Pre_GI: BLASTP Hits

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Query: NC_009882:100000:106238 Rickettsia rickettsii str. 'Sheila Smith', complete genome

Start: 106238, End: 106540, Length: 303

Host Lineage: Rickettsia rickettsii; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This strain was isolated from from a patient with Rocky Mountain spotted fever. Causative agent for Rocky Mountain Spotted Fever. This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, are obligate intracellular pathogens and is composed of two groups, the spotted fever group, and the typhus group. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Rickettsia rickettsii was first identified by Dr. Howard Rickets as the causative agent of Rocky Mountain Spotted Fever, which was originally named for its geographic distribution at the time, it is now known to be widespread throughout the North American continent. This bacterium is an obligate intracellular pathogen that infects primarily the vascular endothelium, and occasionally smooth muscle tissue. This bacterium is an obligate intracellular pathogen that infects primarily the vascular endothelium, and occasionally smooth muscle tissue. It is passed to the human host from a tick bite, and the tick acts as both a natural reservoir and a vector for disease transmission. Once the organism is endocytosed by the host cell, it quickly escapes the phagozome, and replicates intracellularly, causing cell death and tissue damage. The disease is characterized by a spotted rash and has a high mortality rate if left untreated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016914:99184:106324106324106626303Rickettsia rickettsii str. Hino chromosome, complete genomepreprotein translocase subunit SecG7e-2095.9
NC_016909:100000:106266106266106568303Rickettsia rickettsii str. Arizona chromosome, complete genomepreprotein translocase subunit SecG7e-2095.9
NC_016908:100000:106271106271106573303Rickettsia rickettsii str. Colombia chromosome, complete genomepreprotein translocase subunit SecG7e-2095.9
NC_010263:100000:106237106237106539303Rickettsia rickettsii str. Iowa, complete genomeprotein translocase subunit7e-2095.9
NC_017058:129474:135396135396135698303Rickettsia australis str. Cutlack chromosome, complete genomepreprotein translocase subunit SecG1e-1995.1
NC_012633:98000:104062104062104364303Rickettsia africae ESF-5, complete genomeProtein-export membrane protein secG5e-1993.2
NC_000963:83408:881648816488466303Rickettsia prowazekii str. Madrid E, complete genomeprotein-export membrane protein1e-1892
NC_017050:83406:881628816288464303Rickettsia prowazekii str. Katsinyian chromosome, complete genomepreprotein translocase subunit SecG1e-1892
NC_017056:86663:881738817388475303Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomepreprotein translocase subunit SecG1e-1892
NC_017057:83415:881718817188473303Rickettsia prowazekii str. RpGvF24 chromosome, complete genomepreprotein translocase subunit SecG1e-1892
NC_009881:92929:9997799977100279303Rickettsia akari str. Hartford, complete genomeprotein-export membrane protein2e-1890.9
NC_017066:57571:732107321073512303Rickettsia typhi str. TH1527 chromosome, complete genomepreprotein translocase subunit SecG5e-1889.7
NC_017062:61500:736277362773929303Rickettsia typhi str. B9991CWPP chromosome, complete genomepreprotein translocase subunit SecG5e-1889.7
NC_006142:57571:732107321073512303Rickettsia typhi str. Wilmington, complete genomeprotein-export membrane protein5e-1889.7
NC_007940:1435701:144165014416501441952303Rickettsia bellii RML369-C, complete genomeProtein-export membrane protein secG9e-1682
NC_009883:140890:152654152654152956303Rickettsia bellii OSU 85-389, complete genomepreprotein translocase subunit SecG9e-1682