Pre_GI: BLASTP Hits

Some Help

Query: NC_009882:100000:119745 Rickettsia rickettsii str. 'Sheila Smith', complete genome

Start: 119745, End: 120401, Length: 657

Host Lineage: Rickettsia rickettsii; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This strain was isolated from from a patient with Rocky Mountain spotted fever. Causative agent for Rocky Mountain Spotted Fever. This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, are obligate intracellular pathogens and is composed of two groups, the spotted fever group, and the typhus group. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Rickettsia rickettsii was first identified by Dr. Howard Rickets as the causative agent of Rocky Mountain Spotted Fever, which was originally named for its geographic distribution at the time, it is now known to be widespread throughout the North American continent. This bacterium is an obligate intracellular pathogen that infects primarily the vascular endothelium, and occasionally smooth muscle tissue. This bacterium is an obligate intracellular pathogen that infects primarily the vascular endothelium, and occasionally smooth muscle tissue. It is passed to the human host from a tick bite, and the tick acts as both a natural reservoir and a vector for disease transmission. Once the organism is endocytosed by the host cell, it quickly escapes the phagozome, and replicates intracellularly, causing cell death and tissue damage. The disease is characterized by a spotted rash and has a high mortality rate if left untreated.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016914:99184:119924119924120580657Rickettsia rickettsii str. Hino chromosome, complete genomehypothetical protein2e-123441
NC_016909:100000:119794119794120450657Rickettsia rickettsii str. Arizona chromosome, complete genomehypothetical protein2e-123441
NC_016908:100000:119811119811120467657Rickettsia rickettsii str. Colombia chromosome, complete genomehypothetical protein2e-123441
NC_010263:100000:119837119837120493657Rickettsia rickettsii str. Iowa, complete genomehypothetical lipoprotein2e-123441
NC_012633:98000:117851117851118507657Rickettsia africae ESF-5, complete genomehypothetical protein2e-122437
NC_017058:129474:154247154247154903657Rickettsia australis str. Cutlack chromosome, complete genomehypothetical protein3e-116417
NC_009881:92929:119247119247119903657Rickettsia akari str. Hartford, complete genomehypothetical protein7e-115412
NC_017057:83415:101224101224101880657Rickettsia prowazekii str. RpGvF24 chromosome, complete genomehypothetical protein7e-109392
NC_017056:86663:101107101107101763657Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomehypothetical protein7e-109392
NC_017050:83406:101097101097101753657Rickettsia prowazekii str. Katsinyian chromosome, complete genomehypothetical protein7e-109392
NC_000963:83408:101099101099101755657Rickettsia prowazekii str. Madrid E, complete genomehypothetical protein7e-109392
NC_006142:57571:588895888959545657Rickettsia typhi str. Wilmington, complete genomehypothetical protein4e-107387
NC_017066:57571:588895888959545657Rickettsia typhi str. TH1527 chromosome, complete genomehypothetical protein4e-107387
NC_015587:114684:120314120314120925612Hydrogenobaculum sp. SHO chromosome, complete genomeprotein of unknown function DUF3741e-1789.7
NC_015557:114648:120278120278120889612Hydrogenobaculum sp. 3684 chromosome, complete genomeprotein of unknown function DUF3741e-1789.7
NC_020411:114683:120313120313120924612Hydrogenobaculum sp. HO, complete genomeprotein of unknown function DUF3741e-1789.7
NC_015185:1114180:111356711135671114193627Desulfurobacterium thermolithotrophum DSM 11699 chromosome,hypothetical protein3e-1788.2
NC_017082:6321124:634097063409706341683714Bradyrhizobium sp. S23321, complete genomehypothetical protein6e-1477.4
NS_000195:1257834:126174712617471262403657Candidatus Cloacamonas acidaminovoranshypothetical protein6e-1477.4
NC_016629:3308329:332872533287253329396672Desulfovibrio africanus str. Walvis Bay chromosome, completehypothetical protein2e-1376.3
NC_020409:437781:468391468391469038648Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein3e-1272
NC_007759:2858240:286863828686382869420783Syntrophus aciditrophicus SB, complete genomehypothetical lipoprotein2e-1065.9
NC_014365:2888897:290403229040322904727696Desulfarculus baarsii DSM 2075 chromosome, complete genomeprotein of unknown function DUF3744e-0651.6