Pre_GI: BLASTP Hits

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Query: NC_009837:92000:94303 Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequence

Start: 94303, End: 94704, Length: 402

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. Avian pathogenic Escherichia coli strain isolated from the lung of a chicken clinically diagnosed with colisepticemia. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007606:3755155:3755155375515537563631209Shigella dysenteriae Sd197, complete genomeIS1294 ORF4e-35146
NC_007607:87000:1089721089721101801209Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceIS1294 transposase4e-35146
NC_007607:87000:1145111145111158031293Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceIS1294 transposase6e-35145
NC_007608:97092:1183971183971196051209Shigella boydii Sb227 plasmid pSB4_227, complete sequenceIS1294 transposase6e-34142
NC_017319:192482:211681211681212505825Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceIS1294 transposase2e-29127
NC_004851:191709:2114272114272126231197Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceIS1294 transposase5e-29126
NC_007608:97092:1146531146531158521200Shigella boydii Sb227 plasmid pSB4_227, complete sequenceIS1294 transposase8e-29125
NC_010660:175200:1954511954511966501200Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIS1294, transposase6e-28122
NC_009790:42112:649406494065209270Escherichia coli E24377A plasmid pETEC_74, complete sequenceIS1294, transposase, truncation2e-23107
NC_010660:175200:203362203362203484123Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencetransposase9e-1889
NC_010660:175200:2009632009632021471185Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIS1294, transposase3e-1167.4
NC_013364:1997891:2022346202234620235331188Escherichia coli O111:H- str. 11128, complete genomeputative IS91 transposase3e-0650.4