478048347804835673894Cellulophaga algicola DSM 14237 chromosome, complete genometranscriptional regulator, arac family1e-1687
NC_016609:4233701:424485042448504245719870Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator5e-1582
NC_014041:1395761:140434314043431404846504Zunongwangia profunda SM-A87 chromosome, complete genome4-hydroxyphenylacetate catabolism regulatory protein HpaA1e-1377
NC_009441:3522519:353988035398803540680801Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein2e-1376.6
NC_013730:4502965:452028045202804521137858Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family5e-1272
NC_014622:724000:725554725554726447894Paenibacillus polymyxa SC2 chromosome, complete genometranscriptional regulator4e-1272
NC_016582:1639375:165691016569101657806897Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transcriptional regulator2e-1169.7
NC_004663:2437760:247120524712052472053849Bacteroides thetaiotaomicron VPI-5482, complete genometranscriptional regulator3e-1169.3
NC_017986:5605197:563115756311575632029873Pseudomonas putida ND6 chromosome, complete genomeHelix-turn-helix domain-containing protein3e-1169.3
NC_015164:1952500:195627119562711957128858Bacteroides salanitronis DSM 18170 chromosome, complete genometranscriptional regulator, AraC family4e-1168.9
NC_013730:4811911:482916548291654830043879Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family3e-1168.9
NC_016776:3973428:398739639873963988241846Bacteroides fragilis 638R, complete genomeputative AraC-family regulatory protein6e-1168.2
NC_003228:3934770:394874239487423949587846Bacteroides fragilis NCTC 9343, complete genomeputative AraC-family regulatory protein6e-1168.2
NC_013730:778076:782821782821783741921Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family9e-1167.8
NC_006347:4031000:404498540449854045563579Bacteroides fragilis YCH46, complete genometranscriptional regulator1e-1067.4
NC_010468:4059436:405943640594364060326891Escherichia coli ATCC 8739, complete genometranscriptional regulator, AraC family1e-1067
NC_004547:1873390:188300518830051883862858Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator2e-1066.2
NC_003228:793846:809965809965810840876Bacteroides fragilis NCTC 9343, complete genomeputative AraC-family regulatory protein5e-1065.5
NC_016776:844641:860760860760861635876Bacteroides fragilis 638R, complete genomeputative AraC-family regulatory protein5e-1065.5
NC_006347:854301:873322873322874197876Bacteroides fragilis YCH46, complete genomehypothetical protein5e-1065.5
NC_015434:1885373:188757818875781888468891Verrucosispora maris AB-18-032 chromosome, complete genomehelix-turn-helix, arac domain-containing protein5e-1065.1
NC_004663:1365429:137704613770461377882837Bacteroides thetaiotaomicron VPI-5482, complete genomeAraC-type transcription regulator1e-0963.9
NC_009615:919495:925663925663926541879Parabacteroides distasonis ATCC 8503 chromosome, complete genometranscriptional regulator2e-0963.2
NC_014815:2055286:205897420589742059891918Micromonospora sp. L5 chromosome, complete genomehelix-turn-helix, arac domain protein2e-0963.2
NC_014391:1812500:181434718143471815264918Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein2e-0963.2
NC_006347:2375480:238632923863292387168840Bacteroides fragilis YCH46, complete genomeAraC-type transcription regulator3e-0962.4
NC_003228:2437288:244229724422972443136840Bacteroides fragilis NCTC 9343, complete genomeputative AraC-type transcriptional regulator3e-0962.4
NC_016776:2516149:252699725269972527836840Bacteroides fragilis 638R, complete genomeputative AraC-type transcriptional regulator4e-0962.4
NC_004129:926479:934135934135934989855Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family5e-0962
NC_003228:2473956:247395624739562474882927Bacteroides fragilis NCTC 9343, complete genomeputative AraC family transcriptional regulator5e-0962
NC_012880:1585255:160704616070461608035990Dickeya dadantii Ech703, complete genometranscriptional regulator, AraC family6e-0961.6
NC_014933:3856561:387760838776083878456849Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family7e-0961.6
NC_015947:1937341:195358619535861954440855Burkholderia sp. JV3 chromosome, complete genomeAraC family transcriptional regulator9e-0960.8
NC_012962:1041518:106408610640861064976891Photorhabdus asymbiotica, complete genomeregulator of the 4hpa-hydroxylase operon1e-0860.8
NC_014933:979063:983963983963984871909Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family1e-0860.5
NC_020054:465413:482880482880483734855Fibrella aestuarina BUZ 2 drat genometranscriptional regulator, AraC family2e-0860.1
NC_013730:4502965:452139745213974522266870Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family2e-0859.7
NC_013132:705314:708270708270709112843Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family3e-0859.7
NC_002950:1511955:153145315314531532301849Porphyromonas gingivalis W83, complete genometranscriptional regulator, AraC family3e-0859.3
NC_002950:879930:883361883361884209849Porphyromonas gingivalis W83, complete genometranscriptional regulator, AraC family3e-0859.3
NC_016609:1305570:130853413085341309397864Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator4e-0858.9
NC_016609:2730449:273712227371222738024903Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator4e-0858.9
NC_009441:4218434:423875042387504239445696Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein5e-0858.5
NC_005085:2774370:278650327865032787291789Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein5e-0858.5
NC_013730:4811911:482723048272304828150921Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family7e-0858.2
NC_010623:1961685:201867520186752019634960Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family7e-0858.2
NC_003228:3085793:308968830896883090575888Bacteroides fragilis NCTC 9343, complete genomeputative AraC-family transcriptional regulator1e-0757.4
NC_015376:1752883:177295817729581773878921Burkholderia gladioli BSR3 chromosome chromosome 2, completeAraC family transcriptional regulator1e-0757.4
NC_013730:4399643:440355544035554404475921Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family1e-0757
NC_014655:2366201:237290323729032373763861Leadbetterella byssophila DSM 17132 chromosome, complete genometranscriptional regulator, arac family1e-0757
NC_019968:1084288:110312511031251103973849Prevotella dentalis DSM 3688 chromosome 2, complete sequenceDNA-binding domain-containing protein, AraC-type2e-0756.6
NC_016609:606000:606363606363607280918Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator2e-0756.6
NC_016609:6022778:603476460347646035642879Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator2e-0756.6
NC_015311:2626850:264619326461932647041849Prevotella denticola F0289 chromosome, complete genomeAraC family transcriptional regulator2e-0756.2
NC_016609:606000:608282608282609205924Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator3e-0755.8
NC_013132:3081806:308538930853893086222834Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family4e-0755.5
NC_004547:1837500:184938418493841850334951Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator4e-0755.5
NC_010338:4148667:416203941620394162932894Caulobacter sp. K31, complete genometranscriptional regulator, AraC family6e-0755.1
NC_013960:243884:2548952548952559321038Nitrosococcus halophilus Nc4 chromosome, complete genomehelix-turn-helix domain-containing protein AraC type6e-0755.1
NC_020054:3132478:313830531383053139264960Fibrella aestuarina BUZ 2 drat genometranscriptional regulator, AraC family6e-0755.1
NC_013730:4573077:458463145846314585539909Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family5e-0755.1
NC_016935:2347691:2401895240189524035051611Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein8e-0754.7
NC_015690:1818333:1872120187212018737301611Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYbbB8e-0754.7
NC_013037:1015210:103550010355001036360861Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, AraC family9e-0754.3
NC_015703:4483500:451260045126004513517918Runella slithyformis DSM 19594 chromosome, complete genomeAraC family transcriptional regulator9e-0754.3
NC_019960:1658657:173379017337901734695906Prevotella dentalis DSM 3688 chromosome 1, complete sequenceDNA-binding domain-containing protein, AraC-type1e-0653.9
NC_016609:606000:611143611143612063921Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator1e-0653.9
NC_013406:3926531:3943386394338639450111626Paenibacillus sp. Y412MC10 chromosome, complete genometwo component AraC family transcriptional regulator2e-0653.5
NC_009441:5248791:526511952651195265988870Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0653.5
NC_004663:3680974:369676236967623697673912Bacteroides thetaiotaomicron VPI-5482, complete genomeputative transcriptional regulator2e-0653.1
NC_013132:6385223:640559164055916406514924Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family2e-0653.1
NC_015277:5211779:523235752323575233280924Sphingobacterium sp. 21 chromosome, complete genometranscriptional regulator, AraC family2e-0653.1
NC_004663:2246756:224892422489242249814891Bacteroides thetaiotaomicron VPI-5482, complete genomeputative transcriptional regulator2e-0653.1
NC_013406:3819577:3837326383732638390081683Paenibacillus sp. Y412MC10 chromosome, complete genometwo component AraC family transcriptional regulator4e-0652.4
NC_013132:4355363:439114343911434392060918Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family5e-0652
NC_012914:2360989:2375383237538323769751593Paenibacillus sp. JDR-2, complete genometwo component transcriptional regulator, AraC family5e-0652
NC_016114:7282882:730901673090167309861846Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeAraC family transcriptional regulator5e-0652